DK949460 |
Clone id |
TST38A01NGRL0006_A20 |
Library |
TST38 |
Length |
719 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_A20. 5' end sequence. |
Accession |
DK949460 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3973Contig1 |
Sequence |
TGCACCAACTAAGCCATGCTCCCTGCGCTGTAGCCTTCAGGGAGGGCCAGCTTCCAAGAG CTGCTGAACATGCGACCTTGGTTGCGGGCAGACGACCAGGAAGTGTATTGTGTAAAGCAT TTGGAGTACAGCAAGAAGATGAGGGCAAGGTCTTGCTCAAGAAGAGAGGTAGCGAAATTG CAAGAGATTTAAGGGGAACTTGCATATATCTTGTTGGTATGACAGGAAGTGGGAAGAGTA AGATCGGCCAGACCCTGGCCGAAGCTGTAGGCTACCACTTTTTCGATAGTGATAAGCTCA TTGAAAAAGCTGCTGGTGATGGTCGCACTGTATCTCAGTTGATGGAAGAGGAGGACGAGA AAAGTTTCAGAGATGTTGAGACGGAAGTGCTGAAGCAACTCTCTTGCATGGGGCGTTTGG TGGTTGCCACTGGTGATGGTATAGTTTTGCGACCATTTAATTGGAGTTACTTGAGGCATG GTGTCACTGTCTGGCTTGATGTGCCTGTTGAAGCTTTGGCAATCAGAGTTGGTGAAGCTG GTGAAAAGTCACAGCCAATGCTGGGCCAGACGACAGATGCCTCAACTCAAGGCCAGGCTG TTGAGAAGCTTTCTGACATCCTTAAAACAAGGGAGCCGTTTTATGCAGATTCCGATGCCA CAGTCTCCTTTCAAAAAGTAGCTTCTCAAATAGGGTTAGATGGGTGTGGATAGTCTGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q00497 |
Definition |
sp|Q00497|AROK_SOLLC Shikimate kinase, chloroplastic OS=Solanum lycopersicum |
Align length |
184 |
Score (bit) |
164.0 |
E-value |
3.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUN9 |
Definition |
tr|A9NUN9|A9NUN9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
186 |
Score (bit) |
194.0 |
E-value |
5.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949460|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_A20, 5' (719 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUN9|A9NUN9_PICSI Putative uncharacterized protein OS=Picea... 194 5e-48 tr|A7QRN8|A7QRN8_VITVI Chromosome undetermined scaffold_151, who... 174 4e-42 tr|Q5NTH3|Q5NTH3_ORYSJ Shikimate kinase 2 OS=Oryza sativa subsp.... 172 2e-41 tr|Q0DDG0|Q0DDG0_ORYSJ Os06g0225800 protein (Fragment) OS=Oryza ... 172 2e-41 tr|B8B486|B8B486_ORYSI Putative uncharacterized protein OS=Oryza... 172 2e-41 tr|A5APW9|A5APW9_VITVI Putative uncharacterized protein OS=Vitis... 172 3e-41 tr|Q5NTH4|Q5NTH4_ORYSJ Shikimate kinase 1 OS=Oryza sativa subsp.... 169 1e-40 tr|A3ABD4|A3ABD4_ORYSJ Putative uncharacterized protein OS=Oryza... 169 1e-40 tr|A2X9M5|A2X9M5_ORYSI Putative uncharacterized protein OS=Oryza... 169 1e-40 tr|B6UDH4|B6UDH4_MAIZE Shikimate kinase OS=Zea mays PE=2 SV=1 168 3e-40 tr|B4FPS0|B4FPS0_MAIZE Putative uncharacterized protein OS=Zea m... 168 3e-40 tr|B4F8E9|B4F8E9_MAIZE Putative uncharacterized protein OS=Zea m... 168 3e-40 tr|B6TNA7|B6TNA7_MAIZE Shikimate kinase OS=Zea mays PE=2 SV=1 167 5e-40 tr|Q7X7H9|Q7X7H9_ORYSJ OSJNBb0079B02.2 protein (Shikimate kinase... 167 6e-40 tr|Q01HY3|Q01HY3_ORYSA OSIGBa0138H21-OSIGBa0138E01.13 protein OS... 167 6e-40 tr|Q30CZ9|Q30CZ9_FAGSY Putative shikimate kinase OS=Fagus sylvat... 162 2e-38 tr|A9SQ82|A9SQ82_PHYPA Predicted protein OS=Physcomitrella paten... 161 3e-38 tr|A7P9Z7|A7P9Z7_VITVI Chromosome chr14 scaffold_9, whole genome... 155 2e-36 tr|Q8GY88|Q8GY88_ARATH At4g39540 OS=Arabidopsis thaliana GN=At4g... 154 4e-36 tr|B8AV75|B8AV75_ORYSI Putative uncharacterized protein OS=Oryza... 150 8e-35 tr|A5AZY1|A5AZY1_VITVI Putative uncharacterized protein (Chromos... 150 8e-35 tr|A8MRG1|A8MRG1_ARATH Uncharacterized protein At2g21940.3 OS=Ar... 141 4e-32 tr|A0ZKR8|A0ZKR8_NODSP Shikimate kinase OS=Nodularia spumigena C... 139 2e-31 tr|Q115N2|Q115N2_TRIEI Shikimate kinase OS=Trichodesmium erythra... 136 2e-30 tr|B0JFW8|B0JFW8_MICAN Shikimate kinase OS=Microcystis aeruginos... 136 2e-30 tr|B4WPT8|B4WPT8_9SYNE Shikimate kinase domain protein OS=Synech... 135 2e-30 tr|A8YLM1|A8YLM1_MICAE AroK protein OS=Microcystis aeruginosa PC... 135 2e-30 tr|Q4C4W3|Q4C4W3_CROWT Shikimate kinase OS=Crocosphaera watsonii... 132 3e-29 tr|B4B549|B4B549_9CHRO Shikimate kinase OS=Cyanothece sp. PCC 78... 129 2e-28 tr|Q9LW20|Q9LW20_ARATH Similarity to shikimate kinase (At3g26900... 129 2e-28
>tr|A9NUN9|A9NUN9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 318
Score = 194 bits (493), Expect = 5e-48 Identities = 96/186 (51%), Positives = 136/186 (73%) Frame = +3
Query: 138 DEGKVLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAG 317 D ++LKK+ EI L+G CIYLVGM GSGK+ +G+ L+E +GY+FFDSD+L+E+A+G Sbjct: 100 DHETLILKKKAEEIIPHLKGKCIYLVGMMGSGKTTVGKILSEVLGYYFFDSDQLVEEASG 159
Query: 318 DGRTVSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWL 497 G +V+Q+ +E +E+ FRD E+EVLKQLS M RLV+ATG G V+RP NW+Y+R G+TVWL Sbjct: 160 -GASVAQIFKERNEQGFRDSESEVLKQLSTMYRLVIATGGGAVVRPQNWNYMRQGITVWL 218
Query: 498 DVPVEALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQK 677 DVP+EALA RV G +S+P+LGQ +D QA+ +L+ + + R Y SD VS + Sbjct: 219 DVPLEALAARVVAVGTESRPLLGQASD-DCYSQALTRLTKLYEDRAEAYKSSDVKVSLRD 277
Query: 678 VASQIG 695 +A ++G Sbjct: 278 IAVELG 283
>tr|A7QRN8|A7QRN8_VITVI Chromosome undetermined scaffold_151, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005432001 PE=4 SV=1 Length = 278
Score = 174 bits (442), Expect = 4e-42 Identities = 91/188 (48%), Positives = 133/188 (70%), Gaps = 1/188 (0%) Frame = +3
Query: 141 EGKVLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGD 320 +G LLKK+G E+A +L G CI+LVGM GSGK+ +G+ L+EA+GY F DSD +EKA G Sbjct: 44 DGNWLLKKKGQEVASNLNGRCIFLVGMMGSGKTTVGKILSEALGYSFVDSDTFVEKAVG- 102
Query: 321 GRTVSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLD 500 G +VSQ+ + EK FRD E+E L++L+ + + VVATG G V+RP NW Y++ GV+V+LD Sbjct: 103 GTSVSQIFNQCGEKFFRDYESEALRKLASIPKQVVATGGGAVVRPINWKYMKQGVSVFLD 162
Query: 501 VPVEALAIRVGEAGEKSQPMLG-QTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQK 677 VP++ LA R+ + G S+P+L ++ DA T +A L + K R YA++DATVS Q Sbjct: 163 VPLDTLARRIADVGTDSRPLLHFESGDAYT--KAFVGLFTLSKKRTEAYANADATVSLQH 220
Query: 678 VASQIGLD 701 +A+++GL+ Sbjct: 221 IAARLGLE 228
>tr|Q5NTH3|Q5NTH3_ORYSJ Shikimate kinase 2 OS=Oryza sativa subsp. japonica GN=OsSK2 PE=2 SV=1 Length = 307
Score = 172 bits (437), Expect = 2e-41 Identities = 90/184 (48%), Positives = 127/184 (69%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS + + LAE +GY FFDSDKL+E+A G + Sbjct: 79 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMP-S 137
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ +E E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 138 VAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 197
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + + A KLS + + R YA++DA VS +++A++ Sbjct: 198 DALARRIAQVGTASRPLLDQPS-SDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAK 256
Query: 690 IGLD 701 G D Sbjct: 257 QGHD 260
>tr|Q0DDG0|Q0DDG0_ORYSJ Os06g0225800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0225800 PE=4 SV=1 Length = 264
Score = 172 bits (437), Expect = 2e-41 Identities = 90/184 (48%), Positives = 127/184 (69%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS + + LAE +GY FFDSDKL+E+A G + Sbjct: 36 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMP-S 94
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ +E E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 95 VAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 154
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + + A KLS + + R YA++DA VS +++A++ Sbjct: 155 DALARRIAQVGTASRPLLDQPS-SDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAK 213
Query: 690 IGLD 701 G D Sbjct: 214 QGHD 217
>tr|B8B486|B8B486_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22231 PE=4 SV=1 Length = 307
Score = 172 bits (437), Expect = 2e-41 Identities = 90/184 (48%), Positives = 127/184 (69%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS + + LAE +GY FFDSDKL+E+A G + Sbjct: 79 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMP-S 137
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ +E E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 138 VAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 197
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + + A KLS + + R YA++DA VS +++A++ Sbjct: 198 DALARRIAQVGTASRPLLDQPS-SDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAK 256
Query: 690 IGLD 701 G D Sbjct: 257 QGHD 260
>tr|A5APW9|A5APW9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016550 PE=4 SV=1 Length = 294
Score = 172 bits (435), Expect = 3e-41 Identities = 90/188 (47%), Positives = 131/188 (69%), Gaps = 1/188 (0%) Frame = +3
Query: 141 EGKVLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGD 320 +G LLKK+G E+A +L G CI+LVGM GSGK+ +G+ L+E +GY F DSD +EKA G Sbjct: 76 DGNWLLKKKGQEVASNLNGRCIFLVGMMGSGKTTVGKILSEXLGYSFVDSDTFVEKAVG- 134
Query: 321 GRTVSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLD 500 G +VSQ+ + EK FRD E+E L++L+ + + VVATG G V+RP NW Y++ GV+V+LD Sbjct: 135 GTSVSQIFNQCGEKFFRDYESEALRKLASIPKQVVATGGGAVVRPINWKYMKQGVSVFLD 194
Query: 501 VPVEALAIRVGEAGEKSQPMLG-QTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQK 677 VP++ LA R+ + G S+P+L ++ DA T +A L + K R YA++DATVS Q Sbjct: 195 VPLDXLARRIADVGTDSRPLLHFESGDAYT--KAFVGLFTLSKKRTEAYANADATVSLQH 252
Query: 678 VASQIGLD 701 +A+ +GL+ Sbjct: 253 IAASLGLE 260
>tr|Q5NTH4|Q5NTH4_ORYSJ Shikimate kinase 1 OS=Oryza sativa subsp. japonica GN=OsSK1 PE=2 SV=1 Length = 308
Score = 169 bits (429), Expect = 1e-40 Identities = 88/184 (47%), Positives = 125/184 (67%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS +G+ ++E +GY FFDSDKL+E+A G + Sbjct: 81 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMP-S 139
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ + E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 140 VAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 199
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + A KLS + + R YA++D VS +++AS+ Sbjct: 200 DALARRIAKVGTASRPLLDQPS-GDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASK 258
Query: 690 IGLD 701 G D Sbjct: 259 QGHD 262
>tr|A3ABD4|A3ABD4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008106 PE=4 SV=1 Length = 444
Score = 169 bits (429), Expect = 1e-40 Identities = 88/184 (47%), Positives = 125/184 (67%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS +G+ ++E +GY FFDSDKL+E+A G + Sbjct: 81 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMP-S 139
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ + E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 140 VAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 199
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + A KLS + + R YA++D VS +++AS+ Sbjct: 200 DALARRIAKVGTASRPLLDQPS-GDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASK 258
Query: 690 IGLD 701 G D Sbjct: 259 QGHD 262
>tr|A2X9M5|A2X9M5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08943 PE=4 SV=1 Length = 401
Score = 169 bits (429), Expect = 1e-40 Identities = 88/184 (47%), Positives = 125/184 (67%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS +G+ ++E +GY FFDSDKL+E+A G + Sbjct: 81 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMP-S 139
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ + E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 140 VAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 199
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + A KLS + + R YA++D VS +++AS+ Sbjct: 200 DALARRIAKVGTASRPLLDQPS-GDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASK 258
Query: 690 IGLD 701 G D Sbjct: 259 QGHD 262
>tr|B6UDH4|B6UDH4_MAIZE Shikimate kinase OS=Zea mays PE=2 SV=1 Length = 307
Score = 168 bits (426), Expect = 3e-40 Identities = 87/184 (47%), Positives = 124/184 (67%) Frame = +3
Query: 150 VLLKKRGSEIARDLRGTCIYLVGMTGSGKSKIGQTLAEAVGYHFFDSDKLIEKAAGDGRT 329 +LLK++ E+ L G CIYLVGM GSGKS +G+ ++E +GY FFDSDKL+E+A G + Sbjct: 80 LLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMP-S 138
Query: 330 VSQLMEEEDEKSFRDVETEVLKQLSCMGRLVVATGDGIVLRPFNWSYLRHGVTVWLDVPV 509 V+Q+ + E FRD E+ VL+ LS M RLVVATG G V+RP NW Y++ G++VWLDVP+ Sbjct: 139 VAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKKGLSVWLDVPL 198
Query: 510 EALAIRVGEAGEKSQPMLGQTTDASTQGQAVEKLSDILKTREPFYADSDATVSFQKVASQ 689 +ALA R+ + G S+P+L Q + A KLS + + R YA++D VS +++A + Sbjct: 199 DALARRIAKVGTASRPLLDQPS-GDPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIACK 257
Query: 690 IGLD 701 G D Sbjct: 258 QGHD 261
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