| DK949503 |
| Clone id |
TST38A01NGRL0006_C15 |
| Library |
TST38 |
| Length |
628 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_C15. 5' end sequence. |
| Accession |
DK949503 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL477Contig1 |
| Sequence |
GGAGTTGAAGGTGAAGCTTAAGTCTTCAGATGACGAGATGTTCGAGGTGGAGGAGATAGT
AGCCTTCGAGTCGCAGACCATCAAGGACATGGTTGAAGACACAGGTACTGACTCCGTTAT
CCCTCTCCTCAACGTTTCCTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCCGTTATCA
TGCCCTCGAGGTTCCTAAGGGCGGTGATGACAAGCCAGCCCTCACCGACGAGGATGTCAA
GCACTGGGATGCTGAGTTTCTCAAAGTTGACCAGGCCACGCTCTTTGATCTTATTCTGGC
TGCCAACTATCTTAACATTCAGAGCTTACTGGATTTGACATGCCAGTGTGTGGCAGATAT
GATTATTTTTCTAACTCCCGAGGAGATCAGGAAAACATTTAATATAAAGAAGGACTTCAC
TCCTGAAGAGGAAGAAGAGGTCAGGAGGGAGAATCAATGGGCCTTTGAGTGATCCTGACA
AGACAGGAATTGAAGGGCAGTTTGTGTAGCAGTCAAAGCTTGTGGGATAAAATTCACTGT
CCAATAAGCTATTTTGAAAACAGGTAGTTTTTGGGACCGTCACAACTGCCATCTTTTGAA
GTCCTATATGGTTGTTTATCTTTCAGTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9FHW7 |
| Definition |
sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana |
| Align length |
162 |
| Score (bit) |
185.0 |
| E-value |
1.0e-46 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949503|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_C15, 5'
(611 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thalia... 185 1e-46
sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thalia... 181 3e-45
sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a... 150 4e-36
sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b... 149 8e-36
sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xeno... 147 4e-35
sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus... 147 4e-35
sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pong... 147 4e-35
sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus ... 147 4e-35
sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Maca... 147 4e-35
sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo... 147 4e-35
sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gall... 147 4e-35
sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavi... 147 4e-35
sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos ... 147 4e-35
sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schi... 132 1e-30
sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Sacc... 109 1e-23
sp|Q03071|ELOC_YEAST Elongin-C OS=Saccharomyces cerevisiae GN=EL... 39 0.021
sp|Q6G4W4|Y218_BARHE UPF0090 protein BH02180 OS=Bartonella hense... 34 0.52
sp|A2RUW0|CA175_RAT Uncharacterized protein C1orf175 homolog OS=... 34 0.67
sp|P70539|ACV1C_RAT Activin receptor type-1C OS=Rattus norvegicu... 32 2.6
sp|Q6G0N9|Y206_BARQU UPF0090 protein BQ02060 OS=Bartonella quint... 32 3.3
sp|Q8K348|ACV1C_MOUSE Activin receptor type-1C OS=Mus musculus G... 32 3.3
sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizos... 30 7.5
sp|Q4IBS9|BRO1_GIBZE Vacuolar protein-sorting protein BRO1 OS=Gi... 30 7.5
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana
GN=SKP1B PE=1 SV=1
Length = 171
Score = 185 bits (470), Expect = 1e-46
Identities = 103/162 (63%), Positives = 114/162 (70%), Gaps = 12/162 (7%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYH--ALEV 176
KSSD E FE++E VA ESQTIK M+ED TD+ IPL NV+SKILSKVIEYC+ H A E
Sbjct: 10 KSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEK 69
Query: 177 PKGGDDKPALT----------DEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTC 326
+ D A T DED+K WD+EF+KVDQ TLFDLILAANYLNI+ LLDLTC
Sbjct: 70 SETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTC 129
Query: 327 QCVADMIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
Q VADMI TPEEIRKTFNIK DFTP NQWAFE
Sbjct: 130 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana
GN=SKP1A PE=1 SV=1
Length = 160
Score = 181 bits (459), Expect = 3e-45
Identities = 95/152 (62%), Positives = 111/152 (73%), Gaps = 2/152 (1%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E FEVEE VA ESQTI MVED D+ +PL NV+SKIL+KVIEYC+ H
Sbjct: 9 KSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS 68
Query: 183 GGD--DKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFL 356
+ + A +D+D+K WDA+F+K+DQATLF+LILAANYLNI++LLDLTCQ VADMI
Sbjct: 69 KAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGK 128
Query: 357 TPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
TPEEIR TFNIK DFTP NQWAFE
Sbjct: 129 TPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a
OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 150 bits (380), Expect = 4e-36
Identities = 80/149 (53%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTG-TDSVIPLLNVSSKILSKVIEYCRYHALEV- 176
+SSD+++FE+E+ +A S TIK+M+ED G +DS IPL NV+S IL KV++YCR+H
Sbjct: 7 ESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPS 66
Query: 177 PKGGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFL 356
P+G D K +D+ +D +F KVDQ TLF+LILAANYL+I+ LLD+TC+ VA+MI
Sbjct: 67 PQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGK 126
Query: 357 TPEEIRKTFNIKKDFTPXXXXXXXXXNQW 443
TPEEIRK FNIK DFTP N+W
Sbjct: 127 TPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b
OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 149 bits (377), Expect = 8e-36
Identities = 79/149 (53%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTG-TDSVIPLLNVSSKILSKVIEYCRYHALEV- 176
+SSD+++FE+E+ +A S TIK+M+ED G +D+ IPL NV+S IL KV++YCR+H
Sbjct: 7 ESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPS 66
Query: 177 PKGGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFL 356
P+G D K +D+ +D +F KVDQ TLF+LILAANYL+I+ LLD+TC+ VA+MI
Sbjct: 67 PQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGK 126
Query: 357 TPEEIRKTFNIKKDFTPXXXXXXXXXNQW 443
TPEEIRK FNIK DFTP N+W
Sbjct: 127 TPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus
laevis GN=skp1 PE=1 SV=3
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus
norvegicus GN=Skp1 PE=2 SV=3
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo
abelii GN=SKP1 PE=2 SV=1
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus
musculus GN=Skp1 PE=1 SV=3
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca
fascicularis GN=SKP1 PE=2 SV=1
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo
sapiens GN=SKP1 PE=1 SV=2
Length = 163
Score = 147 bits (371), Expect = 4e-35
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSV-----IPLLNVSSKILSKVIEYCRYHA 167
+SSD E+FEV+ +A +S TIK M+ED G D +PL NV++ IL KVI++C +H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 168 LEVPKGGDD--KPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVAD 341
+ P DD K TD D+ WD EFLKVDQ TLF+LILAANYL+I+ LLD+TC+ VA+
Sbjct: 67 DDPPPPEDDENKEKRTD-DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 125
Query: 342 MIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
MI TPEEIRKTFNIK DFT NQW E
Sbjct: 126 MIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9NL63 |
| Definition |
tr|A9NL63|A9NL63_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
150 |
| Score (bit) |
212.0 |
| E-value |
1.0e-53 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949503|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_C15, 5'
(611 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9NL63|A9NL63_PICSI Putative uncharacterized protein OS=Picea... 212 1e-53
tr|A9NX34|A9NX34_PICSI Putative uncharacterized protein OS=Picea... 212 2e-53
tr|A9RG78|A9RG78_PHYPA Predicted protein OS=Physcomitrella paten... 211 3e-53
tr|Q3ZDI8|Q3ZDI8_PICAB SCF ubiquitin ligase OS=Picea abies GN=SC... 201 2e-50
tr|A8IJ79|A8IJ79_CHLRE E3 ubiquitin ligase OS=Chlamydomonas rein... 201 3e-50
tr|A9PDK8|A9PDK8_POPTR Putative uncharacterized protein OS=Popul... 199 8e-50
tr|A9PGQ1|A9PGQ1_POPTR Putative uncharacterized protein OS=Popul... 193 8e-48
tr|A5BBC4|A5BBC4_VITVI Putative uncharacterized protein (Chromos... 189 1e-46
tr|A7KZP6|A7KZP6_HUMLU SKP1 component-like 1 OS=Humulus lupulus ... 188 2e-46
tr|Q7XYF8|Q7XYF8_WHEAT SKP1/ASK1-like protein OS=Triticum aestiv... 188 2e-46
tr|A9PJL6|A9PJL6_POPJC Putative uncharacterized protein OS=Popul... 188 2e-46
tr|O48569|O48569_ANTMA Fimbriata-associated protein (Fragment) O... 187 4e-46
tr|B6CNU9|B6CNU9_PETHY SKP1-like protein 4 OS=Petunia hybrida GN... 187 4e-46
tr|A9P8M0|A9P8M0_POPTR Putative uncharacterized protein OS=Popul... 187 4e-46
tr|A0ELU5|A0ELU5_PETIN Skp1-like protein 1 OS=Petunia integrifol... 187 4e-46
tr|Q9M3X1|Q9M3X1_HORVU Putative kinetochore protein OS=Hordeum v... 187 5e-46
tr|Q70JS0|Q70JS0_WHEAT Putative SKP1 protein OS=Triticum aestivu... 186 7e-46
tr|Q6PL11|Q6PL11_ORYSJ Skp1 protein (Putative uncharacterized pr... 186 7e-46
tr|B3TLY6|B3TLY6_ELAGV Kinetochore protein OS=Elaeis guineensis ... 186 7e-46
tr|A2ZDZ0|A2ZDZ0_ORYSI Putative uncharacterized protein OS=Oryza... 186 7e-46
tr|Q9XF99|Q9XF99_MEDSA Skp1 (Fragment) OS=Medicago sativa GN=SKP... 186 1e-45
tr|Q2R4Y1|Q2R4Y1_ORYSJ SKP1-like protein 1B, putative, expressed... 186 1e-45
tr|B3TLM5|B3TLM5_ELAGV Kinetochore protein OS=Elaeis guineensis ... 186 1e-45
tr|Q155U3|Q155U3_MEDTR Putative uncharacterized protein OS=Medic... 185 2e-45
tr|Q0WSZ3|Q0WSZ3_ARATH UIP2 OS=Arabidopsis thaliana GN=At5g42190... 185 2e-45
tr|B7FMV7|B7FMV7_MEDTR Putative uncharacterized protein OS=Medic... 185 2e-45
tr|B4FST4|B4FST4_MAIZE Putative uncharacterized protein OS=Zea m... 185 2e-45
tr|B3TLS0|B3TLS0_ELAGV SKP1 OS=Elaeis guineensis var. tenera PE=... 185 2e-45
tr|B6T1N1|B6T1N1_MAIZE SKP1-like protein 1A OS=Zea mays PE=2 SV=1 184 3e-45
tr|A5C7K8|A5C7K8_VITVI Putative uncharacterized protein (Chromos... 184 3e-45
>tr|A9NL63|A9NL63_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 158
Score = 212 bits (540), Expect = 1e-53
Identities = 107/150 (71%), Positives = 123/150 (82%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSDDE+F+V E VAFESQTIK+M+EDTGT S IPL NVSSKILSKVIEYC+YH +E K
Sbjct: 10 KSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYH-VEAQK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
D+K A++++++K WD EF+KVDQATLFDLILAANYLNI++LLDLTCQ VADMI TP
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTP 128
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 129 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158
>tr|A9NX34|A9NX34_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 158
Score = 212 bits (539), Expect = 2e-53
Identities = 107/150 (71%), Positives = 122/150 (81%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSDDE+F+V E VAFESQTIK+M+EDTGT S IPL NVSSKILSKVIEYC+YH +E K
Sbjct: 10 KSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYH-VEAQK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
D+K A++++++K WD EF+KVDQATLFDLILAANYLNI+ LLDLTCQ VADMI TP
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVDQATLFDLILAANYLNIKDLLDLTCQTVADMIKGKTP 128
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 129 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158
>tr|A9RG78|A9RG78_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_104499 PE=4 SV=1
Length = 157
Score = 211 bits (537), Expect = 3e-53
Identities = 107/150 (71%), Positives = 122/150 (81%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSDDEMFEV+E VAFESQ +K+M+EDTG D+ IPL NVSSKIL+KVIEYC+YH +E K
Sbjct: 9 KSSDDEMFEVDEAVAFESQAVKNMIEDTGIDAPIPLPNVSSKILAKVIEYCKYH-VENQK 67
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
DDK A +E++K WDA+F+KVDQATLFDLILAANYLNI++LLDLTCQ VADMI TP
Sbjct: 68 PSDDKQATPEEEIKAWDADFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTP 127
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 128 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
>tr|Q3ZDI8|Q3ZDI8_PICAB SCF ubiquitin ligase OS=Picea abies GN=SCF
E3 PE=2 SV=1
Length = 190
Score = 201 bits (512), Expect = 2e-50
Identities = 101/135 (74%), Positives = 117/135 (86%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSDDE+F+V E VAFESQTIK+M+EDTGT S IPL NVSSKILSKVIEYC+YH +E K
Sbjct: 10 KSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYH-VEAQK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
D+K A++++++K WD EF+KVDQATLFDLILAANYLNI++LLDLTCQ VADMI TP
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTP 128
Query: 363 EEIRKTFNIKKDFTP 407
EEIRKTFNIK DFTP
Sbjct: 129 EEIRKTFNIKNDFTP 143
>tr|A8IJ79|A8IJ79_CHLRE E3 ubiquitin ligase OS=Chlamydomonas
reinhardtii GN=SKP1 PE=4 SV=1
Length = 157
Score = 201 bits (511), Expect = 3e-50
Identities = 100/149 (67%), Positives = 115/149 (77%)
Frame = +3
Query: 6 SSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPKG 185
SSD +MFEV+E VAF+SQT+K++VED GT+ IPL NVS +IL+KVIEY +YH KG
Sbjct: 9 SSDAQMFEVDEDVAFQSQTVKNLVEDAGTEDAIPLPNVSGRILAKVIEYSKYHVEAEKKG 68
Query: 186 GDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTPE 365
DDKP T++DVK WD EF+KVDQATLFDLILAANYLNI+ LLDLTCQ VA MI TPE
Sbjct: 69 ADDKPTKTEDDVKRWDDEFVKVDQATLFDLILAANYLNIKGLLDLTCQTVAQMIKGKTPE 128
Query: 366 EIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EIRKTFNIK DFTP NQWAF+
Sbjct: 129 EIRKTFNIKNDFTPEEEEEVRRENQWAFD 157
>tr|A9PDK8|A9PDK8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 157
Score = 199 bits (507), Expect = 8e-50
Identities = 104/150 (69%), Positives = 118/150 (78%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E FEV+E VA ESQTIK M+E+ D+ IPL NV+SKILSKVIEYC+ H +E PK
Sbjct: 10 KSSDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYCKKH-VETPK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
DD+P+ D+D+K WDAEF+KVDQATLFDLILAANYLNI++LLDLTCQ VADMI TP
Sbjct: 69 S-DDRPSSADDDLKSWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTP 127
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 128 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
>tr|A9PGQ1|A9PGQ1_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 157
Score = 193 bits (490), Expect = 8e-48
Identities = 102/150 (68%), Positives = 117/150 (78%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E FEV+E VA ESQTIK M+ED D+ IPL NV+SK+L+KVIEYC+ H +E PK
Sbjct: 10 KSSDGESFEVDEAVAVESQTIKHMIEDDCADNGIPLPNVTSKVLAKVIEYCKKH-VESPK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
DD+P+ +D+K WDAEF+KVDQATLFDLILAANYLNI++LLDLTCQ VADMI TP
Sbjct: 69 S-DDRPSSAADDLKAWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQRVADMIKGKTP 127
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 128 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
>tr|A5BBC4|A5BBC4_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014362001 PE=4 SV=1
Length = 156
Score = 189 bits (479), Expect = 1e-46
Identities = 101/150 (67%), Positives = 116/150 (77%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E F+V+E VA ESQTIK M+ED D+ IPL NV+SKILSKVIEYC+ H +E PK
Sbjct: 10 KSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH-VEAPK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
++ + DE++K WDA+F+KVDQATLFDLILAANYLNI+SLLDLTCQ VADMI TP
Sbjct: 69 --PEERSGVDEELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTP 126
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 127 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
>tr|A7KZP6|A7KZP6_HUMLU SKP1 component-like 1 OS=Humulus lupulus
PE=2 SV=1
Length = 157
Score = 188 bits (478), Expect = 2e-46
Identities = 100/150 (66%), Positives = 115/150 (76%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E EV+E VA ESQTIK M+ED D+ IPL NV+SKILSKVIEYC+ H + PK
Sbjct: 10 KSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH-VGAPK 68
Query: 183 GGDDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQCVADMIIFLTP 362
+D+ + D+++K WDA+F+KVDQATLFDLILAANYLNI+SLLDLTCQ VADMI TP
Sbjct: 69 A-EDRASSVDDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTP 127
Query: 363 EEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
EEIRKTFNIK DFTP NQWAFE
Sbjct: 128 EEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
>tr|Q7XYF8|Q7XYF8_WHEAT SKP1/ASK1-like protein OS=Triticum aestivum
GN=skp1 PE=2 SV=1
Length = 175
Score = 188 bits (477), Expect = 2e-46
Identities = 103/160 (64%), Positives = 111/160 (69%), Gaps = 10/160 (6%)
Frame = +3
Query: 3 KSSDDEMFEVEEIVAFESQTIKDMVEDTGTDSVIPLLNVSSKILSKVIEYCRYHALEVPK 182
KSSD E FEVEE VA ESQTI+ M+ED D+ IPL NV+SKILSKVIEYC H P
Sbjct: 16 KSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKPA 75
Query: 183 GG----------DDKPALTDEDVKHWDAEFLKVDQATLFDLILAANYLNIQSLLDLTCQC 332
G D PA ED+K+WDAEF+KVDQATLFDLILAANYLNI+ L DLTCQ
Sbjct: 76 DGAAAGAGAGASDAAPAAPAEDLKNWDAEFVKVDQATLFDLILAANYLNIKGLPDLTCQT 135
Query: 333 VADMIIFLTPEEIRKTFNIKKDFTPXXXXXXXXXNQWAFE 452
VADMI TPEEIRKTFNIK DFTP NQWAFE
Sbjct: 136 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 175
|