DK949675
Clone id TST38A01NGRL0006_K02
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_K02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCGAACGTCATTCGTCTTCTTGCAAGTCATCATGCCTCGTCGAAGCGGTGGTGGAGGGCG
ATCAGGCTCTCGTCCCATGCGCAGTGCCCATCTTCCCTCACGCAGTGCACCACCTCCTGC
CCCTGTTCAACATGCACCTCCGCCGGCTCCAGTGCAAAGTAGTGGTGGCTCAATGATGGG
TGGCCTTGGGGCTACCATCGCTCAAGGGATGGCTTTTGGGACTGGAAGTGCCATTGCTCA
CCGAGCTGTTGATGGGGTGATGGGACCTAGAACCGTGACCCATGAGCATATGACTCCTGA
TGCACCTGTTTCTGCAGCTTCCCCAAATCTGACCACAGTTAGTGGGTCAGATGCGTGTGC
GAATCAGACTAAGTCCTTCCAAGATTGCGTCAATGCTTATGGCAGTGACATTGGGAAGTG
CCAATTTTACATTGATATGCTGAATGAGTGCCGCCGTGGACCGTCATCATCCATGATGCT
GTAATGATTGGACAGTATTGGGAATGAGTTCTAGGAACTTCTAATGGATGGAAAATATAT
TTTAGTTTGATGGTACAAGATCGTGTGAATGGGGTCATAGAACCGTTGGTTGGCTCCAGT
GGATTGTGATGGTGTAGTTTGTTGGTTATGACTTGGATATGAATTATTTATTTGGCTCTT
ATTGAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q10307
Definition sp|Q10307|YD52_SCHPO Uncharacterized protein C6C3.02c OS=Schizosaccharomyces pombe
Align length 107
Score (bit) 37.4
E-value 0.072
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949675|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_K02, 5'
(664 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10307|YD52_SCHPO Uncharacterized protein C6C3.02c OS=Schizos... 37 0.072
sp|A6SY30|SYT_JANMA Threonyl-tRNA synthetase OS=Janthinobacteriu... 32 3.0
sp|O83933|Y967_TREPA Uncharacterized protein TP_0967 OS=Treponem... 32 3.0
sp|P47980|TIS1_DROME Protein TIS11 OS=Drosophila melanogaster GN... 32 3.9
sp|A5GTX8|KATG_SYNR3 Catalase-peroxidase OS=Synechococcus sp. (s... 25 6.3
sp|Q91V88|NPNT_MOUSE Nephronectin OS=Mus musculus GN=Npnt PE=1 SV=1 29 6.5

>sp|Q10307|YD52_SCHPO Uncharacterized protein C6C3.02c
OS=Schizosaccharomyces pombe GN=SPAC6C3.02c PE=2 SV=1
Length = 172

Score = 37.4 bits (85), Expect = 0.072
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
Frame = +2

Query: 197 IAQGMAFGTGSAIAHRAVDGVMG----------------PRTVTHEHMTPDAPVSAASPN 328
++ G GSAI H + G P++ ++ + P+A +A P+
Sbjct: 62 VSTAAGVGIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQS-SYSNSVPEAAYGSAPPS 120

Query: 329 LTTVSG-----SDACANQTKSFQDCVNAYGSDIGKCQFYIDMLNECR 454
S +AC K F DC+N + + +C +Y++ L C+
Sbjct: 121 TFASSAISEEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165


>sp|A6SY30|SYT_JANMA Threonyl-tRNA synthetase OS=Janthinobacterium
sp. (strain Marseille) GN=thrS PE=3 SV=1
Length = 635

Score = 32.0 bits (71), Expect = 3.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3

Query: 311 KQVHQESYAHGSRF*VPSPHQQLGEQ---WHFQSQKPSLERW*PQG 183
K+ QE+Y H H++LG+Q +HFQ + P L W P+G
Sbjct: 224 KKEEQEAYLHMLEEAEKRDHRKLGKQLDFFHFQEEAPGLIFWHPKG 269


>sp|O83933|Y967_TREPA Uncharacterized protein TP_0967 OS=Treponema
pallidum GN=TP_0967 PE=3 SV=1
Length = 517

Score = 32.0 bits (71), Expect = 3.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2

Query: 224 GSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSD 352
GS + H AV G MG +T +TP AP +A++ +G+D
Sbjct: 21 GSVLWHHAVLGGMGGAALTASELTPGAPPAASARAAAQETGTD 63


>sp|P47980|TIS1_DROME Protein TIS11 OS=Drosophila melanogaster
GN=Tis11 PE=2 SV=2
Length = 436

Score = 31.6 bits (70), Expect = 3.9
Identities = 22/62 (35%), Positives = 24/62 (38%)
Frame = +2

Query: 197 IAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQTKS 376
I QGM G G + H GP T P +PV P VSGS A N S
Sbjct: 342 IGQGMIIGQGLGMGHH------GPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGS 395

Query: 377 FQ 382
Q
Sbjct: 396 KQ 397


>sp|A5GTX8|KATG_SYNR3 Catalase-peroxidase OS=Synechococcus sp.
(strain RCC307) GN=katG PE=3 SV=1
Length = 732

Score = 25.4 bits (54), Expect(2) = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2

Query: 266 PRTVTHEHMTPDA--PVSAASPNLTT 337
P+ V EHM PDA P +A P +TT
Sbjct: 346 PKDVKAEHMIPDAHVPGRSAPPMMTT 371



Score = 23.9 bits (50), Expect(2) = 6.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1

Query: 178 GWPWGYHRSRDGFWDW 225
G+ W H+S G W W
Sbjct: 329 GYEWELHQSPAGAWQW 344


>sp|Q91V88|NPNT_MOUSE Nephronectin OS=Mus musculus GN=Npnt PE=1 SV=1
Length = 561

Score = 28.9 bits (63), Expect(2) = 6.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2

Query: 302 APVSAASPNLTTVSGSDACANQTKS---FQDCVNAYGSDIGKCQFYIDML 442
+P +P+ T D CA S F+ CVN +GS I KC D++
Sbjct: 155 SPGLQLAPDGRTCVDIDECATGRVSCPRFRQCVNTFGSYICKCHTGFDLM 204



Score = 20.4 bits (41), Expect(2) = 6.5
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1

Query: 196 HRSRDGFWDWKCHC 237
HR + F +KC+C
Sbjct: 102 HRCMNTFGSYKCYC 115


tr_hit_id A9TBQ5
Definition tr|A9TBQ5|A9TBQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 91
Score (bit) 133.0
E-value 1.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949675|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_K02, 5'
(664 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TBQ5|A9TBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 133 1e-29
tr|A9NKP0|A9NKP0_PICSI Putative uncharacterized protein OS=Picea... 130 7e-29
tr|A9U335|A9U335_PHYPA Predicted protein OS=Physcomitrella paten... 129 2e-28
tr|A9NS75|A9NS75_PICSI Putative uncharacterized protein OS=Picea... 128 4e-28
tr|A9NPP6|A9NPP6_PICSI Putative uncharacterized protein OS=Picea... 128 4e-28
tr|A7QM14|A7QM14_VITVI Chromosome undetermined scaffold_123, who... 127 6e-28
tr|Q9AUL2|Q9AUL2_ORYSA Putative uncharacterized protein OSJNBb00... 124 4e-27
tr|Q7XXS3|Q7XXS3_ORYSJ Os03g0685500 protein OS=Oryza sativa subs... 124 4e-27
tr|B8APK7|B8APK7_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27
tr|A9PDV5|A9PDV5_POPTR Putative uncharacterized protein OS=Popul... 124 4e-27
tr|B6TU93|B6TU93_MAIZE p8MTCP1 OS=Zea mays PE=4 SV=1 123 1e-26
tr|B6TKB9|B6TKB9_MAIZE p8MTCP1 OS=Zea mays PE=2 SV=1 123 1e-26
tr|B6SYU7|B6SYU7_MAIZE p8MTCP1 OS=Zea mays PE=2 SV=1 123 1e-26
tr|B4FQ38|B4FQ38_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26
tr|B4FPU2|B4FPU2_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26
tr|B6TMH9|B6TMH9_MAIZE p8MTCP1 OS=Zea mays PE=2 SV=1 121 4e-26
tr|A9PAP4|A9PAP4_POPTR Putative uncharacterized protein OS=Popul... 120 8e-26
tr|A5C8U7|A5C8U7_VITVI Putative uncharacterized protein (Fragmen... 120 1e-25
tr|B6T269|B6T269_MAIZE p8MTCP1 OS=Zea mays PE=2 SV=1 119 2e-25
tr|A7NUJ9|A7NUJ9_VITVI Chromosome chr18 scaffold_1, whole genome... 119 2e-25
tr|A5BAI7|A5BAI7_VITVI Putative uncharacterized protein OS=Vitis... 119 2e-25
tr|Q9FME9|Q9FME9_ARATH Emb|CAB89373.1 OS=Arabidopsis thaliana GN... 107 5e-22
tr|A9RXK6|A9RXK6_PHYPA Predicted protein OS=Physcomitrella paten... 107 9e-22
tr|Q5YJM4|Q5YJM4_HYAOR Putative uncharacterized protein OS=Hyaci... 105 3e-21
tr|B6SJ12|B6SJ12_MAIZE p8MTCP1 OS=Zea mays PE=2 SV=1 101 4e-20
tr|Q9LXC2|Q9LXC2_ARATH Putative uncharacterized protein F17I14_2... 96 2e-18
tr|A8J0Y5|A8J0Y5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 96 2e-18
tr|B6T1P5|B6T1P5_MAIZE p8MTCP1 OS=Zea mays PE=4 SV=1 86 2e-15
tr|Q2HV96|Q2HV96_MEDTR CHCH OS=Medicago truncatula GN=MtrDRAFT_A... 74 8e-12
tr|Q2QLL3|Q2QLL3_ORYSJ Os12g0637900 protein OS=Oryza sativa subs... 68 6e-10

>tr|A9TBQ5|A9TBQ5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169185 PE=4 SV=1
Length = 142

Score = 133 bits (334), Expect = 1e-29
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQG+AFGTGSA+AHRAVD VMGPRTV HEH+ +P VS +DACANQ+
Sbjct: 48 STIAQGLAFGTGSAVAHRAVDSVMGPRTVVHEHVGGQPDSGGQAPLAQPVS-ADACANQS 106

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRRGP 463
K+FQDCVNA SDIG+CQFYIDMLNECRRGP
Sbjct: 107 KAFQDCVNANNSDIGRCQFYIDMLNECRRGP 137


>tr|A9NKP0|A9NKP0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 146

Score = 130 bits (327), Expect = 7e-29
Identities = 59/92 (64%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVS-AASPNLTTVSGSDACANQ 367
+TIAQG+AFGTGSAIAHRAVD V+GPRTV HE+ + P + S ++ + G D+C NQ
Sbjct: 50 STIAQGVAFGTGSAIAHRAVDAVVGPRTVQHEYAPAETPAAQTGSLSVANMGGMDSCTNQ 109

Query: 368 TKSFQDCVNAYGSDIGKCQFYIDMLNECRRGP 463
K+FQDC++ YGSDI KCQFY+DMLNECRRGP
Sbjct: 110 AKAFQDCISNYGSDISKCQFYVDMLNECRRGP 141


>tr|A9U335|A9U335_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155222 PE=4 SV=1
Length = 139

Score = 129 bits (324), Expect = 2e-28
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQG+AFGTGSA+A+RAVD +MGPRTV HEH+ A S P VS +DAC NQ+
Sbjct: 47 STIAQGLAFGTGSAVANRAVDSIMGPRTVVHEHI--GASESGGQPLAQPVS-ADACVNQS 103

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRRGP 463
K+FQDCVNA SDIGKCQFYIDMLNECRRGP
Sbjct: 104 KAFQDCVNANNSDIGKCQFYIDMLNECRRGP 134


>tr|A9NS75|A9NS75_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 143

Score = 128 bits (321), Expect = 4e-28
Identities = 58/92 (63%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAAS--PNLTTVSGSDACAN 364
+TIA+G+AFGTGSAIAHRAVD +GPRTV HE + +AP +A + P ++ +SG D+C N
Sbjct: 46 STIAEGVAFGTGSAIAHRAVDAFLGPRTVQHEVVQAEAPAAAQTSMPAMSNLSGKDSCGN 105

Query: 365 QTKSFQDCVNAYGSDIGKCQFYIDMLNECRRG 460
+K+FQ+C+ YGSDIGKCQFY+DMLNECRRG
Sbjct: 106 HSKAFQECLTNYGSDIGKCQFYLDMLNECRRG 137


>tr|A9NPP6|A9NPP6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 143

Score = 128 bits (321), Expect = 4e-28
Identities = 58/92 (63%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAAS--PNLTTVSGSDACAN 364
+TIA+G+AFGTGSAIAHRAVD +GPRTV HE + +AP +A + P ++ +SG D+C N
Sbjct: 46 STIAEGVAFGTGSAIAHRAVDAFLGPRTVQHEVVQAEAPAAAQTSMPAMSNLSGKDSCGN 105

Query: 365 QTKSFQDCVNAYGSDIGKCQFYIDMLNECRRG 460
+K+FQ+C+ YGSDIGKCQFY+DMLNECRRG
Sbjct: 106 HSKAFQECLTNYGSDIGKCQFYLDMLNECRRG 137


>tr|A7QM14|A7QM14_VITVI Chromosome undetermined scaffold_123, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00001871001 PE=4 SV=1
Length = 145

Score = 127 bits (319), Expect = 6e-28
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
ATIAQGMAFGTGSA+AHRAVD VMGPRT+ HE + +A S+A P + V GSDAC +
Sbjct: 50 ATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVASEAAASSA-PTMNNVGGSDACNAHS 108

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRR 457
K+FQDC+N+ GSDI KCQFY+DML+ECRR
Sbjct: 109 KAFQDCLNSSGSDISKCQFYMDMLSECRR 137


>tr|Q9AUL2|Q9AUL2_ORYSA Putative uncharacterized protein
OSJNBb0072E24.9 OS=Oryza sativa GN=OSJNBb0072E24.9 PE=4
SV=1
Length = 138

Score = 124 bits (312), Expect = 4e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQGMAFGTGSA+AHRAVD VMGPRT+ HE + +A SA + + SD+C+ +
Sbjct: 47 STIAQGMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASATP--MANATPSDSCSIHS 104

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRRG 460
K+FQDC+N YGSDI KCQFY+DMLNECRRG
Sbjct: 105 KAFQDCINNYGSDISKCQFYLDMLNECRRG 134


>tr|Q7XXS3|Q7XXS3_ORYSJ Os03g0685500 protein OS=Oryza sativa subsp.
japonica GN=Os03g0685500 PE=2 SV=1
Length = 138

Score = 124 bits (312), Expect = 4e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQGMAFGTGSA+AHRAVD VMGPRT+ HE + +A SA + + SD+C+ +
Sbjct: 47 STIAQGMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASATP--MANATPSDSCSIHS 104

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRRG 460
K+FQDC+N YGSDI KCQFY+DMLNECRRG
Sbjct: 105 KAFQDCINNYGSDISKCQFYLDMLNECRRG 134


>tr|B8APK7|B8APK7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13062 PE=4 SV=1
Length = 126

Score = 124 bits (312), Expect = 4e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQGMAFGTGSA+AHRAVD VMGPRT+ HE + +A SA + + SD+C+ +
Sbjct: 35 STIAQGMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASATP--MANATPSDSCSIHS 92

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRRG 460
K+FQDC+N YGSDI KCQFY+DMLNECRRG
Sbjct: 93 KAFQDCINNYGSDISKCQFYLDMLNECRRG 122


>tr|A9PDV5|A9PDV5_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 146

Score = 124 bits (312), Expect = 4e-27
Identities = 57/89 (64%), Positives = 73/89 (82%)
Frame = +2

Query: 191 ATIAQGMAFGTGSAIAHRAVDGVMGPRTVTHEHMTPDAPVSAASPNLTTVSGSDACANQT 370
+TIAQGMAFGTGSA+AHRAVD VMGPRT+ HE + +A +AA+P +++ G+DAC T
Sbjct: 51 STIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVVSEA-AAAAAPTASSMGGADACNIHT 109

Query: 371 KSFQDCVNAYGSDIGKCQFYIDMLNECRR 457
K+FQDCVN +G+DI KCQFY+DML ECR+
Sbjct: 110 KAFQDCVNNFGNDISKCQFYMDMLTECRK 138