DK949490 |
Clone id |
TST38A01NGRL0006_C02 |
Library |
TST38 |
Length |
723 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_C02. 5' end sequence. |
Accession |
DK949490 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1270Contig1 |
Sequence |
GGAGCTCAACAGCTTTCCCGGACTACCAGCGGCTTCCTGACAAGAGCAATCGCTTTGGCG ACCCAAGCAATGGTGCTGCAATGCGGAAAGCTTCCATAGTTTGGTTCAGAAATGACCTTC GCTGCCATGACAATGAAGCTCTTGCTGCTGCAACCAAGGAGTCCGTATCTGTTCTACCTG TCTACTGCTTTGACCCACGGGATTACGGCAAGTCTTCAGCTGGCTTTGACAAGACGGGCC CTTATAGGGCCAAATTTCTTCTAGAATGTGTCTCTAACCTGAGAGAGAACCTCAGAGAGA GGGGATCAGACCTTGTTGTGAGAGTTGGTAAGCCAGAAGAGGTTTTGGTCACTCTAGCTA AGAGCATTGGGGCGGATGCTTTGTATGCTCACCAGGAGGTGTCCTGTGAAGAAGTGGTTT CAGAGAAGAAGGTGTCTTCTGCATTGCAGGAGCAAGGAGTGGATGTGAAATACTTCTGGG GAAGCACTTTGTTCCATGTTGATGACCTGCCATTTAAGCTTGAGGAAATGCCAATAACAT ACAGTGGGTTCAGAGAGAAGGTTCAAAATGTGAGTGTGAGGCAATCTGAAGAAGCTCCAA AGCGCCTCANAGGGCTTCCTATTCGAGGAGGTGTGAAACCCGGAGACATTCCTAGCGTTC AAGAGCTAGGCTTGAAACCCATGAGTGGACAGCGTCAGGATGGATCTTCTGTTGCCCATT CAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LB72 |
Definition |
sp|Q8LB72|PHR2_ARATH Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana |
Align length |
215 |
Score (bit) |
271.0 |
E-value |
3.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949490|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_C02, 5' (723 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8LB72|PHR2_ARATH Blue-light photoreceptor PHR2 OS=Arabidopsi... 271 3e-72 sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus ... 170 6e-42 sp|Q84KJ5|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondr... 154 6e-37 sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondr... 145 2e-34 sp|Q38JU2|CRYD_SOLLC Cryptochrome DASH, chloroplastic/mitochondr... 144 5e-34 sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (str... 144 6e-34 sp|Q75WS4|CRYD_XENLA Cryptochrome DASH OS=Xenopus laevis GN=cry-... 139 2e-32 sp|Q3IPX9|CRYD_NATPD Cryptochrome DASH OS=Natronomonas pharaonis... 137 8e-32 sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica... 131 3e-30 sp|Q4KML2|CRYD_DANRE Cryptochrome DASH OS=Danio rerio GN=cry-das... 128 3e-29 sp|Q5IFN2|CRYD_OSTTA Cryptochrome DASH, chloroplastic/mitochondr... 99 2e-20 sp|Q5QXE0|CRYD_IDILO Cryptochrome DASH OS=Idiomarina loihiensis ... 80 1e-14 sp|Q49AN0|CRY2_HUMAN Cryptochrome-2 OS=Homo sapiens GN=CRY2 PE=1... 67 8e-11 sp|P05327|PHR_SYNP6 Deoxyribodipyrimidine photo-lyase OS=Synecho... 67 1e-10 sp|Q55081|PHR_SYNY3 Deoxyribodipyrimidine photo-lyase OS=Synecho... 66 2e-10 sp|Q923I8|CRY2_RAT Cryptochrome-2 OS=Rattus norvegicus GN=Cry2 P... 66 2e-10 sp|Q70AD6|CRY1_SPAJD Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=... 65 3e-10 sp|Q9R194|CRY2_MOUSE Cryptochrome-2 OS=Mus musculus GN=Cry2 PE=1... 65 4e-10 sp|Q8QG60|CRY2_CHICK Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=... 65 4e-10 sp|Q8WP19|CRY1_MACFA Cryptochrome-1 OS=Macaca fascicularis GN=CR... 65 5e-10 sp|Q16526|CRY1_HUMAN Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1... 65 5e-10 sp|P97784|CRY1_MOUSE Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1... 64 6e-10 sp|Q5IZC5|CRY1_ERIRU Cryptochrome-1 OS=Erithacus rubecula GN=CRY... 64 6e-10 sp|Q8QG61|CRY1_CHICK Cryptochrome-1 OS=Gallus gallus GN=CRY1 PE=... 64 1e-09 sp|Q6ZZY0|CRY1_SYLBO Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2... 63 1e-09 sp|Q32Q86|CRY1_RAT Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 P... 63 1e-09 sp|Q9HQ46|PHR_HALSA Deoxyribodipyrimidine photo-lyase OS=Halobac... 62 2e-09 sp|Q05380|YAT1_SYNP1 Uncharacterized 31.6 kDa protein in atpI 5'... 61 7e-09 sp|Q96524|CRY2_ARATH Cryptochrome-2 OS=Arabidopsis thaliana GN=C... 61 7e-09 sp|P12768|PHR_STRGR Deoxyribodipyrimidine photo-lyase OS=Strepto... 59 3e-08
>sp|Q8LB72|PHR2_ARATH Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2 Length = 447
Score = 271 bits (692), Expect = 3e-72 Identities = 129/215 (60%), Positives = 165/215 (76%) Frame = +3
Query: 60 DPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTG 239 DPS+ AA+R+A++VWFRNDLR HDNE L +A E VSVLPVYCFDPRDYGKSS+GFDKTG Sbjct: 106 DPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTG 165
Query: 240 PYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXX 419 P+RA+FL+E VS LR+NL+ RGS+LVVRVGKPE VLV LAK IGADA+YAH+ Sbjct: 166 PFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVK 225
Query: 420 XXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAP 599 A++E+GV+VKYFWGSTL+H+DDLPFK+E++P Y F++KVQ + +R++ A Sbjct: 226 AEGKIETAMKEEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAAL 285
Query: 600 KRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDG 704 +L LP RG V+ GDIPS+ +LG+ P Q+G Sbjct: 286 DQLKSLPSRGDVELGDIPSLLDLGISPTPRTSQEG 320
>sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1 Length = 500
Score = 170 bits (431), Expect = 6e-42 Identities = 88/205 (42%), Positives = 130/205 (63%), Gaps = 2/205 (0%) Frame = +3
Query: 87 KASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLE 266 K +VW+RNDLR HD+E L +A ++ V+ +YCFDPR +GK+ GF+KTGP+RA+FLLE Sbjct: 4 KTVLVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLE 63
Query: 267 CVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXAL 446 V++LR +LR+ GSDL+VR G PEEV+ L + A++ H AL Sbjct: 64 SVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQAAL 123
Query: 447 QEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQ-NVSVRQSEEAPKRLXGLPI 623 V V+ FWG+TL H DDLPF +E +P ++ FR++V+ + ++ AP +L LP Sbjct: 124 APLNVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFRKQVERSAAINPPLPAPAKLPPLP- 182
Query: 624 RGGVKPGDIPSVQELGLK-PMSGQR 695 V PG+IP + +LGL+ P++ +R Sbjct: 183 --AVDPGEIPQLADLGLESPVTDER 205
>sp|Q84KJ5|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2 Length = 569
Score = 154 bits (388), Expect = 6e-37 Identities = 88/222 (39%), Positives = 128/222 (57%), Gaps = 7/222 (3%) Frame = +3
Query: 51 RFGDPSNGAAMRKA---SIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSA 221 R+ PS+ + RK +I+WFRNDLR DN+AL A S ++LPVYC DPR + + Sbjct: 69 RYALPSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHF 128
Query: 222 -GFDKTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQX 398 F KTG R FL+EC+ +LR+NL +RG +L++R GKPEE+L +LAK GA ++AH+ Sbjct: 129 FNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKE 188
Query: 399 XXXXXXXXXXXXXXALQEQGVDVK--YFWGSTLFHVDDLPFKLEEMPITYSGFREKVQ-N 569 L+ G K WGST++H DDLPF + ++P Y+ FR+ V+ Sbjct: 189 TCSEEVDVERLVNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAK 248
Query: 570 VSVRQSEEAPKRLXGLPIRGGVKPGDIPSVQELGLKPMSGQR 695 S+R S P L P GD+P++++LG++P R Sbjct: 249 CSIRSSTRIPLSLGPTPSVDDW--GDVPTLEKLGVEPQEVTR 288
>sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1 Length = 582
Score = 145 bits (367), Expect = 2e-34 Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 21/222 (9%) Frame = +3
Query: 93 SIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSA--GFDKTGPYRAKFLLE 266 +IVWFRNDLR DNEA+ A S +VLPVYC DPR S+ GF KTG RA+FL+E Sbjct: 86 AIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIE 145
Query: 267 CVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXAL 446 C+ +L+ NL ++G DL++R GKPE++L ++AK++ A +YAH+ L Sbjct: 146 CLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHLVRKGL 205
Query: 447 QE--------------QGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQN-VSVR 581 ++ + ++ WG+TL+HVDDLPF + +P Y+ FR+ V++ SVR Sbjct: 206 EQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQFRKAVESKSSVR 265
Query: 582 QSEEAPKRLXGLPIRGGVKP----GDIPSVQELGLKPMSGQR 695 + P L G P G+ G +P+++ LGL ++ Sbjct: 266 NCSKLPPSL-GPPPGSGLDEIGGWGTVPTLESLGLSMTKAEK 306
>sp|Q38JU2|CRYD_SOLLC Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2 Length = 577
Score = 144 bits (363), Expect = 5e-34 Identities = 87/225 (38%), Positives = 123/225 (54%), Gaps = 21/225 (9%) Frame = +3
Query: 66 SNGAAMRKA---SIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSA-GFDK 233 S G RK +IVWFRNDLR DNEAL A S ++LPVYC DPR +G + G K Sbjct: 68 SGGLGKRKGKGVAIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPK 127
Query: 234 TGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXX 413 TG RA+F++EC+++L+ NL +RG DL+++ GKPE+++ +LAK+ A +YAH+ Sbjct: 128 TGALRAQFIIECLNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEE 187
Query: 414 XXXXXXXXXALQE----------------QGVDVKYFWGSTLFHVDDLPFKLEEMPITYS 545 LQ+ ++ WGST++H+DDLPF E +P Y+ Sbjct: 188 VKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYT 247
Query: 546 GFREKVQNVS-VRQSEEAPKRLXGLPIRGGVKPGDIPSVQELGLK 677 FR+ V+ S VR + P P G G +P V ELGL+ Sbjct: 248 QFRKSVEYKSKVRNCTKLPTSFGPPPEVGDW--GHVPQVSELGLQ 290
>sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2 Length = 489
Score = 144 bits (362), Expect = 6e-34 Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 2/177 (1%) Frame = +3
Query: 96 IVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECVS 275 +VWFRNDLR HD+E L A K +++ VYC+DPR + ++ GF KTGP+R+ FL + V Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQ 68
Query: 276 NLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQEQ 455 NL E+L++ G+ L+V G PE+V+ +AK I A +Y H+ L Sbjct: 69 NLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTIL 128
Query: 456 GVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQ--NVSVRQSEEAPKRLXGLP 620 G++ K +WGSTL H +DLPF ++++P ++ FR+ ++ +S+R AP +L P Sbjct: 129 GIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSP 185
>sp|Q75WS4|CRYD_XENLA Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1 Length = 523
Score = 139 bits (350), Expect = 2e-32 Identities = 79/194 (40%), Positives = 114/194 (58%), Gaps = 4/194 (2%) Frame = +3
Query: 96 IVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDY-GKSSAGFDKTGPYRAKFLLECV 272 I RNDLR HDNE L A + + ++P+YCFDPR Y G F KTGP+R KFLLE V Sbjct: 9 ICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESV 68
Query: 273 SNLRENLRERGSDLVVRVGKPEEVLVTLAKSIG-ADALYAHQXXXXXXXXXXXXXXXALQ 449 +LR L+++GS+L++R GKPEEV+ L K +G A+ H+ A Sbjct: 69 RDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQACT 128
Query: 450 EQGVDVKYFWGSTLFHVDDLPFK-LEEMPITYSGFREKVQNV-SVRQSEEAPKRLXGLPI 623 G+ + FWGSTL+H +DLPF+ + +P Y+ FR+ V+ VR + + P +L LP Sbjct: 129 RLGIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRKAVETQGKVRPTFQMPDKLKPLP- 187
Query: 624 RGGVKPGDIPSVQE 665 G++ G +PS ++ Sbjct: 188 -SGLEEGSVPSHED 200
>sp|Q3IPX9|CRYD_NATPD Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1 Length = 474
Score = 137 bits (344), Expect = 8e-32 Identities = 75/195 (38%), Positives = 114/195 (58%), Gaps = 1/195 (0%) Frame = +3
Query: 93 SIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECV 272 ++VWFR+DLR DN LA A + +V+PVY FDP Y +S G KTG +RA F + V Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQAV 63
Query: 273 SNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQE 452 ++LR +LR+RG DL+VR G+P V+ LA+ GADA+YA AL + Sbjct: 64 ADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEERRRAADVASALDD 123
Query: 453 QGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQ-NVSVRQSEEAPKRLXGLPIRG 629 G+ ++ W TL+H DDLP ++ T++ +R++ + +VR AP+ +P Sbjct: 124 AGIALRQRWTHTLYHPDDLPTPPTDIDDTFTPWRKETEAAATVRDPRSAPET---VPTPD 180
Query: 630 GVKPGDIPSVQELGL 674 G+ PG +P+V+ LG+ Sbjct: 181 GLTPGPVPTVESLGV 195
>sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2 Length = 488
Score = 131 bits (330), Expect = 3e-30 Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 1/195 (0%) Frame = +3
Query: 93 SIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECV 272 ++VWFRNDLR D+E A+ V+C DPR + + GF +TGP+RA+FL+E + Sbjct: 4 ALVWFRNDLRTIDHEPFLRASTAD-RCFAVHCIDPRQFETTELGFQRTGPFRARFLIENL 62
Query: 273 SNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQE 452 ++LR LR G +L+VRVG+PE VL L S+ DA++ H + Sbjct: 63 TDLRSRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEEADTAESVQQLCDQ 122
Query: 453 QGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQ-NVSVRQSEEAPKRLXGLPIRG 629 G+ +G TL H D+LPF++ + P ++ FR++++ R E P R+ G + Sbjct: 123 HGIATHVAYGDTLIHPDELPFEIADTPELFTDFRKEIEKQCEARSPLEEPIRIHG-TLPE 181
Query: 630 GVKPGDIPSVQELGL 674 V GDIP+++ LGL Sbjct: 182 EVNAGDIPTLESLGL 196
>sp|Q4KML2|CRYD_DANRE Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2 Length = 520
Score = 128 bits (322), Expect = 3e-29 Identities = 77/196 (39%), Positives = 109/196 (55%), Gaps = 4/196 (2%) Frame = +3
Query: 96 IVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDY-GKSSAGFDKTGPYRAKFLLECV 272 I RNDLR HDNE A + + ++P+YCFDPR Y G F KTGP+R +FLL+ V Sbjct: 8 ICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSV 67
Query: 273 SNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYA-HQXXXXXXXXXXXXXXXALQ 449 +LR L++ GS L+VR GKPE+V+ L K +G+ + A H+ Sbjct: 68 KDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKEICC 127
Query: 450 EQGVDVKYFWGSTLFHVDDLPFK-LEEMPITYSGFREKVQ-NVSVRQSEEAPKRLXGLPI 623 + V V+ FWGSTL+H DDLPF + +P Y+ FR+ V+ VR P+++ P Sbjct: 128 QNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLSTPEQVKSPP- 186
Query: 624 RGGVKPGDIPSVQELG 671 G++ G IP+ LG Sbjct: 187 -SGLEEGPIPTFDSLG 201
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NVB3 |
Definition |
tr|A9NVB3|A9NVB3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
238 |
Score (bit) |
318.0 |
E-value |
2.0e-85 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949490|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_C02, 5' (723 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NVB3|A9NVB3_PICSI Putative uncharacterized protein OS=Picea... 318 2e-85 tr|A9S2A4|A9S2A4_PHYPA Predicted protein OS=Physcomitrella paten... 311 2e-83 tr|A7Q0E4|A7Q0E4_VITVI Chromosome chr7 scaffold_42, whole genome... 283 1e-74 tr|A9PD20|A9PD20_POPTR Putative uncharacterized protein OS=Popul... 282 2e-74 tr|Q058P5|Q058P5_ARATH At2g47590 OS=Arabidopsis thaliana PE=2 SV=1 271 4e-71 tr|A9TL17|A9TL17_PHYPA PHR2b AtPHR2-like CDP DNA photolyase OS=P... 270 7e-71 tr|A5BKC1|A5BKC1_VITVI Putative uncharacterized protein (Fragmen... 259 2e-67 tr|Q1W7G5|Q1W7G5_9SOLA DNA photolyase protein (Fragment) OS=Phys... 255 2e-66 tr|Q1W7F9|Q1W7F9_SOLTU DNA photolyase protein (Fragment) OS=Sola... 255 2e-66 tr|Q1W7G4|Q1W7G4_SOLLC DNA photolyase protein (Fragment) OS=Sola... 254 5e-66 tr|Q1W7G3|Q1W7G3_SOLME DNA photolyase protein (Fragment) OS=Sola... 253 1e-65 tr|Q1W7G0|Q1W7G0_CAPAN DNA photolyase protein (Fragment) OS=Caps... 252 2e-65 tr|Q1W7F8|Q1W7F8_COFCA DNA photolyase protein (Fragment) OS=Coff... 249 1e-64 tr|Q1W7G2|Q1W7G2_PETPA DNA photolyase protein (Fragment) OS=Petu... 234 4e-60 tr|Q1W7G1|Q1W7G1_NICTO DNA photolyase protein (Fragment) OS=Nico... 233 7e-60 tr|B4FBD9|B4FBD9_MAIZE Putative uncharacterized protein OS=Zea m... 232 2e-59 tr|B6U742|B6U742_MAIZE Photolyase/blue-light receptor PHR2 OS=Ze... 231 4e-59 tr|Q1W7F4|Q1W7F4_SOLHA DNA photolyase protein (Fragment) OS=Sola... 228 2e-58 tr|Q1W7F0|Q1W7F0_SOLPN DNA photolyase protein (Fragment) OS=Sola... 228 2e-58 tr|Q1W7E9|Q1W7E9_9SOLN DNA photolyase protein (Fragment) OS=Sola... 227 7e-58 tr|Q10LM1|Q10LM1_ORYSJ Os03g0343400 protein OS=Oryza sativa subs... 226 1e-57 tr|A2XGK1|A2XGK1_ORYSI Putative uncharacterized protein OS=Oryza... 226 1e-57 tr|Q1W7F7|Q1W7F7_9SOLN DNA photolyase protein (Fragment) OS=Sola... 226 2e-57 tr|Q1W7F3|Q1W7F3_SOLCI DNA photolyase protein (Fragment) OS=Sola... 225 3e-57 tr|A8IVN7|A8IVN7_CHLRE CPH-like protein (Fragment) OS=Chlamydomo... 216 9e-55 tr|Q1W7F2|Q1W7F2_SOLPE DNA photolyase protein (Fragment) OS=Sola... 201 4e-50 tr|Q1W7F6|Q1W7F6_SOLPI DNA photolyase protein (Fragment) OS=Sola... 196 1e-48 tr|Q1W7F5|Q1W7F5_9SOLN DNA photolyase protein (Fragment) OS=Sola... 193 1e-47 tr|B5W072|B5W072_SPIMA Cryptochrome, DASH family OS=Arthrospira ... 172 2e-41 tr|A0YNC9|A0YNC9_9CYAN Probable bacterial cryptochrome OS=Lyngby... 170 1e-40
>tr|A9NVB3|A9NVB3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 526
Score = 318 bits (815), Expect = 2e-85 Identities = 154/238 (64%), Positives = 187/238 (78%) Frame = +3
Query: 9 TAFPDYQRLPDKSNRFGDPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYC 188 +AFPDY RL GDPSN AA+RKA+IVWFRNDLR HDNEAL++A KE++SVLPVYC Sbjct: 162 SAFPDYHRLRQSGRDAGDPSNAAALRKAAIVWFRNDLRVHDNEALSSANKEALSVLPVYC 221
Query: 189 FDPRDYGKSSAGFDKTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSI 368 FDPRDYGKSS+GFDKTGP+RA FLLECV+NLR NLRERGSDLVVR+G+PEEVLV LAKSI Sbjct: 222 FDPRDYGKSSSGFDKTGPFRATFLLECVANLRANLRERGSDLVVRIGRPEEVLVELAKSI 281
Query: 369 GADALYAHQXXXXXXXXXXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSG 548 GADALYAHQ +L+E+GV+ K+FWGSTL+H +DLPFKL++MP Y G Sbjct: 282 GADALYAHQEVSHEEIATEEKIKSSLEEEGVETKFFWGSTLYHPEDLPFKLQDMPSNYGG 341
Query: 549 FREKVQNVSVRQSEEAPKRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDGSSVAHS 722 FRE+VQ +SVRQ + P++L GLP RG V+PG +PS+ +LGL P G QDG + ++ Sbjct: 342 FRERVQRLSVRQIIKDPEQLKGLPTRGDVEPGKVPSLLDLGLNPNFG--QDGKTAVNA 397
>tr|A9S2A4|A9S2A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHR2a PE=4 SV=1 Length = 528
Score = 311 bits (798), Expect = 2e-83 Identities = 147/235 (62%), Positives = 184/235 (78%) Frame = +3
Query: 9 TAFPDYQRLPDKSNRFGDPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYC 188 +AFP+Y++L + F DP+NG +R+ASIVWFRNDLR HDNEAL +A ++S+S+LPVYC Sbjct: 154 SAFPEYEKL--RGPDFKDPANGCGLRRASIVWFRNDLRVHDNEALVSANRDSLSILPVYC 211
Query: 189 FDPRDYGKSSAGFDKTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSI 368 FDP+DYGKSS+GFDKTGPYRA FLLECV+NLR +LRERGSDL+VRVG PE VLV LAKS+ Sbjct: 212 FDPKDYGKSSSGFDKTGPYRANFLLECVANLRSSLRERGSDLIVRVGSPEAVLVDLAKSV 271
Query: 369 GADALYAHQXXXXXXXXXXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSG 548 GA+ALY HQ ALQE+G++ KYFWGSTLFH++DLPFKL++MP Y G Sbjct: 272 GAEALYVHQEVTYEELQAEEKVAAALQEKGIETKYFWGSTLFHLEDLPFKLQDMPSNYGG 331
Query: 549 FREKVQNVSVRQSEEAPKRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDGSSV 713 FREKVQNV++R + EAP++L GLP G VKPG IPS++ LGL P + R+ +V Sbjct: 332 FREKVQNVAIRDTIEAPQQLKGLPACGNVKPGSIPSIEVLGLNPATNLRKGSVTV 386
>tr|A7Q0E4|A7Q0E4_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028018001 PE=4 SV=1 Length = 454
Score = 283 bits (723), Expect = 1e-74 Identities = 133/223 (59%), Positives = 173/223 (77%) Frame = +3
Query: 51 RFGDPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFD 230 R DPSN A +R++ IVWFRNDLR HDNE L +A+ ES+S+LPVYCFDPRDYGKSS+GFD Sbjct: 106 RSSDPSNAAGIRRSCIVWFRNDLRVHDNECLNSASNESMSMLPVYCFDPRDYGKSSSGFD 165
Query: 231 KTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXX 410 KTGPYRA FL+E VS+LR+NL++RGSDLVVR+GKPE VLV LAK++GADA+YAH+ Sbjct: 166 KTGPYRASFLIESVSDLRQNLQKRGSDLVVRIGKPETVLVELAKAVGADAIYAHREVSHD 225
Query: 411 XXXXXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSE 590 A++E+GV++KYFWGSTL+HVDDLPFK+E+MP Y GF+EKV+ + +R++ Sbjct: 226 EVKGEEKIEAAMKEEGVELKYFWGSTLYHVDDLPFKMEQMPTNYGGFKEKVKGLEIRKTI 285
Query: 591 EAPKRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDGSSVAH 719 +L GLP RG V+ G+IPS+ +LGL P + Q+G S A+ Sbjct: 286 ATLDQLRGLPARGDVEAGEIPSLLDLGLSPSATLPQNGMSTAN 328
>tr|A9PD20|A9PD20_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 457
Score = 282 bits (721), Expect = 2e-74 Identities = 137/224 (61%), Positives = 171/224 (76%) Frame = +3
Query: 51 RFGDPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFD 230 R DPSN A R+A IVWFRNDLR HDNE L +A +S+SVLPVYCFDPRDYGKSS+GFD Sbjct: 112 RPSDPSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYGKSSSGFD 171
Query: 231 KTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXX 410 KTGPYRA FL+E VS+LR+NL+ RGSDLVVRVG+PE VLV LAK+IGADA+YAH+ Sbjct: 172 KTGPYRANFLIESVSDLRKNLQARGSDLVVRVGRPETVLVELAKAIGADAVYAHREVSHD 231
Query: 411 XXXXXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSE 590 ++++GV+VKYFWGSTL+H+DDLPFKLE+MP Y GF+EKVQ + +R++ Sbjct: 232 EVKAEEKIEELMKDEGVEVKYFWGSTLYHLDDLPFKLEDMPSNYGGFKEKVQGLEIRKTI 291
Query: 591 EAPKRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDGSSVAHS 722 E +L GLP RG V+PGDIP++ +LGL P QDG + A++ Sbjct: 292 ETLDQLKGLPSRGDVEPGDIPNLLDLGLNP----AQDGKAAANA 331
>tr|Q058P5|Q058P5_ARATH At2g47590 OS=Arabidopsis thaliana PE=2 SV=1 Length = 447
Score = 271 bits (692), Expect = 4e-71 Identities = 129/215 (60%), Positives = 165/215 (76%) Frame = +3
Query: 60 DPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTG 239 DPS+ AA+R+A++VWFRNDLR HDNE L +A E VSVLPVYCFDPRDYGKSS+GFDKTG Sbjct: 106 DPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTG 165
Query: 240 PYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXX 419 P+RA+FL+E VS LR+NL+ RGS+LVVRVGKPE VLV LAK IGADA+YAH+ Sbjct: 166 PFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVK 225
Query: 420 XXXXXXXALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAP 599 A++E+GV+VKYFWGSTL+H+DDLPFK+E++P Y F++KVQ + +R++ A Sbjct: 226 AEGKIETAMKEEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAAL 285
Query: 600 KRLXGLPIRGGVKPGDIPSVQELGLKPMSGQRQDG 704 +L LP RG V+ GDIPS+ +LG+ P Q+G Sbjct: 286 DQLKSLPSRGDVELGDIPSLLDLGISPTPRTSQEG 320
>tr|A9TL17|A9TL17_PHYPA PHR2b AtPHR2-like CDP DNA photolyase OS=Physcomitrella patens subsp. patens GN=PHR2b PE=4 SV=1 Length = 435
Score = 270 bits (690), Expect = 7e-71 Identities = 136/267 (50%), Positives = 174/267 (65%), Gaps = 36/267 (13%) Frame = +3
Query: 9 TAFPDYQRLPDKSNRFGDPSNGAAMRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYC 188 +AFP+YQ L + F +PS+ A +R+ASIVWFRNDLR HDNEAL +A+++S+S+LPVYC Sbjct: 30 SAFPEYQSL--RGPEFKNPSSAAGLRRASIVWFRNDLRLHDNEALVSASRDSLSILPVYC 87
Query: 189 FDPRDYGKSSAGFDKTGPYRAKFLLECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSI 368 FDPRDYG SS G DK GPYR KFL ECV+NLR +LRERGSDL+VR+GKPEEVL+ LAKS+ Sbjct: 88 FDPRDYGNSSLGIDKNGPYRVKFLFECVANLRSSLRERGSDLIVRIGKPEEVLLDLAKSV 147
Query: 369 GADALYAHQ------------------------------------XXXXXXXXXXXXXXX 440 GA++LYAHQ Sbjct: 148 GAESLYAHQEVAYGELQEGDFVAISSNSYTPWLSHKGVAVKRSWNALNRGPFQAQEKVAA 207
Query: 441 ALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAPKRLXGLP 620 A Q+ GV+ K+FWG TL H++DLPF+L++MP Y GFRE VQN++VR + EA + L GLP Sbjct: 208 AFQDNGVETKFFWGGTLVHLEDLPFELDDMPSNYGGFREMVQNLAVRSTIEALQELKGLP 267
Query: 621 IRGGVKPGDIPSVQELGLKPMSGQRQD 701 G ++PG IP +QELGL P + RQ+ Sbjct: 268 ACGNIEPGRIPFLQELGLNPAADMRQE 294
>tr|A5BKC1|A5BKC1_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_003623 PE=4 SV=1 Length = 212
Score = 259 bits (661), Expect = 2e-67 Identities = 120/197 (60%), Positives = 156/197 (79%) Frame = +3
Query: 81 MRKASIVWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFL 260 +R++ VWFRNDLR HDNE L +A+ ES+S+LPVYCFDPRDYGKSS+GFDKTGPYRA FL Sbjct: 1 IRRSCXVWFRNDLRVHDNECLNSASNESMSMLPVYCFDPRDYGKSSSGFDKTGPYRASFL 60
Query: 261 LECVSNLRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXX 440 +E VS+LR+NL++RGSDLVVR+GKPE VLV LAK++GADA+YAH+ Sbjct: 61 IESVSDLRQNLQKRGSDLVVRIGKPETVLVELAKAVGADAIYAHREVSHDEVKGEEKIEA 120
Query: 441 ALQEQGVDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAPKRLXGLP 620 A++E+GV+ KYFWGSTL+HVDDLPFK+E+MP Y GF+EKV+ + +R++ +L GLP Sbjct: 121 AMKEEGVEXKYFWGSTLYHVDDLPFKMEQMPTNYGGFKEKVKGLEIRKTIATLDQLRGLP 180
Query: 621 IRGGVKPGDIPSVQELG 671 RG V+ G+IPS+ +LG Sbjct: 181 ARGDVEAGEIPSLLDLG 197
>tr|Q1W7G5|Q1W7G5_9SOLA DNA photolyase protein (Fragment) OS=Physalis sp. TA1367 GN=At2g47590 PE=4 SV=2 Length = 190
Score = 255 bits (651), Expect = 2e-66 Identities = 120/190 (63%), Positives = 151/190 (79%) Frame = +3
Query: 99 VWFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECVSN 278 VWFRNDLR HDNE L AA ES+SVLPVYCFDPRDYGKSS+GFDKTGPYRA FL+E V++ Sbjct: 1 VWFRNDLRVHDNECLNAAHNESMSVLPVYCFDPRDYGKSSSGFDKTGPYRATFLIESVAD 60
Query: 279 LRENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQEQG 458 L++NL+ RGSDLVVR+GKPE VLV LAK++GA+A+YAH+ ++++G Sbjct: 61 LKKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSYDEVKGEEKIEGVMKDEG 120
Query: 459 VDVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAPKRLXGLPIRGGVK 638 VDVK+FWGSTL+HVDDLPFKLE MP Y GFREKV+ + +R++ EA ++ GLP RG V+ Sbjct: 121 VDVKFFWGSTLYHVDDLPFKLEGMPTNYGGFREKVKGLEIRKTIEALDQMRGLPARGDVE 180
Query: 639 PGDIPSVQEL 668 PG+IPS+ +L Sbjct: 181 PGEIPSLVDL 190
>tr|Q1W7F9|Q1W7F9_SOLTU DNA photolyase protein (Fragment) OS=Solanum tuberosum GN=At2g47590 PE=4 SV=2 Length = 189
Score = 255 bits (651), Expect = 2e-66 Identities = 121/189 (64%), Positives = 150/189 (79%) Frame = +3
Query: 102 WFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECVSNL 281 WFRNDLR HDNE L AA ES+SVL VYCFDPRDYGKSS+GFDKTGPYRA FL+E V++L Sbjct: 1 WFRNDLRVHDNECLNAAHNESMSVLAVYCFDPRDYGKSSSGFDKTGPYRASFLIESVADL 60
Query: 282 RENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQEQGV 461 R+NL+ RGSDLVVR+GKPE VLV LAK++GA+A+YAH+ ++++G+ Sbjct: 61 RKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSHDEVKGEDKIDAVMKDEGL 120
Query: 462 DVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAPKRLXGLPIRGGVKP 641 +VKYFWGSTL+HVDDLPFKLE+MP Y GFREKVQ + VR++ EA +L GLP RG V+P Sbjct: 121 EVKYFWGSTLYHVDDLPFKLEQMPTNYGGFREKVQGLEVRKTIEALDQLKGLPARGDVEP 180
Query: 642 GDIPSVQEL 668 G+IPS+ +L Sbjct: 181 GEIPSLVDL 189
>tr|Q1W7G4|Q1W7G4_SOLLC DNA photolyase protein (Fragment) OS=Solanum lycopersicum GN=At2g47590 PE=4 SV=2 Length = 189
Score = 254 bits (648), Expect = 5e-66 Identities = 120/189 (63%), Positives = 150/189 (79%) Frame = +3
Query: 102 WFRNDLRCHDNEALAAATKESVSVLPVYCFDPRDYGKSSAGFDKTGPYRAKFLLECVSNL 281 WFRNDLR HDNE L AA ES+SVL VYCFDPRDYGKSS+GFDKTGPYRA FL++ V++L Sbjct: 1 WFRNDLRVHDNECLNAAHNESMSVLAVYCFDPRDYGKSSSGFDKTGPYRASFLIDSVADL 60
Query: 282 RENLRERGSDLVVRVGKPEEVLVTLAKSIGADALYAHQXXXXXXXXXXXXXXXALQEQGV 461 R+NL+ RGSDLVVR+GKPE VLV LAK++GA+A+YAH+ ++++G+ Sbjct: 61 RKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSHDEVKGEDKIDAVMKDEGL 120
Query: 462 DVKYFWGSTLFHVDDLPFKLEEMPITYSGFREKVQNVSVRQSEEAPKRLXGLPIRGGVKP 641 +VKYFWGSTL+HVDDLPFKLE+MP Y GFREKVQ + VR++ EA +L GLP RG V+P Sbjct: 121 EVKYFWGSTLYHVDDLPFKLEQMPTNYGGFREKVQGLEVRKTIEALDQLRGLPARGDVEP 180
Query: 642 GDIPSVQEL 668 G+IPS+ +L Sbjct: 181 GEIPSLVDL 189
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