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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949612
Clone id TST38A01NGRL0006_H07
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_H07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTCACTCGACGCACACTCTCATCAAAAGCGCACTCTCTAGTGTACTTGTGAGTGTGCAGA
GCTAAGTTGGCTTTACACACATACGCGCGCGCACACACCCAAACCCGTGCATTGCCTCCC
TCAGCGTCTCCCTGCCTGTGGCCGCCATGGCTCAATCTGCCCTTCTCTCCCGCTCCTCAG
CGCTCGCTTCCTCCTTCGCCAATTTCCAGGCAGGCTCCCGTATTGCAGCGTCGCAGGCCG
GCGGCCTCTCCTTCGCTCCCCTGCATTCCTCCAGGGTTTTCCAGTCCTCTCCCTTGAAGA
CAGTTGCCCTCTTTGGCACCAAGACTCCCAAGAAGACAACTGGGTCCAAGCCTGCCCCAA
AGACGAAGGGAAAGGTTGAGGATGGCATTTTCGGGACCTCCGGTGGAATTGGCTTCACCA
AGCAAAACGAGCTCTTTGTTGGCCGAGTCGCCATGCTTGGGTTTGCGGCCTCTATTCTAG
GTGAGGCCATCACAGGAAAGGGAACTCTTGCTCAATTCGACTTCGAGACAGGGTTGCCAC
TAACTGAGACAGAGCCCCTTCTCCTCTTCTTCATTTTGTTTACATTGCTGGGTGCTATTG
GAGCTCTTGGTGACCGAGGAAAGTTTGTGGATGATCCTGCCG
■■Homology search results ■■ -
sp_hit_id Q02060
Definition sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
Align length 136
Score (bit) 84.7
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949612|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_H07, 5'
         (642 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...    85   4e-16
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...    83   1e-15
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...    83   1e-15
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...    81   5e-15
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...    80   1e-14
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...    37   0.11 
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    36   0.20 
sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=...    36   0.20 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.25 
sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3...    35   0.26 
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO...    35   0.26 
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member...    35   0.33 
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho...    34   0.57 
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara...    34   0.57 
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo...    34   0.57 
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    34   0.57 
sp|P55194|3BP1_MOUSE SH3 domain-binding protein 1 OS=Mus musculu...    34   0.57 
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN...    34   0.74 
sp|Q3AZB7|IF2_SYNS9 Translation initiation factor IF-2 OS=Synech...    34   0.74 
sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=...    34   0.74 
sp|Q75E67|ELOA1_ASHGO Elongin-A OS=Ashbya gossypii GN=ELA1 PE=3 ...    34   0.74 
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis GN=CHS...    33   0.96 
sp|P04729|GDB1_WHEAT Gamma-gliadin B-I OS=Triticum aestivum PE=2...    33   0.97 
sp|Q7SAM0|BST1_NEUCR GPI inositol-deacylase OS=Neurospora crassa...    33   0.97 
sp|Q873A1|SEC31_NEUCR Protein transport protein sec-31 OS=Neuros...    33   1.3  
sp|Q6NZN1|PPRC1_MOUSE Peroxisome proliferator-activated receptor...    33   1.3  
sp|Q0D519|FH13_ORYSJ Formin-like protein 13 OS=Oryza sativa subs...    33   1.3  
sp|Q8N693|ESX1_HUMAN Homeobox protein ESX1 OS=Homo sapiens GN=ES...    33   1.3  
sp|Q9UU99|YJX4_SCHPO Uncharacterized protein C23B6.04c OS=Schizo...    33   1.7  
sp|Q1ZXI5|Y1558_DICDI Probable serine/threonine-protein kinase D...    33   1.7  

>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 55/136 (40%), Positives = 65/136 (47%)
 Frame = +3

Query: 231 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 410
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 411 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 590
              K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +                       
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 591 XAIGALGDRGKFVDDP 638
            AIGALGDRG+FVD+P
Sbjct: 153 GAIGALGDRGRFVDEP 168



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 46/89 (51%), Positives = 51/89 (57%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDPA 641
                        AIGALGDRG+F+DDPA
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPA 170



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 47/88 (53%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKFVDDP
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDP 169



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 46/89 (51%), Positives = 50/89 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDPA 641
                        AIGAL DRGKF+DDPA
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPA 168



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 45/88 (51%), Positives = 49/88 (55%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKFVDDP
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP 159



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|P51532|SMCA4_HUMAN Probable global transcription activator
           SNF2L4 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 115 PPSASPCLWP--PWLNLPF-SPAPQRSLPPSPISRQAPVLQRRRPAASPSLP 261
           PP   P  WP  P  N    +  PQ+ +PP P  R +P      PAASP +P
Sbjct: 276 PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMP 327


>sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=1
           SV=2
          Length = 1374

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 22/54 (40%), Positives = 24/54 (44%)
 Frame = +1

Query: 112 LPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 273
           LPP      +PP    P  P+ Q  LPP PI    P  Q R P   P  PC PP
Sbjct: 72  LPPRPDFVPFPP----PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP--PCFPP 119


>sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens
           GN=HOXA3 PE=2 SV=1
          Length = 443

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +1

Query: 76  HTYARAHTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPS 255
           H  + A  +T + PPS  P L  P    P  P P ++ PP+P   Q P    + PA +P+
Sbjct: 65  HELSEACLRTLSAPPSQPPSLGEP----PLHPPPPQAAPPAP---QPPQPAPQPPAPTPA 117

Query: 256 LPCIP 270
            P  P
Sbjct: 118 APPPP 122


>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora
           paradoxa GN=ycf17 PE=3 SV=1
          Length = 49

 Score = 35.4 bits (80), Expect = 0.25
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +3

Query: 441 GRVAMLGFAASILGEAITGKGTL 509
           GR+AMLGF A++L E++TG+GTL
Sbjct: 21  GRLAMLGFIAALLTESLTGQGTL 43


>sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3
           OS=Rattus norvegicus GN=Wipf3 PE=1 SV=1
          Length = 485

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
 Frame = +1

Query: 94  HTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVL----------QRRRPA 243
           H+  R +PP  S    PP    P  P P    PP P+   +P+            +  P+
Sbjct: 160 HSSARPVPPRPSVPAPPPPTTPPPPPPPPPPPPPPPLPPASPIKAPSVSPPVPPTKGNPS 219

Query: 244 ASPS-LPCIPP 273
           A P+ +PC+PP
Sbjct: 220 AVPAPIPCVPP 230
tr_hit_id A9TJ15
Definition tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein OS=Physcomitrella patens subsp. patens
Align length 87
Score (bit) 85.1
E-value 3.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949612|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_H07, 5'
         (642 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...    85   3e-15
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...    84   6e-15
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...    84   6e-15
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...    82   2e-14
tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...    82   2e-14
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...    82   3e-14
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...    82   3e-14
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...    81   5e-14
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...    81   5e-14
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...    80   8e-14
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...    80   1e-13
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...    80   1e-13
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...    80   1e-13
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...    80   1e-13
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...    80   1e-13
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...    77   2e-13
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...    78   4e-13
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...    78   4e-13
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...    78   4e-13
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...    78   4e-13
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...    78   4e-13
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...    78   4e-13
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...    77   9e-13
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...    77   9e-13
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    76   2e-12
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...    70   1e-10
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06

>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 49/87 (56%), Positives = 50/87 (57%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD           
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDD 635
                        AIGALGDRGKFVDD
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD 171



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragment)
           OS=Medicago truncatula PE=2 SV=1
          Length = 262

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 58/131 (44%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
 Frame = +3

Query: 246 LSFAPLHS-SRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXK 422
           +SF PL S S+ F S    T+ALF                    VED            K
Sbjct: 39  VSFNPLPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPK---VEDGIFGTSRGFGFTK 95

Query: 423 QNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIG 602
           QNELFVGRVAM+GFAASILGEA+TGKG LAQ +                        AIG
Sbjct: 96  QNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIG 155

Query: 603 ALGDRGKFVDD 635
           ALGDRGKFVDD
Sbjct: 156 ALGDRGKFVDD 166



 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LGF  S++GE ITGKG LAQ +
Sbjct: 197 KSNELFVGRLAQLGFVFSLIGEIITGKGALAQLN 230


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 48/89 (53%), Positives = 51/89 (57%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDPA 641
                        AIGALGDRGKFVDDPA
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPA 170



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 46/88 (52%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKF+DDP
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDP 167



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 46/88 (52%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKF+DDP
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDP 170



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/123 (43%), Positives = 59/123 (47%)
 Frame = +3

Query: 267 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 446
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 447 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 626
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 627 VDD 635
           VDD
Sbjct: 159 VDD 161



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/123 (43%), Positives = 59/123 (47%)
 Frame = +3

Query: 267 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 446
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 447 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 626
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 627 VDD 635
           VDD
Sbjct: 159 VDD 161



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 46/88 (52%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKFVD+P
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP 172



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 46/88 (52%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRGKFVD+P
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP 172



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 272

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 45/88 (51%), Positives = 50/88 (56%)
 Frame = +3

Query: 375 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 554
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG L+Q +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAE 139

Query: 555 XXXXXXXXXXXXXAIGALGDRGKFVDDP 638
                        AIGALGDRG+FVDDP
Sbjct: 140 PLLLFFILFTLLGAIGALGDRGRFVDDP 167



 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 420 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 521
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 199 KSNELFVGRLAQLGIAFSLIGEIITGKGALAQLN 232