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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949413
Clone id TST38A01NGRL0005_O20
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_O20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTT
TCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAG
GTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGAC
AGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCC
AGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCC
GACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATG
TTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGC
GAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTG
GGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATT
CTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGAT
CCCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTT
GCTG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 186
Score (bit) 345.0
E-value 2.0e-94
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_O20, 5'
         (664 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   345   2e-94
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   342   1e-93
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   341   2e-93
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   341   2e-93
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   339   7e-93
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   339   7e-93
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   339   9e-93
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   339   9e-93
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   338   1e-92
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   338   1e-92
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   338   1e-92
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   338   2e-92
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   337   4e-92
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   336   6e-92
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   336   7e-92
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   335   1e-91
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   335   1e-91
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   335   1e-91
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   334   2e-91
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   334   2e-91
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   334   3e-91
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   333   4e-91
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   333   4e-91
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   333   4e-91
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   333   6e-91
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   332   8e-91
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   332   1e-90
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   332   1e-90
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   331   2e-90

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  345 bits (884), Expect = 2e-94
 Identities = 162/186 (87%), Positives = 174/186 (93%), Gaps = 4/186 (2%)
 Frame = +1

Query: 118 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 285
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 286 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 465
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 466 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 645
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 646 DPEAFA 663
           DPEAFA
Sbjct: 199 DPEAFA 204


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  342 bits (877), Expect = 1e-93
 Identities = 168/198 (84%), Positives = 183/198 (92%), Gaps = 3/198 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 249
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 250 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 429
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 430 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 609
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 610 PGGSFDPLGLADDPEAFA 663
           PGGSFDPLGLADDP+ FA
Sbjct: 193 PGGSFDPLGLADDPDTFA 210



 Score = 30.8 bits (68), Expect = 6.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 259 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 408
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  341 bits (875), Expect = 2e-93
 Identities = 170/191 (89%), Positives = 173/191 (90%), Gaps = 1/191 (0%)
 Frame = +1

Query: 94  KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 270
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 271 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 450
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 451 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 630
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 631 LGLADDPEAFA 663
           LGLADDPEAFA
Sbjct: 197 LGLADDPEAFA 207


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  341 bits (875), Expect = 2e-93
 Identities = 163/179 (91%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
 Frame = +1

Query: 133 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 306
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 307 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 486
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 487 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFA 663
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFA 207


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  341 bits (874), Expect = 2e-93
 Identities = 161/182 (88%), Positives = 169/182 (92%), Gaps = 4/182 (2%)
 Frame = +1

Query: 130 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 297
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 298 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 477
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 478 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 657
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207

Query: 658 FA 663
           FA
Sbjct: 208 FA 209


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  339 bits (870), Expect = 7e-93
 Identities = 161/181 (88%), Positives = 169/181 (93%), Gaps = 4/181 (2%)
 Frame = +1

Query: 133 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 300
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 301 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 480
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 481 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 660
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 208

Query: 661 A 663
           A
Sbjct: 209 A 209


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  339 bits (870), Expect = 7e-93
 Identities = 161/179 (89%), Positives = 169/179 (94%), Gaps = 2/179 (1%)
 Frame = +1

Query: 133 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 306
           G A+ +MRKT SKS  S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 307 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 486
           ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 487 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFA 663
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFA
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFA 197


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  339 bits (869), Expect = 9e-93
 Identities = 165/198 (83%), Positives = 177/198 (89%), Gaps = 3/198 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 249
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 250 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 429
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 430 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 609
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 610 PGGSFDPLGLADDPEAFA 663
           PGGSFDPLGLA+DPEAFA
Sbjct: 190 PGGSFDPLGLAEDPEAFA 207


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  339 bits (869), Expect = 9e-93
 Identities = 166/199 (83%), Positives = 175/199 (87%), Gaps = 4/199 (2%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 246
           G+AV  P S   +     G  + +MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15  GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 247 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 426
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 427 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 606
           VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 607 YPGGSFDPLGLADDPEAFA 663
           YPGGSFDPLGLADDPEAFA
Sbjct: 190 YPGGSFDPLGLADDPEAFA 208


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  338 bits (868), Expect = 1e-92
 Identities = 161/181 (88%), Positives = 168/181 (92%), Gaps = 4/181 (2%)
 Frame = +1

Query: 133 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 300
           G  +  MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 301 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 480
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 481 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 660
           GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 208

Query: 661 A 663
           A
Sbjct: 209 A 209
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 195
Score (bit) 353.0
E-value 5.0e-96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_O20, 5'
         (664 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   353   5e-96
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   350   4e-95
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   349   1e-94
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   349   1e-94
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   348   2e-94
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   348   2e-94
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   345   1e-93
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   345   1e-93
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   345   2e-93
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   344   2e-93
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   343   5e-93
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   343   5e-93
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   343   7e-93
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   342   1e-92
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   342   1e-92
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   342   2e-92
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   342   2e-92
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   342   2e-92
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   342   2e-92
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   342   2e-92
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   342   2e-92
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   341   2e-92
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   341   3e-92
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   341   3e-92
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   340   4e-92
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   340   4e-92
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   340   5e-92
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   340   5e-92
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   340   5e-92
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   340   6e-92

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  353 bits (906), Expect = 5e-96
 Identities = 171/195 (87%), Positives = 181/195 (92%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 258
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 259 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 438
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 439 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 618
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 619 SFDPLGLADDPEAFA 663
           SFDPLGLADDP+ FA
Sbjct: 193 SFDPLGLADDPDTFA 207


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  350 bits (898), Expect = 4e-95
 Identities = 170/200 (85%), Positives = 182/200 (91%), Gaps = 5/200 (2%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 243
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 244 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 423
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 424 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 603
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 604 IYPGGSFDPLGLADDPEAFA 663
           IYPGGSFDPLGLADDP+AFA
Sbjct: 193 IYPGGSFDPLGLADDPDAFA 212


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  349 bits (895), Expect = 1e-94
 Identities = 171/197 (86%), Positives = 182/197 (92%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 194 GGSFDPLGLADDPDTFA 210


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  349 bits (895), Expect = 1e-94
 Identities = 171/197 (86%), Positives = 182/197 (92%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 194 GGSFDPLGLADDPDTFA 210


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  348 bits (893), Expect = 2e-94
 Identities = 170/197 (86%), Positives = 182/197 (92%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 193 GGSFDPLGLADDPDTFA 209


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  348 bits (892), Expect = 2e-94
 Identities = 169/197 (85%), Positives = 183/197 (92%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 193 GGSFDPLGLADDPDTFA 209


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  345 bits (885), Expect = 1e-93
 Identities = 168/197 (85%), Positives = 182/197 (92%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 193 GGSFDPLGLADDPDTFA 209


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  345 bits (885), Expect = 1e-93
 Identities = 170/197 (86%), Positives = 181/197 (91%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 193 GGSFDPLGLADDPDTFA 209


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  345 bits (884), Expect = 2e-93
 Identities = 162/186 (87%), Positives = 174/186 (93%), Gaps = 4/186 (2%)
 Frame = +1

Query: 118 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 285
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 286 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 465
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 466 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 645
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 646 DPEAFA 663
           DPEAFA
Sbjct: 199 DPEAFA 204


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  344 bits (883), Expect = 2e-93
 Identities = 165/197 (83%), Positives = 184/197 (93%), Gaps = 2/197 (1%)
 Frame = +1

Query: 79  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 252
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 253 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 432
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 433 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 612
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 613 GGSFDPLGLADDPEAFA 663
           GGSFDPLGLADDP+ FA
Sbjct: 193 GGSFDPLGLADDPDTFA 209