DK949611
Clone id TST38A01NGRL0006_H06
Library
Length 710
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_H06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GAGATCAGTAGGGTTTAGCTCCGCGATGAGGACTGCAGCTCTGCTCCGCCCTGTCTCAAG
GCTTCTTCACCGCGTTGCTGCTACAGAAAGTTTATCTAGAGAGAGCTTTGCAGAAGTAGC
AGGGAGGGCTGCAGCGATCTATGGAAGGCAAGAGAGCAGAGTAGCGATGCAACTGGGAGG
TTTGCGCGCTCTTCGGCGAGAGCCCATCTCTCAGGCGCAGGTGCAAGCAGAGATGGAAGA
AGAGGCAAAGAACATAGACCTTGCCCCGCACAAGCTCTTGCAGAAAGGTGATCCGGGCAC
TCAGCAGGCCATCATCAAGGATGTCATCCCTGTTGGGTACTTTGTCACTATGCCTAGCGG
CAAGGAGGCCTATCTTCCTGCTCAGGATCTTGGTTTCACAGGTGGGCTCGCCATACTCGA
GCGTCTTTTCAAAGTGGGTCAAGAGATCACAGTGCGTGTTGCCTCCATTGGAGGCGGAGG
GCGAGAAATTCTTTCTATCAAGAAACCGGAGCATGCGCCTCCAGAGAGGAAGTTCACTGT
CAGCACAAATACCACCAATCGCTATGGTTCTAGGTACTGATTTGGTCTTATTGATCTGCT
TGGGCATTAGCAACCTCTTTAGTAGCTCAGGTAAGTGCAACCTTTTCAGTTTATCTGCAT
TAGCTGTCATGCCCCAAATGCACATACAGGTCATCACATTTTTGGTCTCT
■■Homology search results ■■ -
sp_hit_id Q3AM38
Definition sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase OS=Synechococcus sp. (strain CC9605)
Align length 63
Score (bit) 38.1
E-value 0.047
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_H06, 5'
(710 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|Q3AV44|PNP_SYNS9 Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|Q0I8D2|PNP_SYNS3 Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|Q7U515|PNP_SYNPX Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|A5GN19|PNP_SYNPW Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|Q7VAZ5|PNP_PROMA Polyribonucleotide nucleotidyltransferase OS... 38 0.047
sp|Q46JM7|PNP_PROMT Polyribonucleotide nucleotidyltransferase OS... 37 0.11
sp|A2C412|PNP_PROM1 Polyribonucleotide nucleotidyltransferase OS... 37 0.11
sp|A2C794|PNP_PROM3 Polyribonucleotide nucleotidyltransferase OS... 37 0.14
sp|Q7V606|PNP_PROMM Polyribonucleotide nucleotidyltransferase OS... 35 0.31
sp|A2BSA7|PNP_PROMS Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|Q7V0R5|PNP_PROMP Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|Q319U4|PNP_PROM9 Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|A2BXQ9|PNP_PROM5 Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|A8G5Y9|PNP_PROM2 Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|A3PE40|PNP_PROM0 Polyribonucleotide nucleotidyltransferase OS... 35 0.40
sp|A5GRD7|PNP_SYNR3 Polyribonucleotide nucleotidyltransferase OS... 33 1.5
sp|Q54G06|XPP1_DICDI Xaa-Pro aminopeptidase 1 OS=Dictyostelium d... 32 3.4
sp|P41121|PNP_PHOLU Polyribonucleotide nucleotidyltransferase OS... 32 3.4
sp|Q5WFU8|PNP_BACSK Polyribonucleotide nucleotidyltransferase OS... 32 3.4
sp|Q819Z1|PNP_BACCR Polyribonucleotide nucleotidyltransferase OS... 32 3.4
sp|Q65N62|YDBR_BACLD DEAD-box ATP-dependent RNA helicase ydbR OS... 32 4.4
sp|P37560|YABR_BACSU Uncharacterized protein yabR OS=Bacillus su... 32 4.4
sp|Q67P77|PNP_SYMTH Polyribonucleotide nucleotidyltransferase OS... 32 4.4
sp|Q7MYZ0|PNP_PHOLL Polyribonucleotide nucleotidyltransferase OS... 32 4.4
sp|Q3Z7V6|PNP_DEHE1 Polyribonucleotide nucleotidyltransferase OS... 32 4.4
sp|Q493T3|PNP_BLOPB Polyribonucleotide nucleotidyltransferase OS... 31 5.8
sp|P43076|PHR1_CANAL pH-responsive protein 1 OS=Candida albicans... 31 5.8
sp|P32916|SRPR_YEAST Signal recognition particle receptor subuni... 31 7.6
sp|Q8DGW9|PNP_THEEB Polyribonucleotide nucleotidyltransferase OS... 31 7.6

>sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9605) GN=pnp PE=3 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q3AV44|PNP_SYNS9 Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9902) GN=pnp PE=3 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q0I8D2|PNP_SYNS3 Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9311) GN=pnp PE=3 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q7U515|PNP_SYNPX Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain WH8102) GN=pnp PE=3 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|A5GN19|PNP_SYNPW Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain WH7803) GN=pnp PE=3 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q7VAZ5|PNP_PROMA Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus GN=pnp PE=3 SV=1
Length = 722

Score = 38.1 bits (87), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q46JM7|PNP_PROMT Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus (strain NATL2A) GN=pnp PE=3
SV=1
Length = 722

Score = 37.0 bits (84), Expect = 0.11
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG ++TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDQVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|A2C412|PNP_PROM1 Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus (strain NATL1A) GN=pnp PE=3
SV=1
Length = 722

Score = 37.0 bits (84), Expect = 0.11
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG ++TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDQVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|A2C794|PNP_PROM3 Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus (strain MIT 9303) GN=pnp PE=3
SV=1
Length = 721

Score = 36.6 bits (83), Expect = 0.14
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + ++ + KVG E+TVR+ I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVDDVVKVGDEVTVRIREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>sp|Q7V606|PNP_PROMM Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus (strain MIT 9313) GN=pnp PE=3
SV=1
Length = 723

Score = 35.4 bits (80), Expect = 0.31
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + ++ + KVG ++TVR+ I GR L
Sbjct: 640 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVDDVVKVGDQVTVRIREIDNRGRINL 698

Query: 494 SIK 502
+++
Sbjct: 699 TLR 701


tr_hit_id A7PEK9
Definition tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 72
Score (bit) 39.7
E-value 0.19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_H06, 5'
(710 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genom... 40 0.19
tr|Q05WJ4|Q05WJ4_9SYNE Polyribonucleotide nucleotidyltransferase... 39 0.25
tr|A6NQP1|A6NQP1_9BACE Putative uncharacterized protein OS=Bacte... 39 0.33
tr|A3Z644|A3Z644_9SYNE Polyribonucleotide nucleotidyltransferase... 39 0.33
tr|A9RZ32|A9RZ32_PHYPA Elongation factor Ts (Fragment) OS=Physco... 39 0.33
tr|O24288|O24288_PEA Polynucleotide phosphorylase OS=Pisum sativ... 39 0.43
tr|A9BBJ7|A9BBJ7_PROM4 Polyribonucleotide nucleotidyltransferase... 38 0.57
tr|Q05YW2|Q05YW2_9SYNE RNA binding S1 OS=Synechococcus sp. BL107... 38 0.57
tr|A4CRM4|A4CRM4_SYNPV Polyribonucleotide nucleotidyltransferase... 38 0.57
tr|B1X3J9|B1X3J9_PAUCH Polyribonucleotide nucleotidyltransferase... 38 0.57
tr|B1YGQ3|B1YGQ3_EXIS2 RNA binding S1 domain protein OS=Exiguoba... 38 0.74
tr|A6E805|A6E805_9SPHI Polynucleotide phosphorylase/polyadenylas... 38 0.74
tr|A4XKP1|A4XKP1_CALS8 Hydroxymethylbutenyl pyrophosphate reduct... 37 0.97
tr|Q2IFT4|Q2IFT4_ANADE Ribosomal protein S1 OS=Anaeromyxobacter ... 37 1.3
tr|Q08WR4|Q08WR4_STIAU RNA binding S1 OS=Stigmatella aurantiaca ... 37 1.3
tr|Q2QP54|Q2QP54_ORYSJ Elongation factor Ts OS=Oryza sativa subs... 37 1.3
tr|A2ZLC1|A2ZLC1_ORYSI Elongation factor Ts OS=Oryza sativa subs... 37 1.3
tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton th... 37 1.6
tr|A8F7S1|A8F7S1_THELT RNA binding S1 domain protein OS=Thermoto... 37 1.6
tr|Q3Y178|Q3Y178_ENTFC RNA binding S1 OS=Enterococcus faecium DO... 37 1.6
tr|B7DTL3|B7DTL3_9BACL RNA binding S1 domain protein OS=Alicyclo... 37 1.6
tr|B2QDR6|B2QDR6_9BACL RNA binding S1 domain protein OS=Exiguoba... 37 1.6
tr|B4UDY4|B4UDY4_ANASK RNA binding S1 domain protein OS=Anaeromy... 36 2.2
tr|A9SG13|A9SG13_PHYPA Elongation factor Ts OS=Physcomitrella pa... 36 2.2
tr|A9SG12|A9SG12_PHYPA Predicted protein OS=Physcomitrella paten... 36 2.2
tr|A3Z0V4|A3Z0V4_9SYNE Polyribonucleotide nucleotidyltransferase... 36 2.8
tr|Q839B4|Q839B4_ENTFA S1 RNA-binding domain protein OS=Enteroco... 35 3.7
tr|B1HSW7|B1HSW7_LYSSC Hypothetical yabR protein OS=Lysinibacill... 35 3.7
tr|A7QRH7|A7QRH7_VITVI Chromosome chr8 scaffold_150, whole genom... 35 3.7
tr|Q0BTC6|Q0BTC6_GRABC Ribonuclease E OS=Granulibacter bethesden... 35 4.8

>tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016702001
PE=4 SV=1
Length = 553

Score = 39.7 bits (91), Expect = 0.19
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2

Query: 305 QAIIKDVIPVGYFVTMPSGKEAYLPAQDLGFTG-GLAILERLFKVGQEITVRVASIGGGG 481
+ +K++ G F+++P G+E +LP + G G + +VGQE++VRV I G
Sbjct: 267 EGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGFGNLMGGSSLQVGQEVSVRVLRI-SRG 325

Query: 482 REILSIKKPEHA 517
+ L++KK E A
Sbjct: 326 QVTLTMKKEEDA 337


>tr|Q05WJ4|Q05WJ4_9SYNE Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. RS9916 GN=RS9916_33752 PE=4 SV=1
Length = 721

Score = 39.3 bits (90), Expect = 0.25
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK----KPEHAPPE 526
+++ E A PE
Sbjct: 697 TLRGVPQNGEEAAPE 711


>tr|A6NQP1|A6NQP1_9BACE Putative uncharacterized protein
OS=Bacteroides capillosus ATCC 29799 GN=BACCAP_00512
PE=4 SV=1
Length = 150

Score = 38.9 bits (89), Expect = 0.33
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 335 GYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREILSIKKPEH 514
G FV++P GK + ++ ++ + + L K GQE+ V+V I GR LSIKK
Sbjct: 20 GAFVSLPEGKSGLVHISEIAYSYVNDVKDYL-KEGQEVKVKVIGIDENGRINLSIKKAMD 78

Query: 515 APP 523
PP
Sbjct: 79 PPP 81


>tr|A3Z644|A3Z644_9SYNE Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. RS9917 GN=RS9917_08821 PE=4 SV=1
Length = 691

Score = 38.9 bits (89), Expect = 0.33
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 608 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 666

Query: 494 SIK---------KPEHAP 520
+++ +PE AP
Sbjct: 667 TLRGVPQNGEDAEPEPAP 684


>tr|A9RZ32|A9RZ32_PHYPA Elongation factor Ts (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_21938 PE=3 SV=1
Length = 854

Score = 38.9 bits (89), Expect = 0.33
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPS-GKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGG 478
+K++I G F+ P G+EA+L ++ G +E L VGQE+TVRV I G
Sbjct: 158 VKNIIRNGAFIEFPEQGEEAFLRGSEVTEGGENVPIENLLTVGQEVTVRVLKIERG 213


>tr|O24288|O24288_PEA Polynucleotide phosphorylase OS=Pisum sativum
GN=pnp PE=2 SV=1
Length = 897

Score = 38.5 bits (88), Expect = 0.43
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
IK ++P G FV + G+E +L +G LA E +FKVG I V++ I G+ L
Sbjct: 767 IKSIVPYGVFVEIAPGREGLCYISELS-SGWLAKAEDVFKVGDHIDVKLTEINEKGQLRL 825

Query: 494 S 496
S
Sbjct: 826 S 826


>tr|A9BBJ7|A9BBJ7_PROM4 Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus (strain MIT 9211)
GN=P9211_12781 PE=4 SV=1
Length = 722

Score = 38.1 bits (87), Expect = 0.57
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>tr|Q05YW2|Q05YW2_9SYNE RNA binding S1 OS=Synechococcus sp. BL107
GN=BL107_09621 PE=4 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.57
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>tr|A4CRM4|A4CRM4_SYNPV Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain WH7805) GN=WH7805_13363
PE=4 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.57
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2

Query: 314 IKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGGGREIL 493
I +IP+G FV + GKE + L + +E + KVG E+TVRV I GR L
Sbjct: 638 ITRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDEVTVRVREIDNRGRINL 696

Query: 494 SIK 502
+++
Sbjct: 697 TLR 699


>tr|B1X3J9|B1X3J9_PAUCH Polyribonucleotide nucleotidyltransferase
OS=Paulinella chromatophora GN=pnp PE=4 SV=1
Length = 724

Score = 38.1 bits (87), Expect = 0.57
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2

Query: 299 TQQAIIKDVIPVGYFVTMPSGKEAYLPAQDLGFTGGLAILERLFKVGQEITVRVASIGGG 478
T Q + +IP+G FV + GKE + L + ++ + KVG ++TVRV I
Sbjct: 633 TFQGAVTRIIPIGAFVEILPGKEGMIHISQLS-ESRVEKVDDVVKVGDKVTVRVREIDNR 691

Query: 479 GREILSIK----KPEHAPPERKFTVSTN 550
GR L+++ H+ E +S+N
Sbjct: 692 GRINLTLRGVPQDNSHSTQEPIVNISSN 719