DK949510 |
Clone id |
TST38A01NGRL0006_C22 |
Library |
TST38 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_C22. 5' end sequence. |
Accession |
DK949510 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL43Contig1 |
Sequence |
ATGATGTGCACAAAAGTATTAAATACAGTGTGTGGTCAAGTACGCCAAATGGAAACAAAC GATTGGACGAAGCTTACAGGAAGGCTCAGGAGAAATCAGAGGCACCTTCAACCTTGTGTC CGGTCTTCTTCTTTTTCTCGGTCAATTGCAGTGGCCAATTTTGCGGGGTGGCTGAGATGG TTGGGCCTGTTGACTTTGGTAAGAACATGGATTTCTGGCTACAAGGGAAGTGGAATGGTT GCTTGCCTGTCAAATGGCACATCATCAAGGATGTGCCTAATGGCCATTTCAGGCACATAA TCCTGTCCAATAATGACAATAAGCCTGTGACACACAGTCGTGACACTCAAGAGGTGCACT TCCATCAAGGCCTTGAAATGCTGAAAATATTCAAGTTTTTTCCCACAAGAACATCCTTAC TCGACGACTTTGCATTCTACGATGGTCGACAAAGGGTGTTGCAGGAAAGGAAGTCAAGAC AACAGTTGCGGCAGCAGGTGGTGAGGCAGATTAAAGAAAGAGCTTCTGAGAAGGCCAATA TCGTGGTGGATGTGTCTTCAGAGTCTGGAAAAGAGAATAGCAGATCTCCTAATTCTATGG AGAGGACAAGCAATGGCGCTGCTGCTGTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9BYJ9 |
Definition |
sp|Q9BYJ9|YTHD1_HUMAN YTH domain family protein 1 OS=Homo sapiens |
Align length |
162 |
Score (bit) |
169.0 |
E-value |
1.0e-41 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5QM96 |
Definition |
tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
157 |
Score (bit) |
246.0 |
E-value |
1.0e-63 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949510|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_C22, 5' (630 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequen... 246 1e-63 tr|Q5QM95|Q5QM95_ORYSJ Rubisco subunit binding-protein beta subu... 246 1e-63 tr|Q5QM94|Q5QM94_ORYSJ cDNA clone:J013144M15, full insert sequen... 246 1e-63 tr|A2ZWJ5|A2ZWJ5_ORYSJ Putative uncharacterized protein OS=Oryza... 246 1e-63 tr|A2WTS8|A2WTS8_ORYSI Putative uncharacterized protein OS=Oryza... 246 1e-63 tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea m... 245 1e-63 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 243 5e-63 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 243 5e-63 tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole geno... 243 9e-63 tr|A5ACY6|A5ACY6_VITVI Putative uncharacterized protein OS=Vitis... 243 9e-63 tr|Q8W311|Q8W311_ORYSA Putative RNA-binding protein OS=Oryza sat... 237 4e-61 tr|Q10CW7|Q10CW7_ORYSJ Os03g0748000 protein OS=Oryza sativa subs... 237 4e-61 tr|B8AJV8|B8AJV8_ORYSI Putative uncharacterized protein OS=Oryza... 237 4e-61 tr|A7Q4I8|A7Q4I8_VITVI Chromosome chr9 scaffold_49, whole genome... 234 4e-60 tr|A5B5J0|A5B5J0_VITVI Putative uncharacterized protein OS=Vitis... 234 4e-60 tr|Q9LDZ8|Q9LDZ8_ARATH Gb|AAF35955.1 OS=Arabidopsis thaliana PE=... 233 9e-60 tr|Q0WR25|Q0WR25_ARATH Putative uncharacterized protein At3g1306... 233 9e-60 tr|B8AMZ5|B8AMZ5_ORYSI Putative uncharacterized protein OS=Oryza... 232 2e-59 tr|Q10MA6|Q10MA6_ORYSJ Os03g0317000 protein OS=Oryza sativa subs... 231 2e-59 tr|A3AHC9|A3AHC9_ORYSJ Putative uncharacterized protein OS=Oryza... 231 2e-59 tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome ... 230 6e-59 tr|Q0WPP4|Q0WPP4_ARATH Putative uncharacterized protein At3g1733... 227 4e-58 tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative u... 226 1e-57 tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thalian... 226 1e-57 tr|A2YY04|A2YY04_ORYSI Putative uncharacterized protein OS=Oryza... 225 1e-57 tr|Q9LUT8|Q9LUT8_ARATH Arabidopsis thaliana genomic DNA, chromos... 224 3e-57 tr|Q1JPL5|Q1JPL5_ARATH At3g17330 OS=Arabidopsis thaliana PE=2 SV=1 224 3e-57 tr|A8MPR6|A8MPR6_ARATH Uncharacterized protein At3g17330.2 OS=Ar... 224 3e-57 tr|Q9FPE7|Q9FPE7_ARATH Putative uncharacterized protein At1g7927... 224 3e-57 tr|Q6Z0T2|Q6Z0T2_ORYSJ Os08g0556000 protein OS=Oryza sativa subs... 224 3e-57
>tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequence OS=Oryza sativa subsp. japonica GN=B1144G04.45-2 PE=2 SV=1 Length = 609
Score = 246 bits (627), Expect = 1e-63 Identities = 112/157 (71%), Positives = 130/157 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN SGQFCGVAEMV Sbjct: 379 DIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNASGQFCGVAEMV 438
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 439 GPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 498
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 499 PQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 535
>tr|Q5QM95|Q5QM95_ORYSJ Rubisco subunit binding-protein beta subunit-like OS=Oryza sativa subsp. japonica GN=B1144G04.45-1 PE=4 SV=1 Length = 598
Score = 246 bits (627), Expect = 1e-63 Identities = 112/157 (71%), Positives = 130/157 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN SGQFCGVAEMV Sbjct: 368 DIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNASGQFCGVAEMV 427
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 428 GPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 487
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 488 PQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 524
>tr|Q5QM94|Q5QM94_ORYSJ cDNA clone:J013144M15, full insert sequence OS=Oryza sativa subsp. japonica GN=B1144G04.45-3 PE=2 SV=1 Length = 458
Score = 246 bits (627), Expect = 1e-63 Identities = 112/157 (71%), Positives = 130/157 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN SGQFCGVAEMV Sbjct: 228 DIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNASGQFCGVAEMV 287
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 288 GPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 347
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 348 PQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 384
>tr|A2ZWJ5|A2ZWJ5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002917 PE=4 SV=1 Length = 594
Score = 246 bits (627), Expect = 1e-63 Identities = 112/157 (71%), Positives = 130/157 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN SGQFCGVAEMV Sbjct: 364 DIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNASGQFCGVAEMV 423
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 424 GPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 483
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 484 PQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 520
>tr|A2WTS8|A2WTS8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03270 PE=4 SV=1 Length = 594
Score = 246 bits (627), Expect = 1e-63 Identities = 112/157 (71%), Positives = 130/157 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN SGQFCGVAEMV Sbjct: 364 DIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNASGQFCGVAEMV 423
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 424 GPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 483
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 484 PQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 520
>tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 338
Score = 245 bits (626), Expect = 1e-63 Identities = 121/214 (56%), Positives = 145/214 (67%), Gaps = 6/214 (2%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD AYR AQE+ T CPVF FFSVN S QFCGVAEMV Sbjct: 113 DIHKSIKYNVWASTPNGNKRLDNAYRLAQERMAEKGTKCPVFLFFSVNASDQFCGVAEMV 172
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF +NM+FW Q KWNG VKWHIIKDVPN FRHIIL NN+NKPVT+SRDTQEV F Sbjct: 173 GPVDFNRNMNFWQQDKWNGFFSVKWHIIKDVPNPQFRHIILENNENKPVTNSRDTQEVKF 232
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERKSXXXXXXXXXXXIKERASEKANI 542 QG EML IFK F + S+LDDF FY+ RQ+V+Q+R+ E+ +E Sbjct: 233 SQGTEMLNIFKNFTCKASILDDFDFYENRQKVMQDRRGKPLTSFGHPLPKAEKTAEVKRQ 292
Query: 543 VVDVS------SESGKENSRSPNSMERTSNGAAA 626 +S +++ KEN +S+ N A + Sbjct: 293 TQLISATEVGRADTTKENEEKSSSVPEILNAACS 326
>tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019682001 PE=4 SV=1 Length = 416
Score = 243 bits (621), Expect = 5e-63 Identities = 111/158 (70%), Positives = 130/158 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 DVHKSIKY+VWSSTPNGNK+L+ AY AQ + CP+F FFSVN SGQFCGVAEM+ Sbjct: 89 DVHKSIKYNVWSSTPNGNKKLENAYEDAQRIALGKRRGCPIFLFFSVNASGQFCGVAEMI 148
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF K+MDFW Q KW+G PVKWHIIKDVPN +FRHIIL NN+NKPVT+SRDTQE+ F Sbjct: 149 GPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNTNFRHIILENNENKPVTNSRDTQEIRF 208
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERKS 476 QGLEMLKIFK T+TSLLDDF +Y+ RQR++Q+ K+ Sbjct: 209 KQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKT 246
>tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038412 PE=4 SV=1 Length = 1960
Score = 243 bits (621), Expect = 5e-63 Identities = 111/158 (70%), Positives = 130/158 (82%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 DVHKSIKY+VWSSTPNGNK+L+ AY AQ + CP+F FFSVN SGQFCGVAEM+ Sbjct: 397 DVHKSIKYNVWSSTPNGNKKLENAYEDAQRIALGKRRGCPIFLFFSVNASGQFCGVAEMI 456
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 GPVDF K+MDFW Q KW+G PVKWHIIKDVPN +FRHIIL NN+NKPVT+SRDTQE+ F Sbjct: 457 GPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNTNFRHIILENNENKPVTNSRDTQEIRF 516
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERKS 476 QGLEMLKIFK T+TSLLDDF +Y+ RQR++Q+ K+ Sbjct: 517 KQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKT 554
>tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002122001 PE=4 SV=1 Length = 269
Score = 243 bits (619), Expect = 9e-63 Identities = 110/157 (70%), Positives = 131/157 (83%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD AY++A+E+ + CPVF FFSVN SGQFCGVAEM+ Sbjct: 83 DIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNASGQFCGVAEMI 142
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 G VDF KNMDFW Q KWNG PVKWHIIKDVPN RHIIL NNDNKPVT+SRDTQEV F Sbjct: 143 GRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVTNSRDTQEVRF 202
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG+E+L IFK + ++TS+LDDF FY+ RQ+V+Q++K Sbjct: 203 PQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKK 239
>tr|A5ACY6|A5ACY6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005095 PE=4 SV=1 Length = 592
Score = 243 bits (619), Expect = 9e-63 Identities = 110/157 (70%), Positives = 131/157 (83%) Frame = +3
Query: 3 DVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCSGQFCGVAEMV 182 D+HKSIKY+VW+STPNGNKRLD AY++A+E+ + CPVF FFSVN SGQFCGVAEM+ Sbjct: 377 DIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNASGQFCGVAEMI 436
Query: 183 GPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVTHSRDTQEVHF 362 G VDF KNMDFW Q KWNG PVKWHIIKDVPN RHIIL NNDNKPVT+SRDTQEV F Sbjct: 437 GRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVTNSRDTQEVRF 496
Query: 363 HQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 473 QG+E+L IFK + ++TS+LDDF FY+ RQ+V+Q++K Sbjct: 497 PQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKK 533
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