DK949377 |
Clone id |
TST38A01NGRL0005_N07 |
Library |
TST38 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N07. 5' end sequence. |
Accession |
DK949377 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL370Contig1 |
Sequence |
CTTCGTAGCTGACCATCACTTAGCTTCGCTCTTCGCTGTGCTTTGCAAGTTTGCACAGCC AAACGTGAGCAATACAAGTAAGCTGTTTACGCGAATCACACTCACCTGAACAACAAGTGG TTAGTGCTGTGGAGTTCTCCTTCACCGTTTAGCTATGGCGAGTACCATGCAGAAGCTTCC TGCATCCGCCTCCTCTTCTTACCACCACCGCGATGCCATCCTACCCTCTCGCAGCAGCCC GTCATTGTCTTTGAGGATGCAGTTCGTTAAGGGTGAGGTGTTTGGGTACTCCCTCTCCCT CCCGAAGGCGCTTGTCCCTGTCAGTCCCTTGAAATCTTTGAATGGCCCCATCCCTACCTG CAACGTTGCCACAACAACAGCTCCAGCCAAAGAGGCAGGCAAAGTTAAAGTGAGACCTGA TATCAGGAACATTGCTATCATTGCTCATGTGGACCATGGGAAAACGACTTTGGTGGATGC CATGCTGAAGCAGGCAAAGGTGTTTCGAGAAAATCAGGCCGTACAAGAGAGAGTAATGGA TTCAAACGCCTTAGAGAGAGAGCGAGGGATCACAATCTTGAGCAAAAATACTGCTATTCG CTATAAAGGGACAAAGATTAATATCATAGACACTCCTGGACATTCTGACTTTGGTGGAGA AGTCGAACGCGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O07631 |
Definition |
sp|O07631|TYPA_BACSU GTP-binding protein typA/bipA homolog OS=Bacillus subtilis |
Align length |
90 |
Score (bit) |
141.0 |
E-value |
4.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8JCK3 |
Definition |
tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas reinhardtii |
Align length |
109 |
Score (bit) |
171.0 |
E-value |
3.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949377|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_N07, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas... 171 3e-41 tr|Q6SYB1|Q6SYB1_TRIPR GTP-binding protein TypA OS=Trifolium pra... 168 3e-40 tr|A9REI5|A9REI5_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|A9SWN7|A9SWN7_PHYPA Predicted protein OS=Physcomitrella paten... 164 5e-39 tr|A9YT54|A9YT54_SUASA Tyrosine phosphorylated protein A OS=Suae... 164 6e-39 tr|A9PF30|A9PF30_POPTR Putative uncharacterized protein OS=Popul... 162 1e-38 tr|Q6KA61|Q6KA61_ORYSJ Os02g0285800 protein OS=Oryza sativa subs... 159 2e-37 tr|B8AFM9|B8AFM9_ORYSI Putative uncharacterized protein OS=Oryza... 159 2e-37 tr|A3A5M0|A3A5M0_ORYSJ Putative uncharacterized protein OS=Oryza... 159 2e-37 tr|A7PWD3|A7PWD3_VITVI Chromosome chr8 scaffold_34, whole genome... 156 1e-36 tr|A9WGX0|A9WGX0_CHLAA GTP-binding protein TypA OS=Chloroflexus ... 153 1e-35 tr|B2QT52|B2QT52_9CHLR GTP-binding protein TypA OS=Chloroflexus ... 153 1e-35 tr|B7BM25|B7BM25_9CLOT Putative uncharacterized protein OS=Clost... 152 2e-35 tr|Q9FNA8|Q9FNA8_ARATH GTP-binding protein typA (Tyrosine phosph... 152 2e-35 tr|A5ZNA1|A5ZNA1_9FIRM Putative uncharacterized protein OS=Rumin... 152 2e-35 tr|A5KKP3|A5KKP3_9FIRM Putative uncharacterized protein OS=Rumin... 152 2e-35 tr|B7Y0F0|B7Y0F0_RUMHA Putative uncharacterized protein OS=Blaut... 151 3e-35 tr|B7C3F1|B7C3F1_9FIRM Putative uncharacterized protein OS=Roseb... 151 3e-35 tr|B0G385|B0G385_9FIRM Putative uncharacterized protein OS=Dorea... 150 5e-35 tr|A7B7M6|A7B7M6_RUMGN Putative uncharacterized protein OS=Rumin... 150 5e-35 tr|A5N7U1|A5N7U1_CLOK5 GTP-binding protein OS=Clostridium kluyve... 150 7e-35 tr|B8G578|B8G578_9CHLR GTP-binding protein TypA OS=Chloroflexus ... 150 7e-35 tr|A5Z9G2|A5Z9G2_9FIRM Putative uncharacterized protein OS=Eubac... 150 7e-35 tr|A0Q144|A0Q144_CLONN GTP-binding protein TypA OS=Clostridium n... 150 9e-35 tr|B1BAZ0|B1BAZ0_CLOBO GTP-binding protein TypA/BipA OS=Clostrid... 150 9e-35 tr|B0NJJ6|B0NJJ6_EUBSP Putative uncharacterized protein OS=Clost... 150 9e-35 tr|A9B0I8|A9B0I8_HERA2 GTP-binding protein TypA OS=Herpetosiphon... 149 1e-34 tr|A3DE60|A3DE60_CLOTH GTP-binding protein TypA OS=Clostridium t... 149 1e-34 tr|Q896E7|Q896E7_CLOTE GTP-binding protein lepA OS=Clostridium t... 149 2e-34 tr|B4U8A4|B4U8A4_HYDS0 GTP-binding protein TypA OS=Hydrogenobacu... 149 2e-34
>tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas reinhardtii GN=GBA1 PE=4 SV=1 Length = 683
Score = 171 bits (434), Expect = 3e-41 Identities = 83/109 (76%), Positives = 93/109 (85%) Frame = +2
Query: 347 PIPTCNVATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQ 526 P+ C AT APA + + VR DIRNIAIIAHVDHGKTTLVDAMLKQ+KVFR+NQA Sbjct: 61 PVTVCRTATVDAPASASSEGSVREDIRNIAIIAHVDHGKTTLVDAMLKQSKVFRDNQATA 120
Query: 527 ERVMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 ER+MDSN LERERGITIL+KNTAIRY+G K+NIIDTPGH+DFGGEVERV Sbjct: 121 ERIMDSNDLERERGITILAKNTAIRYRGIKVNIIDTPGHADFGGEVERV 169
>tr|Q6SYB1|Q6SYB1_TRIPR GTP-binding protein TypA OS=Trifolium pratense PE=2 SV=1 Length = 676
Score = 168 bits (426), Expect = 3e-40 Identities = 88/136 (64%), Positives = 105/136 (77%), Gaps = 1/136 (0%) Frame = +2
Query: 269 KGEVFGYSLSLPKALVPVSPLKSLNGPIPTCNVATTTAP-AKEAGKVKVRPDIRNIAIIA 445 + ++FG SLS K + ++ + PI C+V+ T P +E K+ R DIRNIAI+A Sbjct: 33 RNKLFGLSLSSSKPTLRIASRNNNINPIK-CSVSEVTEPITEEKRKLMRRADIRNIAIVA 91
Query: 446 HVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILSKNTAIRYKGTKINI 625 HVDHGKTTLVDAMLKQ KVFR+NQ VQER+MDSN LERERGITILSKNT++ YK KINI Sbjct: 92 HVDHGKTTLVDAMLKQTKVFRDNQTVQERIMDSNDLERERGITILSKNTSVTYKDAKINI 151
Query: 626 IDTPGHSDFGGEVERV 673 IDTPGHSDFGGEVER+ Sbjct: 152 IDTPGHSDFGGEVERI 167
>tr|A9REI5|A9REI5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65080 PE=4 SV=1 Length = 626
Score = 166 bits (421), Expect = 1e-39 Identities = 81/91 (89%), Positives = 87/91 (95%) Frame = +2
Query: 401 KVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITIL 580 K VR D+RNIAI+AHVDHGKTTLVDAML+QAKVFR+NQ+VQER+MDSN LERERGITIL Sbjct: 26 KTSVRTDVRNIAIVAHVDHGKTTLVDAMLRQAKVFRDNQSVQERIMDSNDLERERGITIL 85
Query: 581 SKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 SKNTAIRYKGTKINIIDTPGHSDFGGEVERV Sbjct: 86 SKNTAIRYKGTKINIIDTPGHSDFGGEVERV 116
>tr|A9SWN7|A9SWN7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_232741 PE=4 SV=1 Length = 599
Score = 164 bits (415), Expect = 5e-39 Identities = 80/90 (88%), Positives = 87/90 (96%) Frame = +2
Query: 404 VKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILS 583 + +R DIRNIAI+AHVDHGKTTLVDAML+QAKVFR+NQ+VQER+MDSN LERERGITILS Sbjct: 1 MSLRSDIRNIAIVAHVDHGKTTLVDAMLRQAKVFRDNQSVQERIMDSNDLERERGITILS 60
Query: 584 KNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 KNTAIRYKGTKINIIDTPGHSDFGGEVERV Sbjct: 61 KNTAIRYKGTKINIIDTPGHSDFGGEVERV 90
>tr|A9YT54|A9YT54_SUASA Tyrosine phosphorylated protein A OS=Suaeda salsa GN=TypA PE=2 SV=1 Length = 683
Score = 164 bits (414), Expect = 6e-39 Identities = 82/107 (76%), Positives = 94/107 (87%), Gaps = 2/107 (1%) Frame = +2
Query: 359 CNVATTTA--PAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQER 532 C+ A T A P+++ G++ R DIRNIAI+AHVDHGKTTLVD+MLKQAKVFR+NQ VQER Sbjct: 68 CSAAGTAAATPSEKKGQLMRRNDIRNIAIVAHVDHGKTTLVDSMLKQAKVFRDNQTVQER 127
Query: 533 VMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 +MDSN LERERGITILSKNT+I YK TKINIIDTPGHSDFGGEVER+ Sbjct: 128 IMDSNDLERERGITILSKNTSIGYKDTKINIIDTPGHSDFGGEVERI 174
>tr|A9PF30|A9PF30_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 696
Score = 162 bits (411), Expect = 1e-38 Identities = 81/113 (71%), Positives = 96/113 (84%) Frame = +2
Query: 335 SLNGPIPTCNVATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFREN 514 S + PI C+V+T + ++ ++ R DIRNIAI+AHVDHGKTTLVDAMLKQ+KVFR+N Sbjct: 60 SFHSPIK-CSVSTEASTTEKRSQMMRRGDIRNIAIVAHVDHGKTTLVDAMLKQSKVFRDN 118
Query: 515 QAVQERVMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 Q VQER+MDSN +ERERGITILSKNT+I YK TKINIIDTPGHSDFGGEVER+ Sbjct: 119 QFVQERIMDSNDIERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERI 171
>tr|Q6KA61|Q6KA61_ORYSJ Os02g0285800 protein OS=Oryza sativa subsp. japonica GN=OJ1115_D03.25 PE=4 SV=1 Length = 669
Score = 159 bits (402), Expect = 2e-37 Identities = 79/103 (76%), Positives = 87/103 (84%) Frame = +2
Query: 365 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 544 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 58 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 117
Query: 545 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERV Sbjct: 118 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERV 160
>tr|B8AFM9|B8AFM9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06773 PE=4 SV=1 Length = 661
Score = 159 bits (402), Expect = 2e-37 Identities = 79/103 (76%), Positives = 87/103 (84%) Frame = +2
Query: 365 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 544 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 58 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 117
Query: 545 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERV Sbjct: 118 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERV 160
>tr|A3A5M0|A3A5M0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006092 PE=4 SV=1 Length = 703
Score = 159 bits (402), Expect = 2e-37 Identities = 79/103 (76%), Positives = 87/103 (84%) Frame = +2
Query: 365 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 544 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 100 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 159
Query: 545 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERV 673 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERV Sbjct: 160 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERV 202
>tr|A7PWD3|A7PWD3_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025567001 PE=4 SV=1 Length = 597
Score = 156 bits (394), Expect = 1e-36 Identities = 77/87 (88%), Positives = 82/87 (94%) Frame = +2
Query: 413 RPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILSKNT 592 R DIRNIAI+AHVDHGKTTLVDAMLKQAKVFR+NQ VQER+MDSN LERERGITILSKNT Sbjct: 3 RRDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQFVQERIMDSNDLERERGITILSKNT 62
Query: 593 AIRYKGTKINIIDTPGHSDFGGEVERV 673 +I YK TKINIIDTPGHSDFGGEVER+ Sbjct: 63 SIGYKDTKINIIDTPGHSDFGGEVERI 89
|