DK949389 |
Clone id |
TST38A01NGRL0005_N19 |
Library |
TST38 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N19. 5' end sequence. |
Accession |
DK949389 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2015Contig1 |
Sequence |
GGCTGCCATGGCTGGTGGTAGGGTCGCTGCAGCAAGCAATCCTGTTGTTGAGGGACGATC GTCTCCCTCTATTACGTCCGAGCGAAGGTCTCTTAACCTTTCCTTTGCTGCCTCCTTCTC CTCCCTCTCCTTGAAAGAAAGAGCCAGGTGCATTAGGCGATTGGGCTTCCGACGGAATCA TTCTGTGCGGACATGGGCTATGGCCAAGGAGCTATATTTCAACAAGGATGGCTCCAGCAT GAGGAAATTGCAGGCTGGAGTAGACAAACTTGCAGATTTGGTGGGTGTTACCCTAGGCCC CAAGGGCAGAAATGTAGTGCTTGAGAGCAAATATGGACCTCCGAAAATCGTGAATGACGG AGTGACTGTTGCCAAGGAGGTTGAGCTTGAAGATCCTGTTGAAAATATTGGAGCAAGACT GGTCAGGCAAGCGGCTTCCAAAACAAATGATTTGGCTGGAGATGGAACCACCACATCAGT TGTTCTCGCACAGGGCCTTATTGCGGAGGGTGTCAAGATAGTTGCTGCAGGTGCAAATCC CATACAACTCTCAAGAGGTATTGAGAAGACAGTCAAGGCGTTGGTTGCAGAGCTCAAAAC CATGTCCAAAGAGGTGGAGGACAGTGAGCTTGCCGATGTCGCTGCCGTAAGTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P08927 |
Definition |
sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum |
Align length |
162 |
Score (bit) |
270.0 |
E-value |
5.0e-72 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV22 |
Definition |
tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
272.0 |
E-value |
2.0e-71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949389|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_N19, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea... 272 2e-71 tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome ... 268 3e-70 tr|A7P0B1|A7P0B1_VITVI Chromosome chr6 scaffold_3, whole genome ... 268 3e-70 tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tub... 264 4e-69 tr|B6THN2|B6THN2_MAIZE RuBisCO large subunit-binding protein sub... 262 2e-68 tr|B6SH83|B6SH83_MAIZE RuBisCO large subunit-binding protein sub... 262 2e-68 tr|A9RKJ5|A9RKJ5_PHYPA Predicted protein OS=Physcomitrella paten... 262 2e-68 tr|Q0W9E2|Q0W9E2_SOLCO Beta chaperonin 60 OS=Solanum commersonii... 261 2e-68 tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subs... 261 3e-68 tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza... 261 3e-68 tr|A9TNZ2|A9TNZ2_PHYPA Predicted protein OS=Physcomitrella paten... 260 5e-68 tr|A9RLL2|A9RLL2_PHYPA Predicted protein OS=Physcomitrella paten... 260 5e-68 tr|Q9FHA9|Q9FHA9_ARATH RuBisCO subunit binding-protein beta subu... 259 8e-68 tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subu... 259 8e-68 tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Popul... 259 8e-68 tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subs... 258 2e-67 tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza... 258 2e-67 tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza... 258 2e-67 tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa OS=Arab... 255 1e-66 tr|A7PNB9|A7PNB9_VITVI Chromosome chr1 scaffold_22, whole genome... 244 3e-63 tr|Q9C667|Q9C667_ARATH Chaperonin, putative OS=Arabidopsis thali... 232 2e-59 tr|Q56XN6|Q56XN6_ARATH Chaperonin OS=Arabidopsis thaliana GN=At1... 232 2e-59 tr|A7Y7L7|A7Y7L7_PRUDU Putative GloEL protein:chaperonin, 60kDa ... 228 3e-58 tr|A4S076|A4S076_OSTLU Chaperonin 60 beta chain, chloroplast OS=... 224 3e-57 tr|Q015D7|Q015D7_OSTTA RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SU... 223 1e-56 tr|B8BJN0|B8BJN0_ORYSI Putative uncharacterized protein OS=Oryza... 222 2e-56 tr|A8ITH8|A8ITH8_CHLRE Chaperonin 60B2 OS=Chlamydomonas reinhard... 215 2e-54 tr|A8JE91|A8JE91_CHLRE Chaperonin 60B1 OS=Chlamydomonas reinhard... 212 1e-53 tr|P93571|P93571_SOLTU Chaperonin-60 beta subunit (Fragment) OS=... 206 1e-51 tr|A3AU66|A3AU66_ORYSJ Putative uncharacterized protein OS=Oryza... 192 2e-47
>tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 617
Score = 272 bits (695), Expect = 2e-71 Identities = 142/161 (88%), Positives = 152/161 (94%) Frame = +2
Query: 173 RNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIV 352 R V T AMAKELYFNKDGS+ +KLQAGV+KLADLVGVTLGPKGRNVVLESKYG PKIV Sbjct: 63 REQVVNTRAMAKELYFNKDGSATKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIV 122
Query: 353 NDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAG 532 NDGVTVAKEVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVK+VAAG Sbjct: 123 NDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIGEGVKVVAAG 182
Query: 533 ANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 ANPIQ++RGIEKTVKALV+ELK+ SKEVEDSELADVAAVSA Sbjct: 183 ANPIQITRGIEKTVKALVSELKSFSKEVEDSELADVAAVSA 223
>tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034341001 PE=3 SV=1 Length = 634
Score = 268 bits (684), Expect = 3e-70 Identities = 139/158 (87%), Positives = 149/158 (94%) Frame = +2
Query: 182 SVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDG 361 S + AMAKELYFNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKIVNDG Sbjct: 58 SPKVRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG 117
Query: 362 VTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANP 541 VTVA+EVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLI EGVK+VAAGANP Sbjct: 118 VTVAREVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANP 177
Query: 542 IQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 +Q++RGIE T KALVAELK MSKEVEDSELADVAAVSA Sbjct: 178 VQITRGIENTTKALVAELKLMSKEVEDSELADVAAVSA 215
>tr|A7P0B1|A7P0B1_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024837001 PE=3 SV=1 Length = 606
Score = 268 bits (684), Expect = 3e-70 Identities = 139/162 (85%), Positives = 152/162 (93%) Frame = +2
Query: 170 RRNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKI 349 RR S R AMAK+LYFNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKYG PKI Sbjct: 53 RRTRSPRINAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKI 112
Query: 350 VNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAA 529 VNDGVTVAKEVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAA Sbjct: 113 VNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAA 172
Query: 530 GANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 GANP+ ++RGIEKT K+LVAELK +SKEVEDSELADVAAVSA Sbjct: 173 GANPVLITRGIEKTTKSLVAELKLISKEVEDSELADVAAVSA 214
>tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tuberosum PE=2 SV=1 Length = 599
Score = 264 bits (674), Expect = 4e-69 Identities = 137/167 (82%), Positives = 152/167 (91%) Frame = +2
Query: 155 RRLGFRRNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKY 334 R + R++ A AKEL+FNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKY Sbjct: 39 RNVALRKSRRPTILAAAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKY 98
Query: 335 GPPKIVNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 514 G PKIVNDGVTVA+EVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGV Sbjct: 99 GAPKIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGV 158
Query: 515 KIVAAGANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 K+VAAGANP+ ++RGIEKT KALVAELK MSKEVEDSELADVAAVSA Sbjct: 159 KVVAAGANPVLITRGIEKTAKALVAELKNMSKEVEDSELADVAAVSA 205
>tr|B6THN2|B6THN2_MAIZE RuBisCO large subunit-binding protein subunit beta OS=Zea mays PE=2 SV=1 Length = 605
Score = 262 bits (669), Expect = 2e-68 Identities = 137/167 (82%), Positives = 155/167 (92%) Frame = +2
Query: 155 RRLGFRRNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKY 334 R++ RR ++ R A AKEL+FNKDGS++RK+Q GV+KLADLVGVTLGPKGRNVVLESKY Sbjct: 41 RKMRPRRKYNFRVNA-AKELHFNKDGSAIRKMQNGVNKLADLVGVTLGPKGRNVVLESKY 99
Query: 335 GPPKIVNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 514 G PKIVNDGVTVAKEVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQG+I EGV Sbjct: 100 GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGV 159
Query: 515 KIVAAGANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 K+VAAGANP+Q++RGIEKT KALV+EL+ MSKEVEDSELADVAAVSA Sbjct: 160 KVVAAGANPVQITRGIEKTAKALVSELQKMSKEVEDSELADVAAVSA 206
>tr|B6SH83|B6SH83_MAIZE RuBisCO large subunit-binding protein subunit beta OS=Zea mays PE=2 SV=1 Length = 604
Score = 262 bits (669), Expect = 2e-68 Identities = 137/167 (82%), Positives = 155/167 (92%) Frame = +2
Query: 155 RRLGFRRNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKY 334 R++ RR ++ R A AKEL+FNKDGS++RK+Q GV+KLADLVGVTLGPKGRNVVLESKY Sbjct: 41 RKMRPRRKYNFRVNA-AKELHFNKDGSAIRKMQNGVNKLADLVGVTLGPKGRNVVLESKY 99
Query: 335 GPPKIVNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 514 G PKIVNDGVTVAKEVELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQG+I EGV Sbjct: 100 GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGV 159
Query: 515 KIVAAGANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 K+VAAGANP+Q++RGIEKT KALV+EL+ MSKEVEDSELADVAAVSA Sbjct: 160 KVVAAGANPVQITRGIEKTAKALVSELQKMSKEVEDSELADVAAVSA 206
>tr|A9RKJ5|A9RKJ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115702 PE=3 SV=1 Length = 548
Score = 262 bits (669), Expect = 2e-68 Identities = 134/151 (88%), Positives = 147/151 (97%) Frame = +2
Query: 203 AKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEV 382 AK+L+FNKDGS+++K+QAGVDKLADLVGVTLGPKGRNVVLESKYG PKIVNDGVTVAKEV Sbjct: 6 AKQLHFNKDGSAIKKMQAGVDKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV 65
Query: 383 ELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGI 562 ELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+Q++RGI Sbjct: 66 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGI 125
Query: 563 EKTVKALVAELKTMSKEVEDSELADVAAVSA 655 EKTV ALV ELK +SKEVEDSELADVAAVSA Sbjct: 126 EKTVAALVKELKKLSKEVEDSELADVAAVSA 156
>tr|Q0W9E2|Q0W9E2_SOLCO Beta chaperonin 60 OS=Solanum commersonii GN=cbn60 PE=2 SV=1 Length = 600
Score = 261 bits (668), Expect = 2e-68 Identities = 135/167 (80%), Positives = 152/167 (91%) Frame = +2
Query: 155 RRLGFRRNHSVRTWAMAKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKY 334 R + R++ + A AKEL+FNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKY Sbjct: 39 RNVALRKSRRLTILAAAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKY 98
Query: 335 GPPKIVNDGVTVAKEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 514 G PKIVNDGVTVA+EVELEDPV+NIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGV Sbjct: 99 GAPKIVNDGVTVAREVELEDPVKNIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGV 158
Query: 515 KIVAAGANPIQLSRGIEKTVKALVAELKTMSKEVEDSELADVAAVSA 655 K+VAAGANP+ ++RGIEKT KALVAELK MSKEVEDSEL DVAAVSA Sbjct: 159 KVVAAGANPVLITRGIEKTAKALVAELKNMSKEVEDSELPDVAAVSA 205
>tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subsp. japonica GN=P0541H01.20 PE=2 SV=1 Length = 601
Score = 261 bits (666), Expect = 3e-68 Identities = 133/151 (88%), Positives = 146/151 (96%) Frame = +2
Query: 203 AKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEV 382 AKELYFNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EV Sbjct: 57 AKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREV 116
Query: 383 ELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGI 562 ELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+Q++RGI Sbjct: 117 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGI 176
Query: 563 EKTVKALVAELKTMSKEVEDSELADVAAVSA 655 EKT KALV ELK +SKEVEDSELADVAAVSA Sbjct: 177 EKTAKALVEELKKLSKEVEDSELADVAAVSA 207
>tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019078 PE=3 SV=1 Length = 609
Score = 261 bits (666), Expect = 3e-68 Identities = 133/151 (88%), Positives = 146/151 (96%) Frame = +2
Query: 203 AKELYFNKDGSSMRKLQAGVDKLADLVGVTLGPKGRNVVLESKYGPPKIVNDGVTVAKEV 382 AKELYFNKDGS+++KLQ GV+KLADLVGVTLGPKGRNVVLESKYG P+IVNDGVTVA+EV Sbjct: 57 AKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREV 116
Query: 383 ELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVAAGANPIQLSRGI 562 ELEDPVENIGA+LVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVK+VAAGANP+Q++RGI Sbjct: 117 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGI 176
Query: 563 EKTVKALVAELKTMSKEVEDSELADVAAVSA 655 EKT KALV ELK +SKEVEDSELADVAAVSA Sbjct: 177 EKTAKALVEELKKLSKEVEDSELADVAAVSA 207
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