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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949470
Clone id TST38A01NGRL0006_B06
Library
Length 646
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_B06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGACTCACACACGTACACAAGCCTCACATCTCACATGCAGTGTGAGAGCTCCGTGTGTGT
GTGTGTGTACGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGCGCTCCCAAGCAGCACA
ATATCAAGAAGCTTGGCTCACCAATTTTTGCGTCTGTGCGTACCTGGTGTATGCTTCTCG
CAGCACAACACACAATAATATCTAGTTTTCTGTACATTTGTGCATACAAAGTAGCAAGAA
TGGTAGATTTTGAACGGGAAGAGCGACGGGTATTCGTGCGCAAATGGGCCGGGTTTGTAT
CCGCCATGTGGTTGATGGTCTTTTCGGGAAACTATGCATATGCAAACTACTCAAAGGCAT
TGAAGGTTTTGTTGGGCATCAATCAGAGCCACCTAAATGGCCTCAGTGTTTCAAGGGACA
TCGGAGACTCATGTGGCGGCATTATTGGCGGTATCCTCAGCAACTACCTGCCCCCTTGGG
TTCTCCTCTGCATTGCCGCTACTTTTGGATTTCTTGGTTATGGAATCCAATGGCTCGTCG
TCGCTCGAGTCATCGATCCCCTGCCTTACTGGATTATGGCAATGTCCTTAATGGCAGCAG
GAATTTGCATAGCATGGATGAACACAATAGTATTCAATGCATCTGT
■■Homology search results ■■ -
sp_hit_id P09166
Definition sp|P09166|AERA_AERTR Aerolysin OS=Aeromonas trota
Align length 29
Score (bit) 32.0
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949470|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_B06, 5'
         (646 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09166|AERA_AERTR Aerolysin OS=Aeromonas trota GN=aerA PE=3 SV=1    32   2.9  
sp|Q6BN11|MCH1_DEBHA Probable transporter MCH1 OS=Debaryomyces h...    31   4.8  

>sp|P09166|AERA_AERTR Aerolysin OS=Aeromonas trota GN=aerA PE=3 SV=1
          Length = 492

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 327 PKRPSTTWRIQTRPICARIPVALPVQNLP 241
           P + STTW   TRP  A IPV LP  N+P
Sbjct: 90  PGKASTTWCYPTRPATAEIPV-LPAFNIP 117


>sp|Q6BN11|MCH1_DEBHA Probable transporter MCH1 OS=Debaryomyces
           hansenii GN=MCH1 PE=3 SV=2
          Length = 486

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +3

Query: 294 FVSAMWLMVFSGNYAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXLSNYLP 473
           F+S    +       ++ +S +L  L GIN  H+N ++    IG          L++   
Sbjct: 34  FISLFSCLTSGSIMLFSLFSSSLHELYGINYLHINFIASLSAIGMYLCLPVLGYLADCYG 93

Query: 474 PWVLLCIAATFGFLGYGIQWLVVARVIDPLPY-WIMAMSLMAAGIC 608
           P +L  I+  F    Y     V ++VI  L Y  +M + L A GIC
Sbjct: 94  PSLLSLISIWFFVPSY----FVNSQVIKSLEYNNVMKIHLYAFGIC 135
tr_hit_id B8LRH5
Definition tr|B8LRH5|B8LRH5_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 118
Score (bit) 118.0
E-value 4.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949470|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_B06, 5'
         (646 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LRH5|B8LRH5_PICSI Putative uncharacterized protein OS=Picea...   118   4e-25
tr|Q69JG4|Q69JG4_ORYSJ Os09g0536700 protein OS=Oryza sativa subs...   114   7e-24
tr|B8BDX1|B8BDX1_ORYSI Putative uncharacterized protein OS=Oryza...   114   7e-24
tr|B7EKL1|B7EKL1_ORYSJ cDNA clone:J023012O05, full insert sequen...   114   7e-24
tr|A3C4M6|A3C4M6_ORYSJ Putative uncharacterized protein OS=Oryza...   114   7e-24
tr|B7FLG8|B7FLG8_MEDTR Putative uncharacterized protein OS=Medic...   112   1e-23
tr|Q9SLF1|Q9SLF1_ARATH Nodulin-like protein (At2g16660/T24I21.7)...   112   2e-23
tr|Q9SW40|Q9SW40_ARATH Putative uncharacterized protein AT4g3495...   107   6e-22
tr|Q6NKP5|Q6NKP5_ARATH At4g34950 OS=Arabidopsis thaliana PE=2 SV=1    107   6e-22
tr|O49604|O49604_ARATH EF-1 alpha-like protein (Fragment) OS=Ara...   107   6e-22
tr|A7P897|A7P897_VITVI Chromosome chr3 scaffold_8, whole genome ...   106   1e-21
tr|A9RWI4|A9RWI4_PHYPA Predicted protein OS=Physcomitrella paten...   102   3e-20
tr|A9S8T3|A9S8T3_PHYPA Predicted protein OS=Physcomitrella paten...   101   4e-20
tr|A9RSI9|A9RSI9_PHYPA Predicted protein OS=Physcomitrella paten...    99   2e-19
tr|Q5PP19|Q5PP19_ARATH At5g45275 OS=Arabidopsis thaliana PE=2 SV=1     96   2e-18
tr|A7QS38|A7QS38_VITVI Chromosome undetermined scaffold_155, who...    93   1e-17
tr|Q8H6R3|Q8H6R3_PONTR Nodulin-like protein OS=Poncirus trifolia...    93   2e-17
tr|Q8LGK5|Q8LGK5_ARATH Putative uncharacterized protein OS=Arabi...    92   2e-17
tr|Q8H132|Q8H132_ARATH Putative uncharacterized protein At4g1945...    92   2e-17
tr|A7Q8X8|A7Q8X8_VITVI Chromosome chr9 scaffold_65, whole genome...    91   6e-17
tr|A7QKQ5|A7QKQ5_VITVI Chromosome chr2 scaffold_113, whole genom...    91   8e-17
tr|Q9C862|Q9C862_ARATH Putative uncharacterized protein T8E3.15 ...    90   1e-16
tr|A2YT18|A2YT18_ORYSI Putative uncharacterized protein OS=Oryza...    89   3e-16
tr|A7PSJ7|A7PSJ7_VITVI Chromosome chr6 scaffold_28, whole genome...    88   4e-16
tr|A5AIM4|A5AIM4_VITVI Putative uncharacterized protein OS=Vitis...    88   5e-16
tr|Q9SS92|Q9SS92_ARATH F4P13.17 protein OS=Arabidopsis thaliana ...    87   7e-16
tr|Q84W38|Q84W38_ARATH Putative uncharacterized protein At3g0163...    87   7e-16
tr|Q0JBY7|Q0JBY7_ORYSJ Os04g0502800 protein (Fragment) OS=Oryza ...    84   7e-15
tr|Q01I55|Q01I55_ORYSA OSIGBa0112M24.2 protein OS=Oryza sativa G...    84   7e-15
tr|Q6ZG27|Q6ZG27_ORYSJ Nodulin-like protein OS=Oryza sativa subs...    84   1e-14

>tr|B8LRH5|B8LRH5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 626

 Score =  118 bits (295), Expect = 4e-25
 Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   +GN Y ++NYS ALK +L +NQ  LN LSV++D+G +         
Sbjct: 16  KWVGFVTAIWVQAIAGNNYTFSNYSVALKSILDVNQVQLNNLSVAKDVGKA-FGLVAGFA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+YLP W++L I +  GFLGYG QWLV+++ I PLPYW M + L   G    WMNT V
Sbjct: 75  SDYLPAWLILLIGSLEGFLGYGAQWLVLSQRIRPLPYWQMCIFLCMGGNSTTWMNTAV 132


>tr|Q69JG4|Q69JG4_ORYSJ Os09g0536700 protein OS=Oryza sativa subsp.
           japonica GN=P0229B10.1-1 PE=2 SV=1
          Length = 552

 Score =  114 bits (284), Expect = 7e-24
 Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           +W G V+A+W+   SGN Y ++NYS ++K L+G+ Q  LNGLSV++D+G +         
Sbjct: 16  RWLGLVTAVWVQCISGNNYTFSNYSHSIKTLMGLTQLQLNGLSVAKDVGKA-FGLLAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ +P W+LL + +  G LGYG QWLVV+R + PLPYW M + L   G    WMNT V
Sbjct: 75  SDRVPTWLLLAVGSLEGLLGYGAQWLVVSRAVAPLPYWQMCVFLCLGGNSTTWMNTAV 132


>tr|B8BDX1|B8BDX1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32184 PE=4 SV=1
          Length = 549

 Score =  114 bits (284), Expect = 7e-24
 Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           +W G V+A+W+   SGN Y ++NYS ++K L+G+ Q  LNGLSV++D+G +         
Sbjct: 16  RWLGLVTAVWVQCISGNNYTFSNYSHSIKTLMGLTQLQLNGLSVAKDVGKA-FGLLAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ +P W+LL + +  G LGYG QWLVV+R + PLPYW M + L   G    WMNT V
Sbjct: 75  SDRVPTWLLLAVGSLEGLLGYGAQWLVVSRAVAPLPYWQMCVFLCLGGNSTTWMNTAV 132


>tr|B7EKL1|B7EKL1_ORYSJ cDNA clone:J023012O05, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 432

 Score =  114 bits (284), Expect = 7e-24
 Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           +W G V+A+W+   SGN Y ++NYS ++K L+G+ Q  LNGLSV++D+G +         
Sbjct: 16  RWLGLVTAVWVQCISGNNYTFSNYSHSIKTLMGLTQLQLNGLSVAKDVGKA-FGLLAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ +P W+LL + +  G LGYG QWLVV+R + PLPYW M + L   G    WMNT V
Sbjct: 75  SDRVPTWLLLAVGSLEGLLGYGAQWLVVSRAVAPLPYWQMCVFLCLGGNSTTWMNTAV 132


>tr|A3C4M6|A3C4M6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030248 PE=4 SV=1
          Length = 586

 Score =  114 bits (284), Expect = 7e-24
 Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           +W G V+A+W+   SGN Y ++NYS ++K L+G+ Q  LNGLSV++D+G +         
Sbjct: 8   RWLGLVTAVWVQCISGNNYTFSNYSHSIKTLMGLTQLQLNGLSVAKDVGKA-FGLLAGLA 66

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ +P W+LL + +  G LGYG QWLVV+R + PLPYW M + L   G    WMNT V
Sbjct: 67  SDRVPTWLLLAVGSLEGLLGYGAQWLVVSRAVAPLPYWQMCVFLCLGGNSTTWMNTAV 124


>tr|B7FLG8|B7FLG8_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 552

 Score =  112 bits (281), Expect = 1e-23
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   SGN Y ++NYS ALK L+ + Q  LN LSV++D+G +         
Sbjct: 15  KWFGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKA-FGLLAGLA 73

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ LP W +L I +  G +GYG+QWLVV + I PLPYW M + L   G    WMNT V
Sbjct: 74  SDRLPTWAILLIGSFEGLIGYGVQWLVVGQYIQPLPYWQMCVFLCMGGNSTTWMNTAV 131


>tr|Q9SLF1|Q9SLF1_ARATH Nodulin-like protein (At2g16660/T24I21.7)
           OS=Arabidopsis thaliana GN=At2g16660 PE=2 SV=1
          Length = 546

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/118 (48%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   SGN Y ++NYS ALK L+ +NQ  LN LSV++D+G +         
Sbjct: 14  KWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLNQLELNNLSVAKDVGKA-FGILAGLA 72

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ LP  V+L I    G LGYG+QWLVV+R I P+PYW M + L   G    WMNT V
Sbjct: 73  SDRLPTPVILLIGCFEGLLGYGVQWLVVSRTIQPIPYWQMCIFLCMGGNSTTWMNTAV 130


>tr|Q9SW40|Q9SW40_ARATH Putative uncharacterized protein AT4g34950
           OS=Arabidopsis thaliana GN=T11I11.190 PE=2 SV=1
          Length = 567

 Score =  107 bits (267), Expect = 6e-22
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   SGN Y ++NYS ALK L+ + Q  LN LSV++D+G +         
Sbjct: 16  KWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLTQLELNSLSVAKDVGKA-FGILAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ L   V+L I +  G LGYG+QWLVV+R I P+PYW M + L   G    WMNT V
Sbjct: 75  SDRLSTPVILLIGSFEGLLGYGVQWLVVSRTIQPIPYWQMCVFLCMGGNSTTWMNTAV 132


>tr|Q6NKP5|Q6NKP5_ARATH At4g34950 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 411

 Score =  107 bits (267), Expect = 6e-22
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   SGN Y ++NYS ALK L+ + Q  LN LSV++D+G +         
Sbjct: 16  KWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLTQLELNSLSVAKDVGKA-FGILAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ L   V+L I +  G LGYG+QWLVV+R I P+PYW M + L   G    WMNT V
Sbjct: 75  SDRLSTPVILLIGSFEGLLGYGVQWLVVSRTIQPIPYWQMCVFLCMGGNSTTWMNTAV 132


>tr|O49604|O49604_ARATH EF-1 alpha-like protein (Fragment)
           OS=Arabidopsis thaliana GN=M4E13.10 PE=4 SV=1
          Length = 164

 Score =  107 bits (267), Expect = 6e-22
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +3

Query: 282 KWAGFVSAMWLMVFSGN-YAYANYSKALKVLLGINQSHLNGLSVSRDIGDSCXXXXXXXL 458
           KW GFV+A+W+   SGN Y ++NYS ALK L+ + Q  LN LSV++D+G +         
Sbjct: 16  KWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLTQLELNSLSVAKDVGKA-FGILAGLA 74

Query: 459 SNYLPPWVLLCIAATFGFLGYGIQWLVVARVIDPLPYWIMAMSLMAAGICIAWMNTIV 632
           S+ L   V+L I +  G LGYG+QWLVV+R I P+PYW M + L   G    WMNT V
Sbjct: 75  SDRLSTPVILLIGSFEGLLGYGVQWLVVSRTIQPIPYWQMCVFLCMGGNSTTWMNTAV 132