DK949575 |
Clone id |
TST38A01NGRL0006_F16 |
Library |
TST38 |
Length |
699 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_F16. 5' end sequence. |
Accession |
DK949575 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL385Contig1 |
Sequence |
CTTTCGATGCGGGCCTTTGAGTGTATCGTCTGCAAACGCGCATCGTCAGGTGACTGCTAG GGCTTTTTCACGTCCTTCCGCTCTGCGATCGGCCTCTCTTCTTCTCTCCGAGCGCCAGTT TTCAGATCGCACCTCGTCTTTCATAAGTTTTGGATTCAGTGGTGACATTCTGTCTTTGAG AACGGATTTTGGCAAGGTCCACCCTTTTGGCTGCCATGTCGGCGGTGGTTTGTGGCAAGC GGTCTCTCTTTGACGAAATTCACCCCCCTATTCCAAAGAGGCTTCGCTGTGGAGGAGGAA CTTCTCCTGTTCGATTTGCTTCCTTGAGGAGTGGTTCTCCTGTGGGCTCTTGTGAAGCAG GCTCACCTTCTCTATCTGACTTGTCAGACCAACTTTCCCATCTGAGAACCCTTTTTCCTG AGATGGATGGGCAGCTAATTGAAAAGGTCTTGGAGTCTAGTGGAAACAACCTTGACTCTG CAATACGAAGTCTCAATGAGCTTCGGCTTAGCTCTGATGTCGTGGCAAATGCCTTGAATT TCTCCAATGACAATAGTGCACCAAACCTGACTCTTGGGCAGGAAGGTGTGGCAAATCAAT CAGCTGTTTTGAATGCCGTGGAGGTTGATAAAGCGAATCAGGGTCAATCTGAAGGGAGTG AATGGGCAGACTTGTTTGTACGAGAAATGCTTAGTGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62501 |
Definition |
sp|P62501|T22D1_RAT TSC22 domain family protein 1 OS=Rattus norvegicus |
Align length |
61 |
Score (bit) |
34.7 |
E-value |
0.51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PF87 |
Definition |
tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
168 |
Score (bit) |
106.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949575|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_F16, 5' (699 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genom... 106 1e-21 tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Popul... 103 1e-20 tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Popul... 98 4e-19 tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella paten... 95 5e-18 tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea... 95 5e-18 tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella paten... 93 2e-17 tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g3244... 91 7e-17 tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g3244... 91 7e-17 tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Ar... 91 7e-17 tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays... 87 1e-15 tr|Q67WV6|Q67WV6_ORYSJ Os06g0642900 protein OS=Oryza sativa subs... 80 1e-13 tr|A3A3V8|A3A3V8_ORYSJ Putative uncharacterized protein OS=Oryza... 80 1e-13 tr|A2X1Q4|A2X1Q4_ORYSI Putative uncharacterized protein OS=Oryza... 80 1e-13 tr|B4FYB7|B4FYB7_MAIZE Putative uncharacterized protein OS=Zea m... 79 3e-13 tr|B6TCB4|B6TCB4_MAIZE CUE domain containing protein OS=Zea mays... 77 8e-13 tr|B6T3P8|B6T3P8_MAIZE CUE domain containing protein OS=Zea mays... 75 4e-12 tr|B4G1V5|B4G1V5_MAIZE Putative uncharacterized protein OS=Zea m... 74 1e-11 tr|Q0E3B5|Q0E3B5_ORYSJ Os02g0184500 protein OS=Oryza sativa subs... 68 5e-10 tr|Q6H880|Q6H880_ORYSJ Putative uncharacterized protein OJ1572_F... 67 1e-09 tr|A7PNK4|A7PNK4_VITVI Chromosome chr8 scaffold_23, whole genome... 66 2e-09 tr|B8B0S4|B8B0S4_ORYSI Putative uncharacterized protein OS=Oryza... 64 9e-09 tr|Q6UUK2|Q6UUK2_ORYSJ Putative uncharacterized protein (Putativ... 63 2e-08 tr|A5B8J1|A5B8J1_VITVI Putative uncharacterized protein OS=Vitis... 58 5e-07 tr|B8B0S3|B8B0S3_ORYSI Putative uncharacterized protein OS=Oryza... 49 4e-04 tr|Q67WV8|Q67WV8_ORYSJ Putative uncharacterized protein P0416A11... 48 7e-04 tr|Q0DAN6|Q0DAN6_ORYSJ Os06g0642600 protein OS=Oryza sativa subs... 48 7e-04 tr|Q0J3G0|Q0J3G0_ORYSJ Os09g0119100 protein OS=Oryza sativa subs... 47 9e-04 tr|A3BW42|A3BW42_ORYSJ Putative uncharacterized protein OS=Oryza... 47 9e-04 tr|A2YYJ3|A2YYJ3_ORYSI Putative uncharacterized protein OS=Oryza... 47 9e-04 tr|Q9SSD3|Q9SSD3_ARATH F18B13.13 protein (Putative uncharacteriz... 45 0.003
>tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016953001 PE=4 SV=1 Length = 283
Score = 106 bits (265), Expect = 1e-21 Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 7/168 (4%) Frame = +3
Query: 216 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 389 MSA+VCGKRS F+++ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEDLPTTPPVSKRIRCSS-SSPVRFSPPRS---ISASPSQSQSTASQAS 56
Query: 390 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSAPNL 569 R LFP+MD Q +EK LE GN+LDS I+SLNELRL S N L F S L Sbjct: 57 VLDHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGS--AQNNLGFGAGTSDVGL 114
Query: 570 ----TLGQEGVANQSAVLNAVEVDKANQGQS-EGSEWADLFVREMLSA 698 L +GVA + + + E A + S +G+EW +LFVREM+SA Sbjct: 115 ETKVQLQSQGVAATNGEVVSSEDPSAPKNLSMDGAEWVELFVREMMSA 162
>tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 286
Score = 103 bits (257), Expect = 1e-20 Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 10/171 (5%) Frame = +3
Query: 216 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNTLASNPPSFNFGSSSSS 59
Query: 387 XXXXXXR--TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSS----DVVANALNFSN 548 + +FP+MD QLIEKVLE G++LDSAIRSLN+LRL S A+ + + Sbjct: 60 SSTLIEQLAAIFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRLGSAENFSAAADKSDVID 119
Query: 549 DNSAPNLTLGQEGVANQSAVLNAVEVDKANQGQS-EGSEWADLFVREMLSA 698 +++ P +GVA A E A+ S +G+EW +LFVREM+SA Sbjct: 120 ESNVP-----AQGVATTGAEAPPTEDLSASAHLSLDGAEWVELFVREMMSA 165
>tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 285
Score = 98.2 bits (243), Expect = 4e-19 Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 6/167 (3%) Frame = +3
Query: 216 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + S A Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNT-IASNPASFNFSSSSS 58
Query: 387 XXXXXXRTL---FPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNS 557 L FP+MD QL+EK LE G++LD AIRSLNELRL+S +A +D Sbjct: 59 SSSAFVEQLAAIFPDMDKQLLEKALEECGDDLDLAIRSLNELRLASVENFSAAAVKSD-V 117
Query: 558 APNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 + +G+A A + + +G EW +LFVREM+SA Sbjct: 118 MDKANVPPQGLAPTDAEAPTEDPSASALLSMDGMEWVELFVREMMSA 164
>tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191879 PE=4 SV=1 Length = 287
Score = 94.7 bits (234), Expect = 5e-18 Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 7/168 (4%) Frame = +3
Query: 216 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 389 MSA VCGKRSLF+++ PPI KRLR G SP+ FAS S P GS + Sbjct: 1 MSAAVCGKRSLFEDLRSSPPISKRLRFAQGNSPIWFASATSSPPSGSSPS-FEPRLEAGL 59
Query: 390 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSN---DNSA 560 LFP+M+ Q +EKVLE+S N+LD AI+SLN LRL S A + S+ Sbjct: 60 LLSQLHALFPDMEEQAVEKVLEASNNDLDYAIKSLNLLRLYSSQQATPPHPDEKDASGSS 119
Query: 561 PNLTLGQEGV-ANQSAVLNAVEVDKANQG-QSEGSEWADLFVREMLSA 698 P+L+ + +S + E + N QSEG +W +L V +M +A Sbjct: 120 PSLSSFPSRLDEGRSQQVQQQEAEYTNSTVQSEGVKWVELLVTQMQNA 167
>tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 94.7 bits (234), Expect = 5e-18 Identities = 64/169 (37%), Positives = 89/169 (52%), Gaps = 8/169 (4%) Frame = +3
Query: 216 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 389 MSA+VCGKRSLF+++H PPI KRLRC G SP+RF++ + + Sbjct: 1 MSALVCGKRSLFEDLHTPPPISKRLRCSGSNSPIRFSANSPTRSPTATDIHHQNQSTEIH 60
Query: 390 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSD---VVANALNFSNDNSA 560 R LFP+MD Q +E VLES GN+L SAI+SLNELRL + + + +S S Sbjct: 61 HLSQLRGLFPDMDEQHLEAVLESCGNDLASAIKSLNELRLGRERDSIPCKSTAYSIIASH 120
Query: 561 PNLTLGQE---GVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 + T G+ + V N A GS+W +L ++EM +A Sbjct: 121 VDQTTEVNTDIGLPVEDRVANDQVGGAAAAIPVNGSDWVELLLQEMQNA 169
>tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228060 PE=4 SV=1 Length = 285
Score = 92.8 bits (229), Expect = 2e-17 Identities = 65/167 (38%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Frame = +3
Query: 216 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 389 MSA VCGKRSLF+++H PP KRLR G SP+ FA+ S P GS Sbjct: 1 MSAAVCGKRSLFEDLHCSPPTSKRLRFAQGNSPLWFATATSTPPSGSSPC-FELRPEADL 59
Query: 390 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA--- 560 LFP+M+ ++EKVL +S N+LD AI+SLN LRLSS A A +D A Sbjct: 60 LLSQLHALFPDMEEHVVEKVLGASNNDLDYAIKSLNLLRLSSSQQA-ATTLPSDQDATVL 118
Query: 561 -PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 P L + + S ++ QSEG +W +L V +M +A Sbjct: 119 CPPLPIFSDCPDELSMQQQQQAESTSSPVQSEGGKWVELLVTQMQNA 165
>tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 90.9 bits (224), Expect = 7e-17 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%) Frame = +3
Query: 216 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 387 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 560 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDRQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 561 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 PN+ Q+G A + N + +D G+EW +LFVREM++A Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEWVELFVREMMNA 143
>tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 90.9 bits (224), Expect = 7e-17 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%) Frame = +3
Query: 216 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 387 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 560 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 561 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 PN+ Q+G A + N + +D G+EW +LFVREM++A Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEWVELFVREMMNA 143
>tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Arabidopsis thaliana GN=At5g32440 PE=4 SV=1 Length = 187
Score = 90.9 bits (224), Expect = 7e-17 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%) Frame = +3
Query: 216 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 387 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 560 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 561 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 PN+ Q+G A + N + +D G+EW +LFVREM++A Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEWVELFVREMMNA 143
>tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays PE=2 SV=1 Length = 282
Score = 87.0 bits (214), Expect = 1e-15 Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 8/169 (4%) Frame = +3
Query: 216 MSAVVCGKRS---LFDEIHPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 386 MSAVVCGKRS DE+ PP P +P R S RS S GS + Sbjct: 1 MSAVVCGKRSSSIFADELLPPSPTSPHSSHQPAPKR--SRRSPSHRGSSDGHRREALVHH 58
Query: 387 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL-SSDVVANALNFSNDNSAP 563 LFP+MD QL+EK LE+SG++LDSAI+SLN LRL S++ + ++ F ++N Sbjct: 59 LLL-----LFPDMDPQLLEKALEASGDDLDSAIKSLNLLRLESAEAILSSTGFKSENGQH 113
Query: 564 N-LTLGQEGVAN---QSAVLNAVEVDKANQGQSEGSEWADLFVREMLSA 698 + EG++N + + VD Q GSEW +LFVREM +A Sbjct: 114 TAIQPAVEGISNGGVDTTTEHHPTVDN-YQTSKNGSEWVELFVREMTNA 161
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