DK949590 |
Clone id |
TST38A01NGRL0006_G08 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_G08. 5' end sequence. |
Accession |
DK949590 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL457Contig1 |
Sequence |
CACGTACGCGCACGTAATAAGTCTGTGACTGTGTGTGTTCGTGTGTGTGTGTTTCCATAG CCGGAGCGCCCTTATACACGCACGCGCGCACACACAGACACTCACACAGAAGAAATCATG GCGCCCAAGAAGGTTCTCGACCCCGACACCATCAATGAGAACATCAAGAAGCTGGTATAT GCCGTACGTGGGGAGCTCTATATCCGCGCTTCTGAGCTGCAGAAAGAAGGCAAAAAGATT ATCTTTACCAATGTTGGCAACCCTCATGCACTCGGGCAGAAACCGTTGACATTTCCTCGC CAGGTGATGGCTCTTTGTCAGGCACCTTTTTTGATGGAAGATCTCAATGTGGACCTGTTA TTCCCTGCTGATGTTATTGCTAGAGCAAAGCTTTATTTGTCTTACACATCTGGTGGACTT GGTGCGTATAGTGATTCTCGTGGATTACCTGGCATTAGGCAGGAAGTTGCCAATTTTCTT CTCCAGCGTGATGGGTATCCAAGTGATCCCGAACTGATTTTCCTCACTGATGGAGCTAGT AAAGGTGTCATGCAACTTCTCAACATGATTGTTCGGAACAAGAATGATGGGGTGTTGTGT CCTATACCACAATATCCTCTCTACTCTGCTACAATTGAGNCTGGTTGGTGGAACTTTAGT CCCTTATTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54MJ7 |
Definition |
sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum |
Align length |
189 |
Score (bit) |
169.0 |
E-value |
9.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949590|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_G08, 5' (670 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochon... 169 9e-42 sp|P34106|ALA2_PANMI Alanine aminotransferase 2 OS=Panicum milia... 161 3e-39 sp|P52894|ALA2_HORVU Alanine aminotransferase 2 OS=Hordeum vulga... 160 7e-39 sp|Q10334|ALAT_SCHPO Putative alanine aminotransferase OS=Schizo... 146 1e-34 sp|Q6NYL5|ALAT2_DANRE Alanine aminotransferase 2-like OS=Danio r... 145 2e-34 sp|P52893|ALAM_YEAST Probable alanine aminotransferase, mitochon... 142 2e-33 sp|P52892|ALAT_YEAST Probable alanine aminotransferase OS=Saccha... 140 8e-33 sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus... 137 4e-32 sp|Q28DB5|ALAT2_XENTR Alanine aminotransferase 2 OS=Xenopus trop... 133 7e-31 sp|Q6GM82|ALAT2_XENLA Alanine aminotransferase 2 OS=Xenopus laev... 133 1e-30 sp|P24298|ALAT1_HUMAN Alanine aminotransferase 1 OS=Homo sapiens... 130 8e-30 sp|Q8TD30|ALAT2_HUMAN Alanine aminotransferase 2 OS=Homo sapiens... 129 1e-29 sp|P25409|ALAT1_RAT Alanine aminotransferase 1 OS=Rattus norvegi... 129 1e-29 sp|Q8QZR5|ALAT1_MOUSE Alanine aminotransferase 1 OS=Mus musculus... 129 1e-29 sp|A4IFH5|ALAT1_BOVIN Alanine aminotransferase 1 OS=Bos taurus G... 129 1e-29 sp|P63498|AAT_MYCTU Probable aspartate aminotransferase OS=Mycob... 57 9e-08 sp|P63499|AAT_MYCBO Probable aspartate aminotransferase OS=Mycob... 57 9e-08 sp|P71348|Y286_HAEIN Uncharacterized aminotransferase HI0286 OS=... 54 7e-07 sp|P0A961|YFBQ_SHIFL Uncharacterized aminotransferase yfbQ OS=Sh... 54 1e-06 sp|P0A959|YFBQ_ECOLI Uncharacterized aminotransferase yfbQ OS=Es... 54 1e-06 sp|P0A960|YFBQ_ECOL6 Uncharacterized aminotransferase yfbQ OS=Es... 54 1e-06 sp|O87320|AATC_RHIME Putative aminotransferase aatC OS=Rhizobium... 45 5e-04 sp|Q58097|AAT2_METJA Probable aspartate aminotransferase 2 OS=Me... 44 6e-04 sp|Q9STR4|1A17_ARATH 1-aminocyclopropane-1-carboxylate synthase ... 43 0.001 sp|Q60317|AAT1_METJA Probable aspartate aminotransferase 1 OS=Me... 41 0.005 sp|Q9SAR0|1A16_ARATH 1-aminocyclopropane-1-carboxylate synthase ... 41 0.005 sp|Q3UX83|1A1L2_MOUSE 1-aminocyclopropane-1-carboxylate synthase... 40 0.009 sp|P77434|YFDZ_ECOLI Uncharacterized aminotransferase yfdZ OS=Es... 40 0.011 sp|Q10DK7|1A11_ORYSJ 1-aminocyclopropane-1-carboxylate synthase ... 39 0.019 sp|A2XLL2|1A11_ORYSI 1-aminocyclopropane-1-carboxylate synthase ... 39 0.019
>sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1 Length = 534
Score = 169 bits (429), Expect = 9e-42 Identities = 92/189 (48%), Positives = 131/189 (69%), Gaps = 13/189 (6%) Frame = +1
Query: 112 EIMAPKKVLDPDTINENIKKLVYAVRGELYIRAS----ELQK---EGKK------IIFTN 252 E M KK + D I +N++ YAVRGEL IRA +LQK EG K I++ N Sbjct: 46 EKMTHKKSMTIDNICQNVRNAQYAVRGELVIRAEAISHQLQKQKTEGTKTLPFEEIVYCN 105
Query: 253 VGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSGGLGAYS 432 +GNP L QKPLT+ RQV++L + P L+++ V+ ++PADVI+RAK L + GAYS Sbjct: 106 IGNPQQLKQKPLTYFRQVVSLVECPDLLDNPYVEKIYPADVISRAKEILGSINNTTGAYS 165
Query: 433 DSRGLPGIRQEVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQ 612 +S+G+ + + VA+F+ +RDG+ SDP IFLTDGAS GV ++L +++++++DG+L PIPQ Sbjct: 166 NSQGIGLVLRSVADFIERRDGHKSDPSEIFLTDGASVGVQRILKLLIKDRSDGILIPIPQ 225
Query: 613 YPLYSATIE 639 YPLYSATIE Sbjct: 226 YPLYSATIE 234
>sp|P34106|ALA2_PANMI Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1 Length = 482
Score = 161 bits (407), Expect = 3e-39 Identities = 81/174 (46%), Positives = 117/174 (67%), Gaps = 10/174 (5%) Frame = +1
Query: 145 DTINENIKKLVYAVRGELYIRASELQKEGK---------KIIFTNVGNPHALGQKPLTFP 297 + +N + K YAVRGE+ I A LQ++ + +I++ N+GNP +LGQ+P+TF Sbjct: 8 ENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67
Query: 298 RQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVAN 474 R+V+ALC P L+E LF AD I+RAK LS G GAYS S+G+ G+R +A Sbjct: 68 REVLALCDHPCLLEKEETKSLFSADAISRAKQILSTIPGRATGAYSHSQGIKGLRDAIAA 127
Query: 475 FLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATI 636 + RDG+P++ + IF+TDGAS GV ++ +++RN+ DG+LCPIPQYPLYSA+I Sbjct: 128 GIASRDGFPANADDIFVTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASI 181
>sp|P52894|ALA2_HORVU Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1 Length = 482
Score = 160 bits (404), Expect = 7e-39 Identities = 81/174 (46%), Positives = 118/174 (67%), Gaps = 10/174 (5%) Frame = +1
Query: 145 DTINENIKKLVYAVRGELYIRASELQKEGK---------KIIFTNVGNPHALGQKPLTFP 297 D +N + K YAVRGE+ I A LQ++ K +I++ N+GNP +LGQ+P+TF Sbjct: 8 DNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67
Query: 298 RQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVAN 474 R+V+ALC P L++ + LF AD I+RAK L+ G GAYS S+G+ G+R +A+ Sbjct: 68 REVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIKGLRDAIAS 127
Query: 475 FLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATI 636 + RDG+P++ + IFLTDGAS GV ++ +++RN+ DG+L PIPQYPLYSA+I Sbjct: 128 GIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASI 181
>sp|Q10334|ALAT_SCHPO Putative alanine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC582.08 PE=2 SV=1 Length = 505
Score = 146 bits (368), Expect = 1e-34 Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 12/179 (6%) Frame = +1
Query: 139 DPDTINENIKKLVYAVRGELYIRASELQKE---------GKKIIFTNVGNPHALGQKPLT 291 D +++N+ + K YAVRG L I A E+Q + +I++ N+GNP +GQ P+T Sbjct: 29 DLNSLNQQVFKANYAVRGALAILADEIQDDLLENPSSYPFSEIVYANIGNPQQMGQSPIT 88
Query: 292 FPRQVMALCQAPFLM---EDLNVDLLFPADVIARAKLYLSYTSGGLGAYSDSRGLPGIRQ 462 F RQV++LCQ P L+ E+ LFP DV+ R+K+ L SG LGAYS S+G+P +R+ Sbjct: 89 FVRQVLSLCQYPTLLDHAEEKWFQNLFPTDVVQRSKMLLK-ESGSLGAYSASQGIPLVRR 147
Query: 463 EVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATIE 639 VA+F+ RDG+ +P I+LT GAS ++ +I+ DGV+ P PQYPLY A I+ Sbjct: 148 HVADFIRARDGFDCEPSDIYLTSGASHAARLIMTLIIARPTDGVMVPAPQYPLYGAQID 206
>sp|Q6NYL5|ALAT2_DANRE Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2 Length = 549
Score = 145 bits (366), Expect = 2e-34 Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 20/212 (9%) Frame = +1
Query: 61 PERPYTRTRAHTDTHTEEIMAPK-------KVLDPDTINENIKKLVYAVRGELYIRASEL 219 P R ++ A H ++ M+ KVL DT+N N+KK+ YAVRG + RA ++ Sbjct: 42 PHRDFSAFPAAQSEHMQQKMSENGAIPRQGKVLTVDTMNANVKKVDYAVRGPIVQRAVQI 101
Query: 220 QKEGKK--------IIFTNVGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDLLFPADV 375 +KE K+ +I N+G+ HA+GQ+P+TF RQVMALC P L++D FP D Sbjct: 102 EKELKEGVKKPFDEVIKANIGDAHAMGQRPITFFRQVMALCTYPQLLDDNK----FPEDA 157
Query: 376 IARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVANFLLQRD-GYPSDPELIFLTDGASKGV 549 RA+ L G +GAY+ S+G+ +RQ+VA ++ +RD G PSDP+ I+LT GAS G+ Sbjct: 158 KNRARRILQSCGGNSIGAYTTSQGIDCVRQDVAKYIERRDGGIPSDPDNIYLTTGASDGI 217
Query: 550 MQLLNMIVRNK---NDGVLCPIPQYPLYSATI 636 + +L ++ + GV+ IPQYPLYSA+I Sbjct: 218 VTILKLLTAGEGLTRTGVMISIPQYPLYSASI 249
>sp|P52893|ALAM_YEAST Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1 Length = 592
Score = 142 bits (358), Expect = 2e-33 Identities = 90/204 (44%), Positives = 116/204 (56%), Gaps = 14/204 (6%) Frame = +1
Query: 67 RPYTRTRAHTDTHTEEIMAPKKVLDPDTINENIKKLVYAVRGELYIRASELQKEGKK--- 237 R R HT + P + L + +NEN+ K YAVRG + +RA EL+ + +K Sbjct: 88 RHLNRFPHHTLKTSNNEFYPAEQLTLEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQ 147
Query: 238 ------IIFTNVGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDL----LFPADVIARA 387 II N+GNP L QKPLT+ RQV++L Q P L+ L LF D I RA Sbjct: 148 SLPFDRIINANIGNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRA 207
Query: 388 KLYLSYTSGGLGAYSDSRGLPGIRQEVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLN 564 K + G +GAYS S+G+ GIR+ VA F+ +RD G S PE IFLT GAS V LL+ Sbjct: 208 KSLMEDIGGSVGAYSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLS 267
Query: 565 MIVRNKNDGVLCPIPQYPLYSATI 636 + R GVL PIPQYPLY+AT+ Sbjct: 268 IFCRGPETGVLIPIPQYPLYTATL 291
>sp|P52892|ALAT_YEAST Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1 Length = 507
Score = 140 bits (352), Expect = 8e-33 Identities = 79/175 (45%), Positives = 111/175 (63%), Gaps = 14/175 (8%) Frame = +1
Query: 151 INENIKKLVYAVRGELYIRASELQKEGKK---------IIFTNVGNPHALGQKPLTFPRQ 303 +N + K YAVRG + RA EL++E KK II N+GNP L QKPLTF RQ Sbjct: 31 LNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFTRQ 90
Query: 304 VMALCQAPFLMEDLNVDL----LFPADVIARAKLYLSYTSGGLGAYSDSRGLPGIRQEVA 471 V+A+ + P ++ + +L LF D + RA+ L+ G +GAYS S+G+PGIRQ VA Sbjct: 91 VLAILEYPEILRVGHNELASLNLFSRDALERAERLLNDIGGSIGAYSHSQGVPGIRQTVA 150
Query: 472 NFLLQRDG-YPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSAT 633 +F+ +RDG P+ PE I+LT GAS LL+++ ++ G+L PIPQYPLY+A+ Sbjct: 151 DFITRRDGGEPATPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYTAS 205
>sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1 Length = 522
Score = 137 bits (346), Expect = 4e-32 Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 12/181 (6%) Frame = +1
Query: 130 KVLDPDTINENIKKLVYAVRGELYIRASELQKEGKK--------IIFTNVGNPHALGQKP 285 ++L +++N +K + YAVRG + ++A E++ E ++ +I N+G+ HA+GQ+P Sbjct: 46 RILTLESMNPQVKAVEYAVRGPIVLKAGEIEMELQRGIKKPFTEVIRANIGDAHAMGQQP 105
Query: 286 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSGG-LGAYSDSRGLPGIRQ 462 +TF RQVMALC P L+ + FP D RA+ L G LG+YS S+G+ IR+ Sbjct: 106 ITFLRQVMALCTYPNLLNSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIRE 161
Query: 463 EVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVR---NKNDGVLCPIPQYPLYSAT 633 +VA F+ +RDG P+DP+ I+LT GAS G+ +L ++V GV+ PIPQYPLYSA Sbjct: 162 DVAAFITRRDGVPADPDNIYLTTGASDGISTILKLLVSGGGKSRTGVMIPIPQYPLYSAV 221
Query: 634 I 636 I Sbjct: 222 I 222
>sp|Q28DB5|ALAT2_XENTR Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1 Length = 524
Score = 133 bits (335), Expect = 7e-31 Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 13/182 (7%) Frame = +1
Query: 130 KVLDPDTINENIKKLVYAVRGELYIRASELQKE---GKKIIFT-----NVGNPHALGQKP 285 ++L +++N I+K+ YAVRG + IRA EL+KE G K FT N+G+ HA+GQKP Sbjct: 47 RILTLESMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKP 106
Query: 286 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQ 462 +TF RQV A+C P LM D FP DV +A L G +GAYS S+G+ IRQ Sbjct: 107 ITFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQ 162
Query: 463 EVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLNMIVRNK---NDGVLCPIPQYPLYSA 630 +VA ++ +RD G SDP I+L+ GAS ++ +L ++V + GVL PIPQYPLYSA Sbjct: 163 DVAKYIERRDGGIQSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVLIPIPQYPLYSA 222
Query: 631 TI 636 + Sbjct: 223 AL 224
>sp|Q6GM82|ALAT2_XENLA Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1 Length = 540
Score = 133 bits (334), Expect = 1e-30 Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 13/182 (7%) Frame = +1
Query: 130 KVLDPDTINENIKKLVYAVRGELYIRASELQKE---GKKIIFT-----NVGNPHALGQKP 285 ++L D++N I+K+ YAVRG + IRA EL+KE G K FT N+G+ HA+GQKP Sbjct: 63 RILTLDSMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKP 122
Query: 286 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQ 462 +TF RQV A+C P LM D FP DV +A L G +GAYS S+G+ IRQ Sbjct: 123 VTFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQ 178
Query: 463 EVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLNMIVRNK---NDGVLCPIPQYPLYSA 630 +VA ++ +RD G SDP I+L+ GAS ++ +L ++V + GV+ PIPQYPLYSA Sbjct: 179 DVAKYIERRDGGILSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVMIPIPQYPLYSA 238
Query: 631 TI 636 + Sbjct: 239 AL 240
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TEP5 |
Definition |
tr|A9TEP5|A9TEP5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
174 |
Score (bit) |
296.0 |
E-value |
1.0e-78 |
Report |
|