DK949628 |
Clone id |
TST38A01NGRL0006_I01 |
Library |
TST38 |
Length |
698 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_I01. 5' end sequence. |
Accession |
DK949628 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1359Contig1 |
Sequence |
CGTCCACTTCGATCGAGATCAGCTAAGAGTGTCAAAAAGGATTGGCCTTTTTCAGCCCTG CCTGCCCTCAATCAGCATCAGCAGCAAGATAACAAGAAGCTCTGTATGCATCAGCTCTGT ATGCATCGGTGAGCTTACGAGCATGCCTGGTGGCAACTACTTTAACTCGCTACAATCAAG ACATGGGATGATTTCCTCTGTTTCTAGCACGGGTTCTACTGCAGTCACGAAGACGGAGAC AGAGACAAAAACGGTAGAAGAAGAACCGACGGTTTCCGAGGCTTCACCTCCTCGTGAACC TGAACGGGACTTTGCAGGCACAAAGTATATTCCAATCTACGTAATGCTTCCGCTAGGTGT CATAACGGAGCAAAACACAGTGGACAACCCTGACAAAGTTTTACAAGATTTTAAAACTCT GAAGTCGGCGAAAGTGGATGGGGTTATGGTTGATTGCTGGTGGGGTCTTGTTGAGTCCGA GAAACCGCAGAATTTCAACTGGTCAGGCTATAAGCATCTCTTTTCCCTTGTGAAGGAGGC TGGCCTCAAATTACAGGTGGTGATGTCATTTCATCAATGCGGAGGAAATGTTGGCGATGA CGTANACATTCCTTTACCCAAGTGGATACTTGACATTGGCAAAAGCAATCCAGACATTTT TTTCACAGATNAGGAGGGAAGAAGAAATCCTGAATATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22585 |
Definition |
sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa |
Align length |
124 |
Score (bit) |
173.0 |
E-value |
9.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PZF6 |
Definition |
tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
136 |
Score (bit) |
208.0 |
E-value |
2.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949628|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_I01, 5' (698 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genom... 208 2e-52 tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella paten... 206 1e-51 tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subs... 202 2e-50 tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza... 202 2e-50 tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza... 202 2e-50 tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 200 6e-50 tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genom... 198 3e-49 tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thal... 193 1e-47 tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thal... 193 1e-47 tr|Q9FQ07|Q9FQ07_CALSE Beta-amylase OS=Calystegia sepium PE=2 SV=1 176 2e-42 tr|Q9ZV58|Q9ZV58_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 175 2e-42 tr|Q8L762|Q8L762_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 175 2e-42 tr|Q4U3W3|Q4U3W3_SOYBN Beta-amylase OS=Glycine max PE=3 SV=1 172 2e-41 tr|Q9AT14|Q9AT14_CASCR Beta-amylase OS=Castanea crenata PE=2 SV=1 168 3e-40 tr|B7FLJ7|B7FLJ7_MEDTR Putative uncharacterized protein OS=Medic... 168 3e-40 tr|A5C2F9|A5C2F9_VITVI Beta-amylase OS=Vitis vinifera GN=VITISV_... 168 3e-40 tr|O65258|O65258_ARATH F6N23.1 protein (Putative beta-amylase) O... 167 5e-40 tr|A7QKP8|A7QKP8_VITVI Chromosome chr2 scaffold_113, whole genom... 167 6e-40 tr|Q588Z4|Q588Z4_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyTkm... 165 2e-39 tr|Q588Z3|Q588Z3_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyDam... 165 2e-39 tr|Q45UE7|Q45UE7_SOYBN Beta-amylase OS=Glycine max PE=2 SV=1 165 2e-39 tr|Q42795|Q42795_SOYBN Beta-amylase OS=Glycine max PE=1 SV=1 165 2e-39 tr|A7PXL0|A7PXL0_VITVI Beta-amylase OS=Vitis vinifera GN=GSVIVT0... 165 3e-39 tr|Q588Z5|Q588Z5_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyKza... 163 1e-38 tr|Q588Z6|Q588Z6_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyTkm... 162 2e-38 tr|Q9SYS1|Q9SYS1_MAIZE Beta-amylase OS=Zea mays GN=Amy2 PE=3 SV=1 160 6e-38 tr|Q9SBH7|Q9SBH7_HORVU Beta-amylase OS=Hordeum vulgare GN=beta-a... 158 3e-37 tr|Q9SB23|Q9SB23_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 158 3e-37 tr|Q9FUK7|Q9FUK7_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 158 3e-37 tr|Q9FUK6|Q9FUK6_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 158 3e-37
>tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026861001 PE=3 SV=1 Length = 657
Score = 208 bits (530), Expect = 2e-52 Identities = 92/136 (67%), Positives = 112/136 (82%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PP+ ERDFAGT YIP+YVMLPLGVI+ + + +PD +L+ + LKS VDGVMVDCWWG Sbjct: 206 PPKLQERDFAGTPYIPVYVMLPLGVISMKCELVDPDGLLKQLRILKSVNVDGVMVDCWWG 265
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 +VE+ PQ +NW+GYK LF +V+E LKLQVV+SFH+CGGNVGDDV IPLP W+ +IG+S Sbjct: 266 IVEAHAPQEYNWNGYKRLFQIVRELKLKLQVVLSFHECGGNVGDDVCIPLPHWVAEIGRS 325
Query: 647 NPDIFFTDXEGRRNPE 694 NPDIFFTD EGRRNPE Sbjct: 326 NPDIFFTDREGRRNPE 341
>tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107034 PE=3 SV=1 Length = 552
Score = 206 bits (524), Expect = 1e-51 Identities = 92/131 (70%), Positives = 108/131 (82%) Frame = +2
Query: 302 ERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVESE 481 ERDF GT IPIYVMLPLG I N V NPD + Q F LK+A+VDGVMVDCWWGLVE + Sbjct: 108 ERDFTGTPNIPIYVMLPLGTIGHDNKVTNPDDLRQKFNALKTAEVDGVMVDCWWGLVEGK 167
Query: 482 KPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKSNPDIF 661 +PQ+++WSGY+ LF++V++ GLKLQVVMSFHQCGGNVGDDV IP+P+W+LDIGK NPDIF Sbjct: 168 EPQHYDWSGYRQLFTMVRDCGLKLQVVMSFHQCGGNVGDDVYIPIPQWVLDIGKDNPDIF 227
Query: 662 FTDXEGRRNPE 694 FTD G NPE Sbjct: 228 FTDKSGVVNPE 238
>tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subsp. japonica GN=OJ1003_C09.20 PE=3 SV=1 Length = 533
Score = 202 bits (513), Expect = 2e-50 Identities = 88/136 (64%), Positives = 108/136 (79%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 82 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 141
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV IPLP W+ +IG+S Sbjct: 142 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEIGRS 201
Query: 647 NPDIFFTDXEGRRNPE 694 NPDI+FTD GRRN E Sbjct: 202 NPDIYFTDRAGRRNTE 217
>tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32458 PE=4 SV=1 Length = 651
Score = 202 bits (513), Expect = 2e-50 Identities = 88/136 (64%), Positives = 108/136 (79%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 200 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 259
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV IPLP W+ +IG+S Sbjct: 260 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEIGRS 319
Query: 647 NPDIFFTDXEGRRNPE 694 NPDI+FTD GRRN E Sbjct: 320 NPDIYFTDRAGRRNTE 335
>tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029213 PE=3 SV=1 Length = 597
Score = 202 bits (513), Expect = 2e-50 Identities = 88/136 (64%), Positives = 108/136 (79%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 135 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 194
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV IPLP W+ +IG+S Sbjct: 195 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEIGRS 254
Query: 647 NPDIFFTDXEGRRNPE 694 NPDI+FTD GRRN E Sbjct: 255 NPDIYFTDRAGRRNTE 270
>tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 Length = 567
Score = 200 bits (509), Expect = 6e-50 Identities = 85/135 (62%), Positives = 109/135 (80%) Frame = +2
Query: 290 PREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGL 469 PR PERDFAGT Y+P+YVMLPLGV+ V + D+++ + LK++ VDGVMVDCWWG Sbjct: 117 PRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADELVGQLRVLKASGVDGVMVDCWWGN 176
Query: 470 VESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKSN 649 VE+ KPQ +NW+GY+ LF +++E LKLQVVMSFH+CGGNVGDD+ IPLP W+++IG+SN Sbjct: 177 VEAHKPQEYNWTGYRRLFQMIRELKLKLQVVMSFHECGGNVGDDISIPLPHWVIEIGRSN 236
Query: 650 PDIFFTDXEGRRNPE 694 PDI+FTD GRRN E Sbjct: 237 PDIYFTDRAGRRNTE 251
>tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026862001 PE=3 SV=1 Length = 547
Score = 198 bits (503), Expect = 3e-49 Identities = 89/136 (65%), Positives = 107/136 (78%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 P + ERDFAGT Y+P+YVMLPL VI + +PD ++ + LKS VDGVMVDCWWG Sbjct: 97 PLKLQERDFAGTPYVPVYVMLPLSVININCELVDPDGLVHQLRILKSINVDGVMVDCWWG 156
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 +VE+ PQ +NWSGYK LF +V + LKLQVVMSFH+CGGNVGDDV IPLP+W+ +IG+S Sbjct: 157 IVEAHTPQVYNWSGYKRLFQIVHDIQLKLQVVMSFHECGGNVGDDVHIPLPEWVREIGRS 216
Query: 647 NPDIFFTDXEGRRNPE 694 NPDIFFTD EGRRNPE Sbjct: 217 NPDIFFTDKEGRRNPE 232
>tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 691
Score = 193 bits (490), Expect = 1e-47 Identities = 82/136 (60%), Positives = 107/136 (78%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 +VE PQ +NW+GY+ LF +V++ LK+QV+MSFH+CGGNVGDDV IPLP W+ +IG++ Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEIGRT 353
Query: 647 NPDIFFTDXEGRRNPE 694 NPDI+FTD EGRRNPE Sbjct: 354 NPDIYFTDREGRRNPE 369
>tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 687
Score = 193 bits (490), Expect = 1e-47 Identities = 82/136 (60%), Positives = 107/136 (78%) Frame = +2
Query: 287 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 466 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 467 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKS 646 +VE PQ +NW+GY+ LF +V++ LK+QV+MSFH+CGGNVGDDV IPLP W+ +IG++ Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEIGRT 353
Query: 647 NPDIFFTDXEGRRNPE 694 NPDI+FTD EGRRNPE Sbjct: 354 NPDIYFTDREGRRNPE 369
>tr|Q9FQ07|Q9FQ07_CALSE Beta-amylase OS=Calystegia sepium PE=2 SV=1 Length = 498
Score = 176 bits (445), Expect = 2e-42 Identities = 74/124 (59%), Positives = 95/124 (76%) Frame = +2
Query: 326 YIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVESEKPQNFNWS 505 Y+P+YVMLPLGV+ N + DKV + K LK A DG+MVD WWG++E++ P+N++WS Sbjct: 13 YVPVYVMLPLGVVNSDNVFPDQDKVENELKQLKEAGCDGIMVDVWWGIIEAKGPKNYDWS 72
Query: 506 GYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVXIPLPKWILDIGKSNPDIFFTDXEGRR 685 YK LF LV++ GLK+Q +MSFHQCGGNVGD V IP+PKWIL IG +NPDIF+T+ G R Sbjct: 73 AYKELFQLVRKCGLKIQAIMSFHQCGGNVGDAVFIPIPKWILQIGNNNPDIFYTNKAGNR 132
Query: 686 NPEY 697 N EY Sbjct: 133 NQEY 136
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