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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949375
Clone id TST38A01NGRL0005_N05
Library
Length 717
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCAGGTCCTCTGCTCTTCTACGCTCCGCGCTACCTCGGTTTCAACTCCAAGAGCCAAGC
CGCTTGCTTGTTCAACAGCAAACCCACAGTGGATTCCTTCTCAAGAGCCTCTCACCCTGC
TTTGGAGCTCGCTTCATGTGTTCTGTTCCTTCCACCAAGCTCTTCGTTGGAGGTTTGGCA
TGGGGAATGGATGAAAATGCTCTAAGGGATGCTTTTGTTGAATATGGAGAAGTGGTCGAT
GCCAAGGTGGTTCTTGATCGGGATTCTGGAAGATCCAAAGGGTTTGGATTTATCAGCTTT
ACCTGTACAGACCATGCACAAGCAGCCAAGGACAGTATGGATGGAAAATTGCTCAATGGA
AGGACGCTGCGTGTGAATTTTGCCATTGAGAAACAGCGTGTCTTTGGGAATTTTGGAGGA
TATGGAGGCGGAGACTCTGGTGGAAACTCCAGTTTTAGCAGCGGGCAACCTCTGAGTAAT
AGCAGCTTTGGTGACTCTACTAGCCAAGGAAATGACAACTATTTTAGTAACAACACATTC
AACCAGGAAACACTGAACAGTGTTGGTGGCAACAATGAGAGTGGCGATGCATCGAANATG
AAAGATGATTTTTTTGGTGAAGACGCATTTGATGAGGTTGGGGATGATGCATTTGGAAAA
GATGGTGACTTAGCGCAGGGGTATAAATGAGGACCTACAAGGATGTGACGCTCTGAC
■■Homology search results ■■ -
sp_hit_id Q9SVM8
Definition sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana
Align length 81
Score (bit) 103.0
E-value 1.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949375|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N05, 5'
         (717 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho...   103   1e-21
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    91   5e-18
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    91   8e-18
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    91   8e-18
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    91   8e-18
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    83   1e-15
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    83   1e-15
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    83   2e-15
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind...    82   2e-15
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi...    82   3e-15
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S...    82   3e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    81   5e-15
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    81   5e-15
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    80   9e-15
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S...    80   9e-15
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    80   1e-14
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra...    79   2e-14
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapi...    79   3e-14
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus muscu...    78   6e-14
sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS...    77   1e-13
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    77   1e-13
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ...    76   2e-13
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    75   5e-13
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-...    75   5e-13
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus...    73   2e-12
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ...    73   2e-12
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric...    73   2e-12
sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein OS=Xeno...    72   4e-12
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    72   4e-12
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo...    72   4e-12

>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2,
           mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
          Length = 158

 Score =  103 bits (256), Expect = 1e-21
 Identities = 48/81 (59%), Positives = 64/81 (79%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           STKLF+GGL+WG D+ +LRDAF  +G+VVDAKV++DR++GRS+GFGF++F     A AA 
Sbjct: 34  STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93

Query: 331 DSMDGKLLNGRTLRVNFAIEK 393
             MDGK LNGR +RVN A ++
Sbjct: 94  SEMDGKELNGRHIRVNPANDR 114


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 91.3 bits (225), Expect = 5e-18
 Identities = 47/93 (50%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = +1

Query: 124 GARFMCSVPST-KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISF 300
           GAR   SV S+ +++VG L+WG+D+ AL++ F E G VVDAKVV DRDSGRS+GFGF+++
Sbjct: 196 GARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTY 255

Query: 301 TCTDHAQAAKDSMDGKLLNGRTLRVNFAIEKQR 399
           + +     A DS++G  L+GR++RV+ A E+ R
Sbjct: 256 SSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPR 288



 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           KLFVG L + +D  AL   F   G V   +V+ D+ +GRS+GFGF++ +  +  +AA+  
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147

Query: 337 MDGKLLNGRTLRVNFAIEKQRVXXXXXXXXXXXXXXXXXXXXXQPLSNSSFGDSTSQGND 516
            +G  ++GR +RVN      +                          NSSFG     GN 
Sbjct: 148 FNGYEIDGRAIRVNAGPAPAK------------------------RENSSFGGGRG-GNS 182

Query: 517 NYFSNNTFNQETLNSVGGNNES-------GDASXMKDDFFGEDAFDEVGD--DA---FGK 660
           +Y      N     + GG +         G+ S   DD   ++ F E G+  DA   + +
Sbjct: 183 SYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDR 242

Query: 661 DGDLAQGY 684
           D   ++G+
Sbjct: 243 DSGRSRGF 250


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 47/93 (50%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = +1

Query: 124 GARFMCSVPST-KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISF 300
           GAR   SV S+ +++VG L+WG+D+ AL++ F E G VVDAKVV DRDSGRS+GFGF+++
Sbjct: 197 GARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTY 256

Query: 301 TCTDHAQAAKDSMDGKLLNGRTLRVNFAIEKQR 399
           +       A DS++G  L+GR++RV+ A E+ R
Sbjct: 257 SSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPR 289



 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           KLFVG L + +D  AL   F   G V   +V+ D+ SGRS+GFGF++ +  +  +AA+  
Sbjct: 89  KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148

Query: 337 MDGKLLNGRTLRVNFAIEKQRVXXXXXXXXXXXXXXXXXXXXXQPLSNSSFGDSTSQGND 516
            +G  ++GR +RVN      +                          NSSFG     GN 
Sbjct: 149 FNGYEIDGRAIRVNAGPAPAK------------------------RENSSFGGGRG-GNS 183

Query: 517 NYFSNNTFNQETLNSVGGNNES-------GDASXMKDDFFGEDAFDEVGD--DA---FGK 660
           +Y      N     + GG +         G+ S   DD   ++ F E G+  DA   + +
Sbjct: 184 SYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDR 243

Query: 661 DGDLAQGY 684
           D   ++G+
Sbjct: 244 DSGRSRGF 251


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           S +++VG LAWG+D++AL   F E G+VVDAKVV DRDSGRS+GFGF++++  +    A 
Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246

Query: 331 DSMDGKLLNGRTLRVN 378
           +S+DG  LNGR +RV+
Sbjct: 247 ESLDGVDLNGRAIRVS 262



 Score = 64.3 bits (155), Expect = 6e-10
 Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 25/118 (21%)
 Frame = +1

Query: 100 LKSLSPCFGARFMCSV-------------------------PSTKLFVGGLAWGMDENAL 204
           L S S CF +RF+  V                         P  K+FVG L +  D  AL
Sbjct: 44  LSSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAAL 103

Query: 205 RDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDSMDGKLLNGRTLRVN 378
            + F   G V   +V+ D+ +GRS+GFGF++ +  +  +AA    +G  L+GR LRVN
Sbjct: 104 AELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           S +++VG LAWG+D++AL   F E G+VVDAKVV DRDSGRS+GFGF++++  +    A 
Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 252

Query: 331 DSMDGKLLNGRTLRVN 378
           +S+DG  LNGR +RV+
Sbjct: 253 ESLDGVDLNGRAIRVS 268



 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 25/118 (21%)
 Frame = +1

Query: 100 LKSLSPCFGARFMCSV-------------------------PSTKLFVGGLAWGMDENAL 204
           L S S CF +RF+  V                         P  K+FVG L +  D  AL
Sbjct: 44  LSSPSSCFSSRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAAL 103

Query: 205 RDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDSMDGKLLNGRTLRVN 378
            + F   G V   +V+ D+ +GRS+GFGF++ +  +  +AA    +G  L+GR LRVN
Sbjct: 104 AELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 38/76 (50%), Positives = 58/76 (76%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           +L+VG L+WG+D+ AL + F E G+VV+A+V+ DRDSGRSKGFGF++ + +   Q A +S
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 337 MDGKLLNGRTLRVNFA 384
           ++G  L+GR +RV+ A
Sbjct: 318 LNGADLDGRQIRVSEA 333



 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +1

Query: 148 PSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAA 327
           P  KLFVG L++ +D   L   F   G V   +V+ D+ +GRS+GFGF++ +     +AA
Sbjct: 97  PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156

Query: 328 KDSMDGKLLNGRTLRVN 378
               +G    GR LRVN
Sbjct: 157 AQQFNGYEFEGRPLRVN 173


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 38/76 (50%), Positives = 56/76 (73%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           +++VG L+WG+D+ AL   F E G+VV+A+V+ DRDSGRSKGFGF+++  +   Q A  S
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264

Query: 337 MDGKLLNGRTLRVNFA 384
           +DG  L+GR +RV+ A
Sbjct: 265 LDGADLDGRQIRVSEA 280



 Score = 60.5 bits (145), Expect = 9e-09
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           KLFVG L + +D   L   F   G V   +V+ D+ +GRS+GFGF++ +     +AA   
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 337 MDGKLLNGRTLRVN 378
            +G  L+GR LRVN
Sbjct: 152 FNGYELDGRPLRVN 165


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 37/84 (44%), Positives = 58/84 (69%)
 Frame = +1

Query: 148 PSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAA 327
           P+ +++VG + W +D+  L   F E+G+VV A+VV DR+SGRS+GFGF++ +       A
Sbjct: 189 PTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEA 248

Query: 328 KDSMDGKLLNGRTLRVNFAIEKQR 399
             ++DG+ L+GRT+RVN A E+ R
Sbjct: 249 IANLDGQTLDGRTIRVNAAEERPR 272



 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           KLFVG L + +D   L   F + G V  A+V+ +R++ RS+GFGF++ +  + A  A + 
Sbjct: 98  KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157

Query: 337 MDGKLLNGRTLRVNFA 384
                LNGR L VN A
Sbjct: 158 YSQYDLNGRLLTVNKA 173


>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic
           acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1
          Length = 157

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 36/76 (47%), Positives = 55/76 (72%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           + FVGGLAW     +L +AF  YGE++D+KV+ DR++GRS+GFGF++F+  +    A ++
Sbjct: 9   RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68

Query: 337 MDGKLLNGRTLRVNFA 384
           M+GK L+GR + VN A
Sbjct: 69  MNGKELDGRNITVNQA 84


>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7
           OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1
          Length = 176

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 36/76 (47%), Positives = 56/76 (73%)
 Frame = +1

Query: 157 KLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAKDS 336
           + FVGGLAW  D+ AL  AF +YG+V+D+K++ DR++GRS+GFGF++F      + A + 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 337 MDGKLLNGRTLRVNFA 384
           M+G+ L+GR++ VN A
Sbjct: 69  MNGQDLDGRSITVNEA 84
tr_hit_id Q40436
Definition tr|Q40436|Q40436_NICSY RNA-binding glycine rich protein OS=Nicotiana sylvestris
Align length 164
Score (bit) 116.0
E-value 2.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949375|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N05, 5'
         (717 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q40436|Q40436_NICSY RNA-binding glycine rich protein OS=Nicot...   116   2e-24
tr|Q941H9|Q941H9_TOBAC RNA-binding protein OS=Nicotiana tabacum ...   108   3e-22
tr|Q941H8|Q941H8_SOLTU RNA-binding protein OS=Solanum tuberosum ...   107   1e-21
tr|Q3HVL3|Q3HVL3_SOLTU RNA binding protein-like protein OS=Solan...   106   1e-21
tr|B6TR84|B6TR84_MAIZE Glycine-rich RNA-binding protein 7 OS=Zea...   106   1e-21
tr|B5KLZ7|B5KLZ7_BAMOL Putative glycine-rich RNA-binding protein...   106   2e-21
tr|Q9LIS2|Q9LIS2_ARATH Glycine-rich RNA binding protein-like (AT...   105   3e-21
tr|Q8LDS0|Q8LDS0_ARATH Glycine-rich RNA binding protein, putativ...   105   3e-21
tr|Q7F2X8|Q7F2X8_ORYSJ cDNA clone:001-028-A07, full insert seque...   105   4e-21
tr|O24188|O24188_ORYSA OsGRP2 OS=Oryza sativa GN=OsGRP2 PE=1 SV=1     105   4e-21
tr|A9STV8|A9STV8_PHYPA Predicted protein (Fragment) OS=Physcomit...   105   4e-21
tr|A9NZ72|A9NZ72_PICSI Putative uncharacterized protein OS=Picea...   105   4e-21
tr|A2WYB5|A2WYB5_ORYSI Putative uncharacterized protein OS=Oryza...   105   4e-21
tr|Q40437|Q40437_NICSY RGP-3 (Fragment) OS=Nicotiana sylvestris ...   104   5e-21
tr|O23793|O23793_NICSY RNA binding protein OS=Nicotiana sylvestr...   104   5e-21
tr|B6T255|B6T255_MAIZE Putative uncharacterized protein OS=Zea m...   104   7e-21
tr|B4F8A7|B4F8A7_MAIZE Putative uncharacterized protein OS=Zea m...   104   7e-21
tr|A9SZQ9|A9SZQ9_PHYPA Predicted protein OS=Physcomitrella paten...   104   7e-21
tr|Q3EA40|Q3EA40_ARATH Uncharacterized protein At4g13850.2 OS=Ar...   103   1e-20
tr|P93486|P93486_PEA Glycine-rich RNA-binding protein OS=Pisum s...   103   1e-20
tr|A8MSB9|A8MSB9_ARATH Uncharacterized protein At4g13850.3 OS=Ar...   103   1e-20
tr|A8MRQ4|A8MRQ4_ARATH Uncharacterized protein At4g13850.4 OS=Ar...   103   1e-20
tr|Q9FNR1|Q9FNR1_ARATH Similarity to RNA binding protein (AT5g61...   102   2e-20
tr|A5B074|A5B074_VITVI Putative uncharacterized protein OS=Vitis...   102   3e-20
tr|Q9SFB4|Q9SFB4_ARATH Putative RNA-binding protein (At3g08000) ...   101   4e-20
tr|Q109W0|Q109W0_ORYSJ Os10g0321700 protein OS=Oryza sativa subs...   101   4e-20
tr|B6UB95|B6UB95_MAIZE Glycine-rich RNA-binding protein 7 OS=Zea...   101   4e-20
tr|B6TI13|B6TI13_MAIZE Glycine-rich RNA-binding protein 7 OS=Zea...   101   4e-20
tr|A5C101|A5C101_VITVI Putative uncharacterized protein OS=Vitis...   101   4e-20
tr|Q2QQ97|Q2QQ97_ORYSJ Os12g0502200 protein OS=Oryza sativa subs...   101   6e-20

>tr|Q40436|Q40436_NICSY RNA-binding glycine rich protein
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 259

 Score =  116 bits (290), Expect = 2e-24
 Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
 Frame = +1

Query: 142 SVPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQ 321
           S+ S+KLFVGGL+WG DE +L++AF ++GEV++A+V++DRD+GRS+GFGF+SFT T+ A 
Sbjct: 36  SMSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAA 95

Query: 322 AAKDSMDGKLLNGRTLRVNFAIEKQRVXXXXXXXXXXXXXXXXXXXXXQPLSNSSFGDST 501
           +A  ++DG+ L+GR +RVN+A EK R                             +  S 
Sbjct: 96  SALTALDGQDLHGRQIRVNYATEKLR----GSFGGGYGSGGGYGGGDGSFAGAGGYASSN 151

Query: 502 SQGNDNYFSNNTFNQETLNSVG----GNNESG-DASXMKDDFFG 618
             G  NY SNN++     N  G    GN E G DA  ++   FG
Sbjct: 152 YGGGGNYGSNNSYPTGGGNYGGGVRYGNGEGGNDAGGVRQGSFG 195


>tr|Q941H9|Q941H9_TOBAC RNA-binding protein OS=Nicotiana tabacum
           PE=2 SV=1
          Length = 277

 Score =  108 bits (271), Expect = 3e-22
 Identities = 48/86 (55%), Positives = 74/86 (86%)
 Frame = +1

Query: 142 SVPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQ 321
           S+ S+KLFVGGL++G DE++L++AF +YG+V++A+V++DRD+GRS+GFGFISF  ++ A 
Sbjct: 36  SMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAA 95

Query: 322 AAKDSMDGKLLNGRTLRVNFAIEKQR 399
           +A  +MDG+ L+GR +RVN+A EK+R
Sbjct: 96  SALQAMDGQDLHGRRIRVNYATEKRR 121


>tr|Q941H8|Q941H8_SOLTU RNA-binding protein OS=Solanum tuberosum
           PE=2 SV=1
          Length = 339

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/86 (54%), Positives = 73/86 (84%)
 Frame = +1

Query: 142 SVPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQ 321
           S+ S+KLFVGGL++G DE++L++ F +YGEV++A+V+LDR++GRS+GFGFISF  ++ A 
Sbjct: 36  SMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEAT 95

Query: 322 AAKDSMDGKLLNGRTLRVNFAIEKQR 399
           +A  +MDG+ L+GR ++VN+A EK+R
Sbjct: 96  SAMQAMDGQDLHGRRIKVNYATEKRR 121


>tr|Q3HVL3|Q3HVL3_SOLTU RNA binding protein-like protein OS=Solanum
           tuberosum PE=2 SV=1
          Length = 150

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/109 (46%), Positives = 77/109 (70%)
 Frame = +1

Query: 67  LVQQQTHSGFLLKSLSPCFGARFMCSVPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAK 246
           L++Q   +G    + SP           S++LFVGGL+WG D+ +L++AF  +G+VVDAK
Sbjct: 10  LLRQSISTGNAASANSPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAK 69

Query: 247 VVLDRDSGRSKGFGFISFTCTDHAQAAKDSMDGKLLNGRTLRVNFAIEK 393
           V++DRDSGRS+GFGF++F+  D A+ A ++MDG+ L+GR +RVN A E+
Sbjct: 70  VIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118


>tr|B6TR84|B6TR84_MAIZE Glycine-rich RNA-binding protein 7 OS=Zea
           mays PE=2 SV=1
          Length = 253

 Score =  106 bits (265), Expect = 1e-21
 Identities = 47/81 (58%), Positives = 69/81 (85%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           S+KLFVGGL++G D+++LRD F +YG+V++AK++LDR+SGRS+GFGFI++T ++ A AA 
Sbjct: 33  SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAI 92

Query: 331 DSMDGKLLNGRTLRVNFAIEK 393
            +MDGK L+GR +RVN A E+
Sbjct: 93  TAMDGKTLDGRNIRVNHANER 113


>tr|B5KLZ7|B5KLZ7_BAMOL Putative glycine-rich RNA-binding protein 2
           OS=Bambusa oldhamii PE=2 SV=1
          Length = 162

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/81 (59%), Positives = 65/81 (80%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           STKLFVGGL+WG D+ +L+DAF  +GEVV+A+V+ DRD+G+S+GFGF+SF+  D A+ A 
Sbjct: 36  STKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAM 95

Query: 331 DSMDGKLLNGRTLRVNFAIEK 393
            SMDG+ L GR + VNFA E+
Sbjct: 96  SSMDGQELEGRNIHVNFANER 116


>tr|Q9LIS2|Q9LIS2_ARATH Glycine-rich RNA binding protein-like
           (AT3g23830/F14O13_2) OS=Arabidopsis thaliana
           GN=At3g23830 PE=2 SV=1
          Length = 136

 Score =  105 bits (262), Expect = 3e-21
 Identities = 47/81 (58%), Positives = 63/81 (77%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           S+KLFVGGL+WG D+++L+ AF  +GEV +A V+ DR++GRS+GFGF+SF+C D A  A 
Sbjct: 34  SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93

Query: 331 DSMDGKLLNGRTLRVNFAIEK 393
             MDGK LNGR +RVN A E+
Sbjct: 94  KEMDGKELNGRQIRVNLATER 114


>tr|Q8LDS0|Q8LDS0_ARATH Glycine-rich RNA binding protein, putative
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 136

 Score =  105 bits (262), Expect = 3e-21
 Identities = 47/81 (58%), Positives = 63/81 (77%)
 Frame = +1

Query: 151 STKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDRDSGRSKGFGFISFTCTDHAQAAK 330
           S+KLFVGGL+WG D+++L+ AF  +GEV +A V+ DR++GRS+GFGF+SF+C D A  A 
Sbjct: 34  SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93

Query: 331 DSMDGKLLNGRTLRVNFAIEK 393
             MDGK LNGR +RVN A E+
Sbjct: 94  KEMDGKELNGRQIRVNLATER 114


>tr|Q7F2X8|Q7F2X8_ORYSJ cDNA clone:001-028-A07, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0004D12.37 PE=2 SV=1
          Length = 150

 Score =  105 bits (261), Expect = 4e-21
 Identities = 51/104 (49%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
 Frame = +1

Query: 85  HSGFLLKSLSPCFGARFMCS-VPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDR 261
           HSG    + +    A F  + + STKLFVGGL+W  ++++L++AF  +G+V +A+V+ DR
Sbjct: 13  HSGLTSSASAGSSPAMFNAARLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDR 72

Query: 262 DSGRSKGFGFISFTCTDHAQAAKDSMDGKLLNGRTLRVNFAIEK 393
           +SGRS+GFGF+SF   D A++A D+MDGK L GR++RVNFA E+
Sbjct: 73  ESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANER 116


>tr|O24188|O24188_ORYSA OsGRP2 OS=Oryza sativa GN=OsGRP2 PE=1 SV=1
          Length = 150

 Score =  105 bits (261), Expect = 4e-21
 Identities = 51/104 (49%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
 Frame = +1

Query: 85  HSGFLLKSLSPCFGARFMCS-VPSTKLFVGGLAWGMDENALRDAFVEYGEVVDAKVVLDR 261
           HSG    + +    A F  + + STKLFVGGL+W  ++++L++AF  +G+V +A+V+ DR
Sbjct: 13  HSGLTSSASAGSSPAMFNAARLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDR 72

Query: 262 DSGRSKGFGFISFTCTDHAQAAKDSMDGKLLNGRTLRVNFAIEK 393
           +SGRS+GFGF+SF   D A++A D+MDGK L GR++RVNFA E+
Sbjct: 73  ESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANER 116