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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949507
Clone id TST38A01NGRL0006_C19
Library
Length 415
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_C19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGTGGAGGAGGAGGAGGAGGGCATGGTGGGCCTGGTGGCGGTCACGGGGGTGGACATGGA
GGGCCTGGCGGAGGAGGAGGAGGCCATGGTGGCCCTGGTGGTGGTCACGGAGGCCCTGGC
GGTGGCGGTGGCGGTGGCGGCGGCGGCGGCCATGGTGGCCCTGGAGGAGGTGGCGGTCAC
GGCGGCCCTGGCGGAGGTGGTGGAGGTCCTGGCGGTGGCCATGGCGGACCCGGGGGTGGT
CACGGAGGTCATCACTAGATCCAGCCTCTTCTCCTACCCTCACTCTATACATATCATGAG
TACGTGCTCGCTTTGAGCGCTGAGCTCCCCTTCCTTCCTGTTTGTAAGTATTCGAATGTT
CGAAAGGTGAATAAAGTAGGCTAATATGTTGTAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O94892
Definition sp|O94892|ZN432_HUMAN Zinc finger protein 432 OS=Homo sapiens
Align length 59
Score (bit) 32.0
E-value 0.99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949507|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_C19, 5'
         (392 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94892|ZN432_HUMAN Zinc finger protein 432 OS=Homo sapiens GN...    32   0.99 
sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3        31   1.7  
sp|O74381|POF9_SCHPO F-box protein pof9 OS=Schizosaccharomyces p...    30   3.8  
sp|P26377|STP2_BOVIN Nuclear transition protein 2 OS=Bos taurus ...    29   6.4  
sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2        29   8.4  

>sp|O94892|ZN432_HUMAN Zinc finger protein 432 OS=Homo sapiens
           GN=ZNF432 PE=1 SV=1
          Length = 652

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -2

Query: 376 LYSPFEHSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSS----DDLRDHPRVRHGHR 212
           LYS  + S + K     +Q SK  RTH++ +  V  E G +      L DH RV  G +
Sbjct: 173 LYSAAKFSVSTKANSTKSQVSKHQRTHEIEKNHVCSECGKAFVKKSQLTDHERVHTGEK 231


>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
          Length = 4061

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
 Frame = -2

Query: 382  SLLYSPFEHSNTYKQEG------RGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRH 221
            S LY    H  +    G      RG Q S+  +  D  R    ++    D +R HP    
Sbjct: 2737 SFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHSASQDG--QDTIRGHPGSSR 2794

Query: 220  GHRQDLHH 197
            G RQ  HH
Sbjct: 2795 GGRQGYHH 2802



 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
 Frame = -2

Query: 382  SLLYSPFEHSNTYKQEG------RGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRH 221
            S LY    H  +    G      RG Q S+  +  D  R    +     D +R HP    
Sbjct: 3061 SFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHSASQYG--QDTIRGHPGSSR 3118

Query: 220  GHRQDLHH 197
            G RQ  HH
Sbjct: 3119 GGRQGYHH 3126



 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = -2

Query: 358  HSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQDLHH 197
            H  T    GR  Q S   +  D  R    +E    D +R HP  R G RQ  HH
Sbjct: 1131 HGRTRTSTGR-RQGSHHEQARDSSRHSASQEG--QDTIRAHPGSRRGGRQGSHH 1181



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = -2

Query: 367  PFEHSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHR 212
            P  H       G  A  S+++ TH       G+   S +  R  P  RHG R
Sbjct: 1309 PGFHQEDRASHGHSADSSRQSGTHHTESSSHGQAVSSHEQARSSPGERHGSR 1360


>sp|O74381|POF9_SCHPO F-box protein pof9 OS=Schizosaccharomyces
           pombe GN=pof9 PE=1 SV=1
          Length = 467

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 227 DPGVVTEVITRSSLFSYPHSIHIMSTC 307
           DP +V++  T  ++ S PH IH   TC
Sbjct: 384 DPSIVSDPRTARNIVSIPHQIHFSGTC 410


>sp|P26377|STP2_BOVIN Nuclear transition protein 2 OS=Bos taurus
           GN=TNP2 PE=2 SV=2
          Length = 132

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 355 SNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHR 212
           S +  +  R    S+R R+H     R G+  G S  LR H    H H+
Sbjct: 37  SRSRSRSCRSRSSSRRPRSHRSPTGRQGQSPGPSPPLRRHRHTMHSHQ 84


>sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2
          Length = 2850

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -2

Query: 358  HSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQDLHH 197
            HS++Y+Q G  + +S R+  H       G  +GSS     H     G RQ L H
Sbjct: 953  HSSSYEQHGSRSGQSSRSEQH-------GSSSGSSSSYGQH---GSGSRQSLGH 996
tr_hit_id A1CVY8
Definition tr|A1CVY8|A1CVY8_NEOFI Putative uncharacterized protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 68
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949507|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_C19, 5'
         (392 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CVY8|A1CVY8_NEOFI Putative uncharacterized protein OS=Neosa...    36   1.1  
tr|Q6DEM1|Q6DEM1_DANRE Snrp70 protein (Fragment) OS=Danio rerio ...    35   2.4  
tr|Q9K990|Q9K990_BACHD BH2760 protein OS=Bacillus halodurans GN=...    33   5.4  
tr|A7RHY2|A7RHY2_NEMVE Predicted protein OS=Nematostella vectens...    33   5.4  
tr|Q4R4C3|Q4R4C3_MACFA Testis cDNA clone: QtsA-11071, similar to...    33   7.1  
tr|Q6DRE8|Q6DRE8_DANRE U1 small ribonucleoprotein 70kd OS=Danio ...    33   9.3  
tr|Q2JE19|Q2JE19_FRASC Putative uncharacterized protein OS=Frank...    33   9.3  
tr|B4I2S9|B4I2S9_DROSE GM18379 (Fragment) OS=Drosophila sechelli...    33   9.3  

>tr|A1CVY8|A1CVY8_NEOFI Putative uncharacterized protein
            OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
            NRRL 181) GN=NFIA_102750 PE=4 SV=1
          Length = 1169

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
 Frame = -2

Query: 358  HSNTYKQEGRGAQRS---------KRARTHDMYRVRVGEEA--GSSDDLRDHPRVRHGHR 212
            HS+ +  EGRG+ RS         ++AR     R R  EEA      +  DH R RHG  
Sbjct: 1080 HSHRHSHEGRGSDRSTSSHHAEEEEQARRERRARRRAAEEAEQAKEREATDHHRHRHGGE 1139

Query: 211  QDLHHLRQ 188
               HH R+
Sbjct: 1140 TRHHHHRR 1147


>tr|Q6DEM1|Q6DEM1_DANRE Snrp70 protein (Fragment) OS=Danio rerio
           GN=snrnp70 PE=2 SV=1
          Length = 306

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 343 KQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHG 218
           ++  R  +R +R R+H+  R   G+EAG S   R+  R R G
Sbjct: 251 RRRSRSRERRRRTRSHERERAAAGDEAGGSSRRRERERERGG 292


>tr|Q9K990|Q9K990_BACHD BH2760 protein OS=Bacillus halodurans
           GN=BH2760 PE=3 SV=1
          Length = 380

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -2

Query: 361 EHSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQDLHH 197
           +H +++++ G G         HD       EE G  +D  DH    HGH +D HH
Sbjct: 160 DHDHSHEEHGHGED------DHDHSH----EEHGHEEDDHDHSHEEHGHEEDDHH 204


>tr|A7RHY2|A7RHY2_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g238402 PE=4 SV=1
          Length = 644

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -2

Query: 346 YKQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQDLHHLRQ 188
           YK+      R ++ R   M  VR GE+A  ++ ++   R++ G R++  HL++
Sbjct: 253 YKEIQERMIREEKERLQKMEEVRKGEDAEMAEKIKKRLRIQEGEREESSHLQE 305


>tr|Q4R4C3|Q4R4C3_MACFA Testis cDNA clone: QtsA-11071, similar to
           human zinc finger protein 432 (ZNF432), OS=Macaca
           fascicularis PE=2 SV=1
          Length = 624

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -2

Query: 376 LYSPFEHSNTYKQEGRGAQRSKRARTHDMYRVRVGEEAGSS----DDLRDHPRVRHGHR 212
           LYS  + S + K     +Q SK  RTH++ +  +  E G +      L DH RV  G +
Sbjct: 173 LYSAAKFSVSTKSSSTKSQVSKHQRTHEIEKTHICSECGKAFVKKSQLTDHERVHTGEK 231


>tr|Q6DRE8|Q6DRE8_DANRE U1 small ribonucleoprotein 70kd OS=Danio
           rerio GN=snrnp70 PE=2 SV=1
          Length = 495

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 343 KQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHG 218
           ++  R  +R +  R+H+  R   G+EAG S   R+  R R G
Sbjct: 251 RRRSRSRERRRHTRSHERERAAAGDEAGGSSRRRERERERGG 292


>tr|Q2JE19|Q2JE19_FRASC Putative uncharacterized protein OS=Frankia
           sp. (strain CcI3) GN=Francci3_1092 PE=4 SV=1
          Length = 108

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 334 GRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQDL 203
           GRG++  +R      Y  R+    G  D + DHPR+R  HR D+
Sbjct: 52  GRGSRSGERVSRE--YASRIANAKGFPDPILDHPRLRLWHRADV 93


>tr|B4I2S9|B4I2S9_DROSE GM18379 (Fragment) OS=Drosophila sechellia
           GN=GM18379 PE=4 SV=1
          Length = 1646

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 343 KQEGRGAQRSKRARTHDMYRVRVGEEAGSSDDLRDHPRVRHGHRQ 209
           K+EGR A  S  +   D      G E+ S +DL+ HP  +H H Q
Sbjct: 432 KKEGRSAGNSSNSSESDSSES--GSESSSKNDLQHHPNHQHHHHQ 474