DK949514 |
Clone id |
TST38A01NGRL0006_D02 |
Library |
TST38 |
Length |
541 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_D02. 5' end sequence. |
Accession |
DK949514 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL181Contig1 |
Sequence |
CTTCAATGGAGTGTTCTTGAAAGTGAACAAAGCTACTATAAACATGCTTAGAAGAGTGGA GCCTTATGTCACATATGGGTATCCCAACTTGAAGAGTGTTAAGGAGCTGATTTACAAGAG AGGATTTGGCAAGGTTAGCAAGGCGAGGATTCCTTTGACTGACAATTCAATCATCGAGCA GGCCCTCGGGAAGACTGGCATTATCTGCATTGAGGATCTTATTCATGAGATTTACACTGT CGGCCCACATTTCAAGGAGACAAACAACTTCCTTTGGCCCTTTAAGTTGAGTGCTCCTCT AGGTGGCTTGAAAAAGAAGAGGAACCACTTTATTGAATCTGGAGATGCTGGCAACCGTGA AGATTATGTGAATGCCCTCATCAGAAGAATGAACTAGCTAGTACGGCTATCTGACTAATG TTGGTTGTGGCAAGCTGTTCAACCATTCTCAACTGAGCGCTGGATTTTTTCTTTCCGAAC TTTTGCTAATTTAGTTCAAATTTTGAGCATTTGTGCTAAAAAAAAAAAAAAAAAAAAAAA A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P60039 |
Definition |
sp|P60039|RL73_ARATH 60S ribosomal protein L7-3 OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
236.0 |
E-value |
5.0e-62 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PGL2 |
Definition |
tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
131 |
Score (bit) |
242.0 |
E-value |
7.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949514|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_D02, 5' (517 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Popul... 242 7e-63 tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guinee... 241 2e-62 tr|A7QUB3|A7QUB3_VITVI Chromosome chr11 scaffold_177, whole geno... 240 4e-62 tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Popul... 238 1e-61 tr|A9P9W9|A9P9W9_POPTR Putative uncharacterized protein OS=Popul... 238 1e-61 tr|B7FH82|B7FH82_MEDTR Putative uncharacterized protein OS=Medic... 237 3e-61 tr|Q2HVI3|Q2HVI3_MEDTR Ribosomal protein L30 OS=Medicago truncat... 236 4e-61 tr|A7R2M6|A7R2M6_VITVI Chromosome undetermined scaffold_436, who... 236 4e-61 tr|Q3EBG6|Q3EBG6_ARATH Uncharacterized protein At2g44120.2 OS=Ar... 236 5e-61 tr|Q38HU4|Q38HU4_SOLTU Thaliana 60S ribosomal protein L7 (At2g44... 235 9e-61 tr|Q5I7K6|Q5I7K6_WHEAT Ribosomal protein L7 OS=Triticum aestivum... 234 1e-60 tr|Q0JAC6|Q0JAC6_ORYSJ Os04g0605900 protein OS=Oryza sativa subs... 234 1e-60 tr|B8ATU3|B8ATU3_ORYSI Putative uncharacterized protein OS=Oryza... 234 1e-60 tr|Q6YYR2|Q6YYR2_ORYSJ Os08g0234000 protein OS=Oryza sativa subs... 234 2e-60 tr|A3BQX7|A3BQX7_ORYSJ Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|A2YSN9|A2YSN9_ORYSI Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|B4FTW5|B4FTW5_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 234 3e-60 tr|A9T4E1|A9T4E1_PHYPA Predicted protein OS=Physcomitrella paten... 233 4e-60 tr|B4FSG3|B4FSG3_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 233 6e-60 tr|A9RG91|A9RG91_PHYPA Predicted protein OS=Physcomitrella paten... 233 6e-60 tr|B4FQ03|B4FQ03_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 232 7e-60 tr|B4F8K1|B4F8K1_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 232 7e-60 tr|B7FHC4|B7FHC4_MEDTR Putative uncharacterized protein OS=Medic... 232 1e-59 tr|A7R2M9|A7R2M9_VITVI Chromosome undetermined scaffold_436, who... 232 1e-59 tr|A9TJB0|A9TJB0_PHYPA Predicted protein OS=Physcomitrella paten... 231 1e-59 tr|A9RTM8|A9RTM8_PHYPA Predicted protein OS=Physcomitrella paten... 231 1e-59 tr|Q7X8D0|Q7X8D0_ORYSJ OSJNBa0035M09.3 protein (Putative unchara... 229 6e-59 tr|A9RCC4|A9RCC4_PHYPA Predicted protein OS=Physcomitrella paten... 228 1e-58 tr|A9P1J6|A9P1J6_PICSI Putative uncharacterized protein OS=Picea... 228 1e-58 tr|A9NPA4|A9NPA4_PICSI Putative uncharacterized protein OS=Picea... 228 1e-58
>tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 243
Score = 242 bits (618), Expect = 7e-63 Identities = 112/131 (85%), Positives = 123/131 (93%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NMLRRVEPYVTYGYPNLKSV+ELIYKRGFGK+++ RIPLTDNSIIEQ Sbjct: 113 FNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVRELIYKRGFGKLNQQRIPLTDNSIIEQ 172
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 LGK GIIC+EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRNH++E GDAGNRE Sbjct: 173 GLGKRGIICVEDLIHEIITVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 232
Query: 362 DYVNALIRRMN 394 +Y+N LIRRMN Sbjct: 233 NYINELIRRMN 243
>tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 244
Score = 241 bits (615), Expect = 2e-62 Identities = 112/131 (85%), Positives = 122/131 (93%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRG+GK++K R+PL+DNSIIEQ Sbjct: 114 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRVPLSDNSIIEQ 173
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 LGK GIICIEDL+HEI TVGPHFKE NNFLWPFKL APLGGLKKKR H++E GDAGNRE Sbjct: 174 GLGKYGIICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRKHYVEGGDAGNRE 233
Query: 362 DYVNALIRRMN 394 +Y+N LIRRMN Sbjct: 234 NYINELIRRMN 244
>tr|A7QUB3|A7QUB3_VITVI Chromosome chr11 scaffold_177, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006768001 PE=3 SV=1 Length = 245
Score = 240 bits (612), Expect = 4e-62 Identities = 113/131 (86%), Positives = 121/131 (92%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GK++K R LTDNSIIEQ Sbjct: 115 FNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIIEQ 174
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 ALGK GIICIEDLIHEI TVGPHFKE NNFLWPFKL APLGGLKKKRNH++E GDAGNRE Sbjct: 175 ALGKFGIICIEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRE 234
Query: 362 DYVNALIRRMN 394 DY+N LIRRMN Sbjct: 235 DYINELIRRMN 245
>tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 244
Score = 238 bits (608), Expect = 1e-61 Identities = 110/131 (83%), Positives = 122/131 (93%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NML RVEPYVT+GYPNLKSV+ELIYKRGFGK+++ RIPLTDNSIIEQ Sbjct: 114 FNGVFLKVNKATVNMLHRVEPYVTFGYPNLKSVRELIYKRGFGKLNQQRIPLTDNSIIEQ 173
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 LGK GIIC+EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRNH++E GDAGNRE Sbjct: 174 GLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 233
Query: 362 DYVNALIRRMN 394 +Y+N LIRRMN Sbjct: 234 NYINELIRRMN 244
>tr|A9P9W9|A9P9W9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 244
Score = 238 bits (607), Expect = 1e-61 Identities = 110/131 (83%), Positives = 121/131 (92%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NML RVEPYVT+GYPNLKSVKELIYKRGFGK+++ RIPLTDNSI+EQ Sbjct: 114 FNGVFLKVNKATVNMLHRVEPYVTFGYPNLKSVKELIYKRGFGKLNQQRIPLTDNSIVEQ 173
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 LGK GIIC EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRNH++E GDAGNRE Sbjct: 174 GLGKHGIICTEDLIHEIITVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 233
Query: 362 DYVNALIRRMN 394 D++N LIRRMN Sbjct: 234 DFINELIRRMN 244
>tr|B7FH82|B7FH82_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 244
Score = 237 bits (604), Expect = 3e-61 Identities = 110/130 (84%), Positives = 120/130 (92%) Frame = +2
Query: 5 NGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQA 184 NGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GKV + RI LTDNSIIEQ Sbjct: 115 NGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQV 174
Query: 185 LGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRED 364 LGK GIICIEDLIHEI TVGPHF+E NNFLWPFKL APLGG+KKKRNH++ESGDAGNRED Sbjct: 175 LGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRNHYVESGDAGNRED 234
Query: 365 YVNALIRRMN 394 Y+N LIR+MN Sbjct: 235 YINELIRKMN 244
>tr|Q2HVI3|Q2HVI3_MEDTR Ribosomal protein L30 OS=Medicago truncatula GN=MtrDRAFT_AC148819g1v2 PE=3 SV=1 Length = 244
Score = 236 bits (603), Expect = 4e-61 Identities = 110/130 (84%), Positives = 119/130 (91%) Frame = +2
Query: 5 NGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQA 184 NGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GKV + RI LTDNSIIEQ Sbjct: 115 NGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQV 174
Query: 185 LGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRED 364 LGK GIICIEDLIHEI TVGPHF+E NNFLWPFKL APLGG+KKKRNH++E GDAGNRED Sbjct: 175 LGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRNHYVEGGDAGNRED 234
Query: 365 YVNALIRRMN 394 Y+N LIRRMN Sbjct: 235 YINELIRRMN 244
>tr|A7R2M6|A7R2M6_VITVI Chromosome undetermined scaffold_436, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013102001 PE=3 SV=1 Length = 186
Score = 236 bits (603), Expect = 4e-61 Identities = 110/131 (83%), Positives = 121/131 (92%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GK++K R LTDNSI+EQ Sbjct: 56 FNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQ 115
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 ALGK GIIC+EDLIHEI TVGPHFKE NNFLWPFKL APLGGLKKKRNH++E GDAGNRE Sbjct: 116 ALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRE 175
Query: 362 DYVNALIRRMN 394 +Y+N LIRRMN Sbjct: 176 NYINELIRRMN 186
>tr|Q3EBG6|Q3EBG6_ARATH Uncharacterized protein At2g44120.2 OS=Arabidopsis thaliana GN=At2g44120 PE=3 SV=1 Length = 247
Score = 236 bits (602), Expect = 5e-61 Identities = 108/131 (82%), Positives = 122/131 (93%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NMLRRVEPYVTYGYPNLKSVKELIYKRG+GK++ RI LTDNSI++Q Sbjct: 117 FNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQ 176
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 ALGK GIIC+EDLIHEI TVGPHFKE NNFLWPF+L APLGGLKKKRNH++E GDAGNRE Sbjct: 177 ALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 236
Query: 362 DYVNALIRRMN 394 +++N L+RRMN Sbjct: 237 NFINELVRRMN 247
>tr|Q38HU4|Q38HU4_SOLTU Thaliana 60S ribosomal protein L7 (At2g44120) OS=Solanum tuberosum PE=2 SV=1 Length = 242
Score = 235 bits (600), Expect = 9e-61 Identities = 107/131 (81%), Positives = 120/131 (91%) Frame = +2
Query: 2 FNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKVSKARIPLTDNSIIEQ 181 FNGVFLKVNKAT+NML RVEPYVTYGYPNLKS+KELIYKRG+GKV K RI LTDN+++EQ Sbjct: 112 FNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSIKELIYKRGYGKVDKQRIALTDNAVVEQ 171
Query: 182 ALGKTGIICIEDLIHEIYTVGPHFKETNNFLWPFKLSAPLGGLKKKRNHFIESGDAGNRE 361 LGK GIICIEDL+HEI TVGPHFKE NNFLWPF+L APLGGLKKKRNH++E GDAGNRE Sbjct: 172 VLGKHGIICIEDLVHEIITVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 231
Query: 362 DYVNALIRRMN 394 +++N LIRRMN Sbjct: 232 NFINELIRRMN 242
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