| DK949508 |
| Clone id |
TST38A01NGRL0006_C20 |
| Library |
TST38 |
| Length |
641 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_C20. 5' end sequence. |
| Accession |
DK949508 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL2742Contig1 |
| Sequence |
CAAATTAAGGATGGATGGAGACAAGCCCTATGTTACCGATAACTCCAACTATATTGTCGA TCTCTATTTCAAGTCACCCATAAAGGATGCCCGGGCAGCAGCCAAGGCCATTGAGTCGCT TGAAGGTGTTGTGGATCATGGGCTATTTCTTGACATGGCAACCGCAGTTATTATTGCTGG TGCAGATGGTATCACTGTGAAAACCAAATAAGTAAAGGACATGGGCTGGGACTCACCGCA GTTTCATGTTACAAGTCATTTCATACCCTCCTGATTTTGGGGTTGAGGTTTGCTGAATTT TTCACCCCTTTATAAGAAGAAATGGAGAAATTCTTTTGTACAGTTAAATGTTTCTATGCG GAGAGTATGTGACCTTTGCTTTCATTCAAAGGGGGCTAGGTCAAGATCAAAGCATAAAGT GTGCAAGGTACTTGGCATCAGGTTGTGCCAGCAAAGGAGGCGCATCTTGCGGATCTTGCG TGACAGCACCACCTCTGAATTTTGATAGGACCTCTAGGGTTGACAGTATCAGCAGCCTTA CAGACTGTGTTTGGATGAAGGGAAGATACCGATGTACGATTTCAGTGGATGCTATCTGTC ATACCTGGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9ZU38 |
| Definition |
sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana |
| Align length |
62 |
| Score (bit) |
68.9 |
| E-value |
2.0e-11 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TF97 |
| Definition |
tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
69 |
| Score (bit) |
119.0 |
| E-value |
2.0e-25 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949508|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_C20, 5' (596 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella paten... 119 2e-25 tr|A9SR64|A9SR64_PHYPA Predicted protein OS=Physcomitrella paten... 118 2e-25 tr|A9NMV1|A9NMV1_PICSI Putative uncharacterized protein OS=Picea... 114 3e-24 tr|B6TI56|B6TI56_MAIZE Ribose-5-phosphate isomerase OS=Zea mays ... 114 6e-24 tr|Q6ZEZ2|Q6ZEZ2_ORYSJ Os07g0176900 protein OS=Oryza sativa subs... 112 1e-23 tr|Q6ZEZ1|Q6ZEZ1_ORYSJ Putative ribose-5-phosphate isomerase OS=... 112 1e-23 tr|B8B7P6|B8B7P6_ORYSI Putative uncharacterized protein OS=Oryza... 112 1e-23 tr|A7Q5Y6|A7Q5Y6_VITVI Chromosome chr14 scaffold_54, whole genom... 110 5e-23 tr|A8IRQ1|A8IRQ1_CHLRE Ribose-5-phosphate isomerase OS=Chlamydom... 108 3e-22 tr|Q9S726|Q9S726_ARATH Putative ribose 5-phosphate isomerase (Pu... 101 3e-20 tr|Q8L9K5|Q8L9K5_ARATH Putative ribose 5-phosphate isomerase OS=... 101 3e-20 tr|Q8RU73|Q8RU73_SPIOL Chloroplast ribose-5-phosphate isomerase ... 99 1e-19 tr|Q5ENN9|Q5ENN9_HETTR Chloroplast ribose-5-phosphate isomerase ... 91 7e-17 tr|B6SGJ7|B6SGJ7_MAIZE Ribose-5-phosphate isomerase OS=Zea mays ... 91 7e-17 tr|Q018K0|Q018K0_OSTTA Chloroplast ribose-5-phosphate isomerase ... 87 9e-16 tr|B8BUF2|B8BUF2_THAPS Predicted protein OS=Thalassiosira pseudo... 86 2e-15 tr|A9PI74|A9PI74_POPTR Putative uncharacterized protein OS=Popul... 85 3e-15 tr|Q2IA08|Q2IA08_PAVLU Chloroplast ribulose phosphate isomerase ... 82 2e-14 tr|B5Y3N7|B5Y3N7_PHATR Predicted protein OS=Phaeodactylum tricor... 82 3e-14 tr|A5BTA5|A5BTA5_VITVI Putative uncharacterized protein OS=Vitis... 80 7e-14 tr|A9P9K7|A9P9K7_POPTR Putative uncharacterized protein OS=Popul... 79 3e-13 tr|A4RY01|A4RY01_OSTLU Predicted protein OS=Ostreococcus lucimar... 79 3e-13 tr|A7P3I3|A7P3I3_VITVI Chromosome chr1 scaffold_5, whole genome ... 78 4e-13 tr|B8BUF5|B8BUF5_THAPS Ribose-5-phosphate isomerase OS=Thalassio... 77 7e-13 tr|A7NZE2|A7NZE2_VITVI Chromosome chr6 scaffold_3, whole genome ... 74 5e-12 tr|B6R814|B6R814_9RHOB Ribose 5-phosphate isomerase A OS=Pseudov... 74 8e-12 tr|Q8LBQ2|Q8LBQ2_ARATH Putative ribose 5-phosphate isomerase OS=... 71 5e-11 tr|Q9C998|Q9C998_ARATH Putative ribose 5-phosphate isomerase; 39... 70 7e-11 tr|Q9C5D1|Q9C5D1_ARATH Putative ribose 5-phosphate isomerase OS=... 69 2e-10 tr|B3L6C0|B3L6C0_PLAKH Ribose 5-phosphate epimerase, putative OS... 69 2e-10
>tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221767 PE=4 SV=1 Length = 320
Score = 119 bits (297), Expect = 2e-25 Identities = 56/69 (81%), Positives = 65/69 (94%) Frame = +2
Query: 2 KLRMDGDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIAG 181 +LRMDGDKPYVTDNSNYI+DLYF+ PIKDA AAA AI +LEGVVDHGLFL+MA+AVIIAG Sbjct: 250 ELRMDGDKPYVTDNSNYIIDLYFQEPIKDANAAAHAISALEGVVDHGLFLNMASAVIIAG 309
Query: 182 ADGITVKTK 208 +DG+TV+TK Sbjct: 310 SDGVTVQTK 318
>tr|A9SR64|A9SR64_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_133835 PE=4 SV=1 Length = 253
Score = 118 bits (296), Expect = 2e-25 Identities = 56/69 (81%), Positives = 65/69 (94%) Frame = +2
Query: 2 KLRMDGDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIAG 181 KLRMDGDKPYVTDNSNYI+DLYF+ PI DA AAA+AI +LEGVVDHGLFL+MA+AVIIAG Sbjct: 183 KLRMDGDKPYVTDNSNYIIDLYFEEPIVDANAAAQAISALEGVVDHGLFLNMASAVIIAG 242
Query: 182 ADGITVKTK 208 +DG+TV+TK Sbjct: 243 SDGVTVQTK 251
>tr|A9NMV1|A9NMV1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 295
Score = 114 bits (286), Expect = 3e-24 Identities = 57/71 (80%), Positives = 64/71 (90%), Gaps = 2/71 (2%) Frame = +2
Query: 2 KLRMDGD--KPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVII 175 KLRMDGD KPY+TDN+NYIVDLYFK+PIKD+RAAAKAI EGVV+HGLFLDMATAVII Sbjct: 225 KLRMDGDGDKPYITDNANYIVDLYFKTPIKDSRAAAKAILGFEGVVEHGLFLDMATAVII 284
Query: 176 AGADGITVKTK 208 AGA+G+ V TK Sbjct: 285 AGAEGVRVTTK 295
>tr|B6TI56|B6TI56_MAIZE Ribose-5-phosphate isomerase OS=Zea mays PE=2 SV=1 Length = 274
Score = 114 bits (284), Expect = 6e-24 Identities = 54/69 (78%), Positives = 63/69 (91%) Frame = +2
Query: 2 KLRMDGDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIAG 181 KLR +GDKPYVTDNSNYIVDLYFK+PIKDA AA + I +LEGVVDHGLFL+MA++VIIAG Sbjct: 206 KLRFEGDKPYVTDNSNYIVDLYFKTPIKDALAAGQEIAALEGVVDHGLFLNMASSVIIAG 265
Query: 182 ADGITVKTK 208 DG++VKTK Sbjct: 266 TDGVSVKTK 274
>tr|Q6ZEZ2|Q6ZEZ2_ORYSJ Os07g0176900 protein OS=Oryza sativa subsp. japonica GN=P0534H07.29-1 PE=2 SV=1 Length = 280
Score = 112 bits (281), Expect = 1e-23 Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 1/70 (1%) Frame = +2
Query: 2 KLRMD-GDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIA 178 KLR+D G KPYVTDNSNYIVDLYFK+PIKDA AA K I +LEGVV+HGLFLDMAT+VIIA Sbjct: 211 KLRLDEGGKPYVTDNSNYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIA 270
Query: 179 GADGITVKTK 208 G DG++VKTK Sbjct: 271 GTDGVSVKTK 280
>tr|Q6ZEZ1|Q6ZEZ1_ORYSJ Putative ribose-5-phosphate isomerase OS=Oryza sativa subsp. japonica GN=P0534H07.29-2 PE=4 SV=1 Length = 258
Score = 112 bits (281), Expect = 1e-23 Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 1/70 (1%) Frame = +2
Query: 2 KLRMD-GDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIA 178 KLR+D G KPYVTDNSNYIVDLYFK+PIKDA AA K I +LEGVV+HGLFLDMAT+VIIA Sbjct: 189 KLRLDEGGKPYVTDNSNYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIA 248
Query: 179 GADGITVKTK 208 G DG++VKTK Sbjct: 249 GTDGVSVKTK 258
>tr|B8B7P6|B8B7P6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25096 PE=4 SV=1 Length = 280
Score = 112 bits (281), Expect = 1e-23 Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 1/70 (1%) Frame = +2
Query: 2 KLRMD-GDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIA 178 KLR+D G KPYVTDNSNYIVDLYFK+PIKDA AA K I +LEGVV+HGLFLDMAT+VIIA Sbjct: 211 KLRLDEGGKPYVTDNSNYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIA 270
Query: 179 GADGITVKTK 208 G DG++VKTK Sbjct: 271 GTDGVSVKTK 280
>tr|A7Q5Y6|A7Q5Y6_VITVI Chromosome chr14 scaffold_54, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031147001 PE=4 SV=1 Length = 283
Score = 110 bits (276), Expect = 5e-23 Identities = 56/70 (80%), Positives = 62/70 (88%), Gaps = 1/70 (1%) Frame = +2
Query: 2 KLRMDGD-KPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIA 178 KLR++ D KPYVTDNSNYIVDLYFK+PIKD+ AA K I S EGVV+HGLFLDMATAVIIA Sbjct: 214 KLRLNPDGKPYVTDNSNYIVDLYFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIA 273
Query: 179 GADGITVKTK 208 G DG+TVKTK Sbjct: 274 GKDGVTVKTK 283
>tr|A8IRQ1|A8IRQ1_CHLRE Ribose-5-phosphate isomerase OS=Chlamydomonas reinhardtii GN=RPI1 PE=4 SV=1 Length = 269
Score = 108 bits (269), Expect = 3e-22 Identities = 51/69 (73%), Positives = 61/69 (88%) Frame = +2
Query: 2 KLRMDGDKPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIAG 181 KLRM+GDKPYVTDNSNYIVDLYF++PIKD++AA+KAI L+GVVDHGLFLDM IIAG Sbjct: 195 KLRMNGDKPYVTDNSNYIVDLYFQTPIKDSQAASKAILGLDGVVDHGLFLDMVDVCIIAG 254
Query: 182 ADGITVKTK 208 A G+TV+ + Sbjct: 255 ATGVTVQER 263
>tr|Q9S726|Q9S726_ARATH Putative ribose 5-phosphate isomerase (Putative ribose 5-phosphate isomerase; 91580-90750) OS=Arabidopsis thaliana GN=T9J14.26 PE=2 SV=1 Length = 276
Score = 101 bits (252), Expect = 3e-20 Identities = 50/70 (71%), Positives = 59/70 (84%), Gaps = 1/70 (1%) Frame = +2
Query: 2 KLRMDGD-KPYVTDNSNYIVDLYFKSPIKDARAAAKAIESLEGVVDHGLFLDMATAVIIA 178 KLR+DGD KPYVTDNSNYI+DLYFK+P+KD AAAK I +GVV+HGLFL MAT+VIIA Sbjct: 207 KLRVDGDGKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIA 266
Query: 179 GADGITVKTK 208 G +G+ V TK Sbjct: 267 GKNGVEVMTK 276
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