DK949376 |
Clone id |
TST38A01NGRL0005_N06 |
Library |
TST38 |
Length |
653 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N06. 5' end sequence. |
Accession |
DK949376 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL69Contig1 |
Sequence |
GATTGGTATGTAGAGTCTTTGCTGGAAAAATGTGATATCTTGTTGCTTGGTGGAGGTATG ATTTTCACTTTCTACAAGGCACAAGGTCTTGCTGTCGGATCTTCTTTGGTCGAGGCGGAT AAGCTCGAGCTTGCAACCAGTCTTATGGAGAAAGCGAAAGCAAAGGGCGTCTCTTTAATG TTGCCGACTGATGTTGTTATTGCAGACAAATTCGCTCCTGATGCCAATAGCAAGACTGTA CCTGCATCGGCCATCCCAGAAGGATGGATGGGTCTTGACATTGGTCCTGATTCCATTAAG ACATTCAGTGAGGCCTTGGAAACAACCAAAACTGTCATCTGGAATGGGCCCATGGGTGTA TTTGAGTTTGATAAGTTTGCTGCTGGCACTGAGGCAATTGCAAAGAAGCTGGCAGACATA AGTGGAAAAGGTGTTACCACAATCATTGGTGGTGGAGACTCGGTTGCCGCTGTCGAAAAG GTTGGAGTAGCCGAAAAAATGAGCCACATTTCAACAGGCGGTGGTGCAAGCTTGGAATTG CTGGAAGGCAAGGTTTTGCCTGGTGTTGCAGCCCTAGACGAAGCTGTCGTATCTGTTGCA GCTTGAGGGGAACTTGTTTTCGTATGATGTCCTTTAGCCGCGACACATCTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42961 |
Definition |
sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum |
Align length |
197 |
Score (bit) |
328.0 |
E-value |
2.0e-89 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949376|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_N06, 5' (653 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 328 2e-89 sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 316 8e-86 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 311 1e-84 sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 311 1e-84 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 305 1e-82 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 302 1e-81 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 283 6e-76 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 281 3e-75 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 280 6e-75 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 277 3e-74 sp|A2CDG7|PGK_PROM3 Phosphoglycerate kinase OS=Prochlorococcus m... 277 3e-74 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 277 4e-74 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 276 7e-74 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 275 1e-73 sp|Q7V461|PGK_PROMM Phosphoglycerate kinase OS=Prochlorococcus m... 275 1e-73 sp|Q3AGU1|PGK_SYNSC Phosphoglycerate kinase OS=Synechococcus sp.... 274 3e-73 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 273 7e-73 sp|B0JT86|PGK_MICAN Phosphoglycerate kinase OS=Microcystis aerug... 271 3e-72 sp|Q7U3V0|PGK_SYNPX Phosphoglycerate kinase OS=Synechococcus sp.... 270 5e-72 sp|A5GPB2|PGK_SYNPW Phosphoglycerate kinase OS=Synechococcus sp.... 267 4e-71 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 265 2e-70 sp|Q2JXF0|PGK_SYNJA Phosphoglycerate kinase OS=Synechococcus sp.... 263 6e-70 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 263 8e-70 sp|Q8DGP7|PGK_THEEB Phosphoglycerate kinase OS=Thermosynechococc... 260 4e-69 sp|Q2JKX6|PGK_SYNJB Phosphoglycerate kinase OS=Synechococcus sp.... 260 5e-69 sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus m... 260 5e-69 sp|A2C025|PGK_PROM1 Phosphoglycerate kinase OS=Prochlorococcus m... 259 9e-69 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 258 2e-68 sp|Q46HH8|PGK_PROMT Phosphoglycerate kinase OS=Prochlorococcus m... 258 2e-68 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 255 1e-67
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 328 bits (841), Expect = 2e-89 Identities = 167/197 (84%), Positives = 178/197 (90%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLLEKCDILLLGGGMIFTFYKAQGL+VGSSLVE DKLELATSL+EKAKAKGVSL+LP+ Sbjct: 284 IESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKGVSLLLPS 343
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVVIADKFAPDANSK VPASAIP+GWMGLDIGPDS+KTF++AL+TTKTVIWNGPMGVFEF Sbjct: 344 DVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTKTVIWNGPMGVFEF 403
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFA GTEAIAKKLAD+SGKGVTTIIGGGDS MSHISTGGGASLELLEG Sbjct: 404 DKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEG 463
Query: 550 KVLPGVAALDEAVVSVA 600 KVLPGV ALDEA VA Sbjct: 464 KVLPGVIALDEADAPVA 480
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 316 bits (809), Expect = 8e-86 Identities = 157/195 (80%), Positives = 176/195 (90%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLLEKCDILLLGGGMIFTFYKAQGL+VGSSLVE DKLELATSL+ KAKAKGVSL+LP+ Sbjct: 281 IESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPS 340
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DV+IADKFAPDANS+TVPASAIP+GWMGLDIGPDS+KTF++AL+TT+T+IWNGPMGVFEF Sbjct: 341 DVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEF 400
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFA GTE+IAKKLA++S KGVTTIIGGGDS MSHISTGGGASLELLEG Sbjct: 401 DKFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEG 460
Query: 550 KVLPGVAALDEAVVS 594 K LPGV ALDE V++ Sbjct: 461 KELPGVVALDEGVMT 475
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 311 bits (798), Expect = 1e-84 Identities = 159/192 (82%), Positives = 170/192 (88%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLLEK D+LLLGGGMIFTFYKAQG AVGSSLVE DKL+LATSLMEKAKAKGVSL+LPT Sbjct: 210 IESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLPT 269
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVVIADKFA DANSK VPAS IP+GWMGLDIGPD+IK+F AL+TTKTVIWNGPMGVFEF Sbjct: 270 DVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGSALDTTKTVIWNGPMGVFEF 329
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFAAGTEAIAKKLA++SGKGVTTIIGGGDS MSHISTGGGASLELLEG Sbjct: 330 DKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHISTGGGASLELLEG 389
Query: 550 KVLPGVAALDEA 585 K LPGV ALD+A Sbjct: 390 KPLPGVLALDDA 401
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 311 bits (798), Expect = 1e-84 Identities = 158/193 (81%), Positives = 171/193 (88%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLLEKCDILLLGGGMIFTFYKAQGL+VGSSLVE DKLELAT L+ KAKAKGVSL+LPT Sbjct: 282 IESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKGVSLLLPT 341
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+ADKFAPDANSK VPAS I +GWMGLDIGPDSIKTF+EAL+TT+TVIWNGPMGVFE Sbjct: 342 DVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIKTFNEALDTTQTVIWNGPMGVFEM 401
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 +KFAAGTEAIA KLA++S KGVTTIIGGGDS MSHISTGGGASLELLEG Sbjct: 402 EKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEG 461
Query: 550 KVLPGVAALDEAV 588 KVLPGV ALDEA+ Sbjct: 462 KVLPGVIALDEAI 474
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 305 bits (781), Expect = 1e-82 Identities = 156/192 (81%), Positives = 169/192 (88%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLLEKCDILLLGGGMIFTFYKAQG++VGSSLVE DKL+LATSL+ KAK KGVSL+LPT Sbjct: 237 IESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPT 296
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVVIADKFA DA+SK VPAS IP+GWMGLDIGPDSIKTFSEAL+TT+TVIWNGPMGVFEF Sbjct: 297 DVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEF 356
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 +KFAAGTEAIAKKL +IS KG TTIIGGGDS MSHISTGGGASLELLEG Sbjct: 357 EKFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHISTGGGASLELLEG 416
Query: 550 KVLPGVAALDEA 585 K LPGV AL+EA Sbjct: 417 KQLPGVLALNEA 428
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 302 bits (773), Expect = 1e-81 Identities = 152/192 (79%), Positives = 169/192 (88%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +ESLL K DIL+LGGGMIFTFYKAQGLAVG SLVE DKLELATSL+E AK+KGV L+LPT Sbjct: 210 IESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPT 269
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+ADKFA DA SK VPA+AIP+GWMGLD+GPDSIKTF+EAL+TTKTVIWNGPMGVFEF Sbjct: 270 DVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEF 329
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 +KFAAGT+AIAK+LA+++GKGVTTIIGGGDS MSHISTGGGASLELLEG Sbjct: 330 EKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEG 389
Query: 550 KVLPGVAALDEA 585 K LPGV ALDEA Sbjct: 390 KPLPGVLALDEA 401
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 283 bits (724), Expect = 6e-76 Identities = 144/192 (75%), Positives = 157/192 (81%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +E+LLEKCD L++GGGMIFTFYKA+GL VG SLVE DKLELA SL KAK +GVSL+LPT Sbjct: 209 IETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPT 268
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+AD FAPDANS+TV IP+GWMGLDIGPDS+K F EAL TKTVIWNGPMGVFEF Sbjct: 269 DVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEF 328
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFAAGTEAIA LA+I G TTIIGGGDS MSHISTGGGASLELLEG Sbjct: 329 DKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEG 388
Query: 550 KVLPGVAALDEA 585 KVLPG+AALDEA Sbjct: 389 KVLPGIAALDEA 400
>sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1 Length = 400
Score = 281 bits (718), Expect = 3e-75 Identities = 143/192 (74%), Positives = 156/192 (81%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +E+LLEKCD L++GGGMIFTFYKA+GL VG SLVE DKLELA SL KAK +GVSL+LPT Sbjct: 209 IETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPT 268
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+AD FAPDANS+TV IP+GWMGLDIGPDS+K F AL TKTVIWNGPMGVFEF Sbjct: 269 DVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEF 328
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFAAGTEAIA LA+I G TTIIGGGDS MSHISTGGGASLELLEG Sbjct: 329 DKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEG 388
Query: 550 KVLPGVAALDEA 585 KVLPG+AALDEA Sbjct: 389 KVLPGIAALDEA 400
>sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1 Length = 402
Score = 280 bits (715), Expect = 6e-75 Identities = 139/192 (72%), Positives = 159/192 (82%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +E+LL+KCD LL+GGGMIFTFYKAQGL+VG SLVE DKL+LA SLM KA+ KGV L+LP Sbjct: 210 IETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPV 269
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+ADKFAPDAN+KTV AIP+GWMGLDIGP+S+K F EAL ++VIWNGPMGVFEF Sbjct: 270 DVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEF 329
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 D+FA GTEAIA+ LA ++ KG TTIIGGGDS MSHISTGGGASLELLEG Sbjct: 330 DQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEG 389
Query: 550 KVLPGVAALDEA 585 KVLPGVAALD+A Sbjct: 390 KVLPGVAALDDA 401
>sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1 Length = 402
Score = 277 bits (709), Expect = 3e-74 Identities = 141/192 (73%), Positives = 155/192 (80%) Frame = +1
Query: 10 VESLLEKCDILLLGGGMIFTFYKAQGLAVGSSLVEADKLELATSLMEKAKAKGVSLMLPT 189 +E+L++KCD +L+GGGMIFTFYKA+GL+VG SLVE DKLELA L KAKAKGV L+LPT Sbjct: 210 LEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPT 269
Query: 190 DVVIADKFAPDANSKTVPASAIPEGWMGLDIGPDSIKTFSEALETTKTVIWNGPMGVFEF 369 DVV+AD FAPDANS+ AIPEGWMGLDIGPDSIK F +AL KTVIWNGPMGVFEF Sbjct: 270 DVVLADNFAPDANSQVASIDAIPEGWMGLDIGPDSIKVFQDALGDCKTVIWNGPMGVFEF 329
Query: 370 DKFAAGTEAIAKKLADISGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEG 549 DKFAAGT AIA LA++S KG TIIGGGDS MSHISTGGGASLELLEG Sbjct: 330 DKFAAGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAAQMSHISTGGGASLELLEG 389
Query: 550 KVLPGVAALDEA 585 KVLPGVAALDEA Sbjct: 390 KVLPGVAALDEA 401
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2XPV6 |
Definition |
tr|Q2XPV6|Q2XPV6_SOLTU Phosphoglycerate kinase OS=Solanum tuberosum |
Align length |
197 |
Score (bit) |
330.0 |
E-value |
5.0e-89 |
Report |
|