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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949385
Clone id TST38A01NGRL0005_N15
Library
Length 743
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TTTTTCTCATTGGAGACATCCGAGTACAGAGTATTCCTAGTGCGTCATTCAAAGTAATGA
CAGGAGCACTGTGAACTGGAATATCTGTAAGGCCACCAAGAACGGGTACTTCTGACGCAT
CACATCGGATGGGTGACAGGGAGTATCGGGAAGAAGTATCCGACCATCCGGGAATGGACA
TCTCTGATGCGTCATAGGATGGGTGACATAGAGCATCGTCAAGGGGATTGTACCGTAAGT
TCGGTAGGAAAGGACTAGGTGATGGGTATTCCTGATGCGTCACAAGGTGGGTGACGGGTG
CATCAGAAAGGGGATATCCATAGTCGAGAGGAAATCCGAACTGGAAAGAGGAATACGCAT
AAAGATGCAAGCACAAGAATAAAGATGGGTTCTGAGAAGCTTTTCTTAAAAAGCGGAATA
TTTCAACGAGTTTTTCGGGAAGAGCAAACGCTTTCCCGCGAGGAATCTATGTTTGCATTG
CATTCGTGCATGTGGTTGCATCCAGGGACGCCTGGGAAGTGCTGTGAAAGCATTGATTTT
AACTTATAAGGTTTTATTGAGTTTTTGGGTAGGTTCATACCAATTTTAAAAATATGCCCG
CCGTCCACTTAATAAGTGGGCAGCCACTTAGAAAATAAAGCAACAAAACCAGCCAGCGAA
TTCTCTCTCCTTATTCGGGTAGAACAGGAAAAAAAAAAAAAGAAAAACGATTTTATTTTT
TGAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q96J92
Definition sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo sapiens
Align length 90
Score (bit) 31.2
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949385|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N15, 5'
         (688 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom...    31   5.5  
sp|Q76E23|IF4G1_ARATH Eukaryotic translation initiation factor 4...    31   5.5  
sp|Q8IV01|SYT12_HUMAN Synaptotagmin-12 OS=Homo sapiens GN=SYT12 ...    31   7.1  
sp|P77495|PRPE_ECOLI Propionate--CoA ligase OS=Escherichia coli ...    30   9.2  
sp|Q6FF82|HTPG_ACIAD Chaperone protein htpG OS=Acinetobacter sp....    30   9.3  

>sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo
            sapiens GN=WNK4 PE=1 SV=1
          Length = 1243

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 23/90 (25%), Positives = 38/90 (42%)
 Frame = -1

Query: 337  GFPLDYGYPLSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHPSYDASEMSIPGWSD 158
            G P   G P+S  P+  + +   +PSPSPF P            +PS   +   +P +S 
Sbjct: 814  GNPFSPGTPISPGPIFPITSPPCHPSPSPFSP-----ISSQVSSNPSPHPTSSPLP-FSS 867

Query: 157  TSSRYSLSPIRCDASEVPVLGGLTDIPVHS 68
            ++  + +   +C  S +P     T  P  S
Sbjct: 868  STPEFPVPLSQCPWSSLPTTSPPTFSPTCS 897


>sp|Q76E23|IF4G1_ARATH Eukaryotic translation initiation factor 4G
           OS=Arabidopsis thaliana GN=EIF4G PE=2 SV=1
          Length = 1725

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
 Frame = -1

Query: 319 GYPLSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHPSYDASEMSIPGWSDTSSRYS 140
           G P S+   T L  H   P  S  + +    P++  L  PSY+++ M  P  S   +   
Sbjct: 391 GDPYSEGDSTALKPHSNPPPRSQPVSSFAPRPVN--LVQPSYNSNTMIYPPVSVPLNNGP 448

Query: 139 LSPIRCDASEVPVLGG-----LTDIPVHSAP 62
           +S  +      PV+ G     L + P H+AP
Sbjct: 449 MSSAQAPRYHYPVIDGSQRVQLINQPAHTAP 479


>sp|Q8IV01|SYT12_HUMAN Synaptotagmin-12 OS=Homo sapiens GN=SYT12
           PE=2 SV=1
          Length = 421

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 286 LVTHQEYPSPSPFLPNLRYNPLDDALCHPSYDASEMSIPGWS 161
           L T   +PSPSPF PN  Y  L         +A E  +P W+
Sbjct: 42  LWTSGSFPSPSPF-PNYDYRYLQQKYGESCAEAREKRVPAWN 82


>sp|P77495|PRPE_ECOLI Propionate--CoA ligase OS=Escherichia coli
           (strain K12) GN=prpE PE=3 SV=1
          Length = 628

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 117 ASHRMGDREYREEVSDHPGM 176
           A HR+G RE  E +S HPG+
Sbjct: 501 AGHRLGTREIEESISSHPGV 520


>sp|Q6FF82|HTPG_ACIAD Chaperone protein htpG OS=Acinetobacter sp.
           (strain ADP1) GN=htpG PE=3 SV=1
          Length = 640

 Score = 30.4 bits (67), Expect = 9.3
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
 Frame = -1

Query: 325 DYGYPLSDAPVTHLVTHQEYPSPSPFLPNLRYNPLD-------DALCHPSY 194
           +Y +    A + HLVTH  Y +P  FL  L  N  D       + + HP Y
Sbjct: 9   NYSFQAEVAQLLHLVTHSLYSNPEIFLRELISNASDACDKLRFEGINHPEY 59
tr_hit_id A3JQU8
Definition tr|A3JQU8|A3JQU8_9RHOB Putative uncharacterized protein OS=Rhodobacterales bacterium HTCC2150
Align length 40
Score (bit) 35.0
E-value 4.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949385|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N15, 5'
         (688 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3JQU8|A3JQU8_9RHOB Putative uncharacterized protein OS=Rhodo...    35   4.5  
tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis vini...    35   4.5  
tr|A9SS30|A9SS30_PHYPA Predicted protein OS=Physcomitrella paten...    35   5.8  
tr|A4QUJ8|A4QUJ8_MAGGR Chitin synthase OS=Magnaporthe grisea GN=...    35   5.8  
tr|B2HKC8|B2HKC8_MYCMM Conserved hypothetical secreted protein O...    34   7.6  
tr|Q744N2|Q744N2_MYCPA Putative uncharacterized protein OS=Mycob...    34   10.0 
tr|A0Q9U2|A0Q9U2_MYCA1 Putative uncharacterized protein OS=Mycob...    34   10.0 
tr|Q6W8T1|Q6W8T1_PICAN Global transcription activator Snf2p OS=P...    34   10.0 
tr|A7D7K5|A7D7K5_9EURY Putative uncharacterized protein OS=Halor...    34   10.0 

>tr|A3JQU8|A3JQU8_9RHOB Putative uncharacterized protein
           OS=Rhodobacterales bacterium HTCC2150 GN=RB2150_06543
           PE=4 SV=1
          Length = 203

 Score = 35.0 bits (79), Expect = 4.5
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 222 LTMLYVTHPMTHQRCPFPDGRILLPDTPCH--PSDVMRQK 109
           L +L+ THP  H  CPFPD        P H  PSD M+ +
Sbjct: 14  LKLLHATHPEVHTFCPFPDDVHTQKIAPVHRPPSDAMQME 53


>tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis
           vinifera GN=GSVIVT00015507001 PE=3 SV=1
          Length = 1010

 Score = 35.0 bits (79), Expect = 4.5
 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
 Frame = -1

Query: 328 LDYGYPLSDAPVTHLVTHQEYPSPSPFL-PNLRYNPLDDA-------------LCHPSYD 191
           LD+G   S +P+T    H    SP+  L PNLR +P+ DA                P Y 
Sbjct: 722 LDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAFSPTSSPGYS 781

Query: 190 ASEM----SIPGWSDTSSRYS 140
            S      S PG+S TS  YS
Sbjct: 782 PSSPGYSPSSPGYSPTSPGYS 802


>tr|A9SS30|A9SS30_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_230738 PE=4 SV=1
          Length = 315

 Score = 34.7 bits (78), Expect = 5.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 280 THQEYPSPSPFLPNLRYNPLDDALCH---PSY 194
           TH  +P+P+PF+PNL  NP     CH   PSY
Sbjct: 8   THPSFPTPAPFVPNLHPNPSSQP-CHSYQPSY 38


>tr|A4QUJ8|A4QUJ8_MAGGR Chitin synthase OS=Magnaporthe grisea
           GN=MGG_09551 PE=3 SV=1
          Length = 886

 Score = 34.7 bits (78), Expect = 5.8
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 337 GFPLDYGYPLSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHPSYDASEMSIPGWSD 158
           G PL +GY L DAP      +       P  P  R+ P D    H ++  + MS PG+  
Sbjct: 14  GHPLQHGYQLDDAPYGRPGLNSASNLDIPMGPG-RHTPSDQLQLHTAHSMANMSEPGYQQ 72

Query: 157 TSSRY 143
               Y
Sbjct: 73  QPGGY 77


>tr|B2HKC8|B2HKC8_MYCMM Conserved hypothetical secreted protein
           OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
           GN=MMAR_5220 PE=4 SV=1
          Length = 378

 Score = 34.3 bits (77), Expect = 7.6
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 310 LSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHP 200
           L DAPVT +V H E+P P+  LP     P D+ L  P
Sbjct: 303 LGDAPVTTVVQHDEWPEPAESLP----PPFDNRLAQP 335


>tr|Q744N2|Q744N2_MYCPA Putative uncharacterized protein
           OS=Mycobacterium paratuberculosis GN=MAP_0309c PE=4 SV=1
          Length = 335

 Score = 33.9 bits (76), Expect = 10.0
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 310 LSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHP 200
           L DAPVT +V H E+P P+  LP     P D+ L  P
Sbjct: 257 LGDAPVTTVVQHDEWPEPAESLP----PPYDNRLAQP 289


>tr|A0Q9U2|A0Q9U2_MYCA1 Putative uncharacterized protein
           OS=Mycobacterium avium (strain 104) GN=MAV_0395 PE=4
           SV=1
          Length = 382

 Score = 33.9 bits (76), Expect = 10.0
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 310 LSDAPVTHLVTHQEYPSPSPFLPNLRYNPLDDALCHP 200
           L DAPVT +V H E+P P+  LP     P D+ L  P
Sbjct: 304 LGDAPVTTVVQHDEWPEPAESLP----PPYDNRLAQP 336


>tr|Q6W8T1|Q6W8T1_PICAN Global transcription activator Snf2p
           OS=Pichia angusta GN=SNF2 PE=4 SV=1
          Length = 1461

 Score = 33.9 bits (76), Expect = 10.0
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
 Frame = -2

Query: 351 PLSSSDFLSTMDIPFLMHPSPTL*RIRNTHHLVLS-------YRTYGTIPLTMLYVT--- 202
           P  S   + +   P + HP P L    N  H+++S       +     +P T  +     
Sbjct: 202 PKQSMQPIQSHKTPQMPHPQPML----NNQHMMMSQQQQPQQHANQTPVPPTQQFPIPPQ 257

Query: 201 HPMTHQRCPFPDGRILLPDTPCHPSDVMRQKYP 103
           HP+  Q  P      +LP  P  P D M +KYP
Sbjct: 258 HPIMKQEPPKQQAAKMLPPHPPMPLDKMTEKYP 290


>tr|A7D7K5|A7D7K5_9EURY Putative uncharacterized protein
           OS=Halorubrum lacusprofundi ATCC 49239 GN=HlacDRAFT_2160
           PE=4 SV=1
          Length = 701

 Score = 33.9 bits (76), Expect = 10.0
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 265 PSPSPFLPNLRYNPLDDALCHPSYDASEMSIPGWSDTSSR 146
           P P P LP+L + P+D A+   S++A  +SIP +S  S R
Sbjct: 38  PQPQPALPDLFHVPVDRAV---SFEAESVSIPAYSSVSLR 74