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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949691
Clone id TST38A01NGRL0006_K19
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_K19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAGGCCCA
CTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCGCGTGA
GCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGC
CGCCTTTGACAAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAGGGCTGGA
CCCCCTGCATTGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCATGGCAGCG
GCTACTACGATGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGCCAAGATG
CCGCCGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTACCCCGAAGCCTTCATCC
GCGTGCTGGGCTTTGACGCCNAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGC
CCTCTGTCTAGAAATCAATGATTTATCCTCGGAGACAACGACNATGCGTTCGTAGCCCTT
TTTTCTCTCAAGGAGACCTTGTGAACATACACTTTTGTAACGATGAGGCACATCACCAAA
TTTTAATTCATCTCTNTTAAGAGCCTTGTTTCTGTATTCGCCGCCCAAGTCTGTGCG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 158
Score (bit) 185.0
E-value 2.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949691|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_K19, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   185   2e-46
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   181   3e-45
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   181   4e-45
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   179   8e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   179   8e-45
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   179   8e-45
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   179   1e-44
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   179   1e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   179   1e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   179   1e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   179   1e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   178   2e-44
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   177   4e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   177   5e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   176   7e-44
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   176   7e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   176   7e-44
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   176   1e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   176   1e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   176   1e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   175   2e-43
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   175   2e-43
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   174   3e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  185 bits (469), Expect = 2e-46
 Identities = 88/158 (55%), Positives = 110/158 (69%), Gaps = 6/158 (3%)
 Frame = +2

Query: 11  SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLT 175
           SL+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPL+
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLS 79

Query: 176 SEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 352
            E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A 
Sbjct: 80  DEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQ 139

Query: 353 VLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 466
           V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 140 VMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  181 bits (459), Expect = 3e-45
 Identities = 79/127 (62%), Positives = 96/127 (75%)
 Frame = +2

Query: 86  SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 265
           SNG RV  M VW P   KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 266 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 445
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ  
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 446 GFLVQKP 466
            FL  KP
Sbjct: 169 SFLTYKP 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  181 bits (458), Expect = 4e-45
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 5/161 (3%)
 Frame = +2

Query: 2   PAES-LSKSFSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLP 166
           PA+S +   F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLP
Sbjct: 17  PAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76

Query: 167 PLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 346
           PL+ E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA
Sbjct: 77  PLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDA 136

Query: 347 AAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           + V+ E+ E  K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 137 SQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  179 bits (455), Expect = 8e-45
 Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 4/158 (2%)
 Frame = +2

Query: 11  SLSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSE 181
           +L+  F+GL+ +      K  N ++   SNGSRV+ M VW P   KKFETLSYLPPLT E
Sbjct: 20  NLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDE 79

Query: 182 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 358
           Q+ K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL
Sbjct: 80  QLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVL 139

Query: 359 REIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPSV 472
           +E+AEC  EYPEAFIR++GFD  RQVQ   F+   P V
Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  179 bits (455), Expect = 8e-45
 Identities = 87/152 (57%), Positives = 105/152 (69%), Gaps = 4/152 (2%)
 Frame = +2

Query: 26  FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 193
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 194 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 373
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 374 CAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
             K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  179 bits (455), Expect = 8e-45
 Identities = 89/162 (54%), Positives = 110/162 (67%), Gaps = 6/162 (3%)
 Frame = +2

Query: 2   PAES-LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYL 163
           PA+S +   F+GLR     P T  A K+ + L  SNG +VS M VW P   KKFETLSYL
Sbjct: 17  PAQSNMVAPFNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYL 75

Query: 164 PPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 343
           PPL+ E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC D
Sbjct: 76  PPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTD 135

Query: 344 AAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           A+ V+ E+ E  K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 136 ASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  179 bits (454), Expect = 1e-44
 Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 8/162 (4%)
 Frame = +2

Query: 5   AESLSKSFSGLRPTTL--AAPKSANPLS------ISNGSRVSAMLVWKPYDNKKFETLSY 160
           A ++  +F+GL+ T    ++ K +N  +       SNG RV  M VW P+ N KFETLSY
Sbjct: 9   AATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSY 68

Query: 161 LPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 340
           LP LT EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC 
Sbjct: 69  LPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCT 128

Query: 341 DAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 466
           +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 129 EASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  179 bits (454), Expect = 1e-44
 Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 8/155 (5%)
 Frame = +2

Query: 26  FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 184
           F+GL+     PTT    K AN  S   SNG RV  M VW P   KK+ETLSYLPPLT  Q
Sbjct: 25  FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80

Query: 185 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 361
           +AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++
Sbjct: 81  LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140

Query: 362 EIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 466
           E+AEC KEYP+A+IR++GFD  RQVQ   F+  +P
Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  179 bits (454), Expect = 1e-44
 Identities = 84/152 (55%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
 Frame = +2

Query: 26  FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 193
           F+GL+ +    A  K+ N ++   SNG RV+ M VW P   KKFETLSYLP LT  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 194 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 466
           EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  179 bits (453), Expect = 1e-44
 Identities = 79/127 (62%), Positives = 97/127 (76%)
 Frame = +2

Query: 86  SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 265
           SNGSRV  M VW PY NKKFETLSYLP LT EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 266 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 445
            + +  GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 446 GFLVQKP 466
            F+V KP
Sbjct: 180 SFIVHKP 186
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 155
Score (bit) 288.0
E-value 3.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949691|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_K19, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   288   3e-76
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   201   4e-50
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   199   9e-50
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   198   3e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   197   6e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   192   1e-47
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   192   1e-47
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   187   5e-46
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   186   8e-46
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   186   1e-45
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   186   1e-45
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   183   7e-45
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   181   4e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   181   4e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   180   7e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   180   7e-44
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   180   7e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   179   1e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   179   2e-43
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   178   2e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  288 bits (736), Expect = 3e-76
 Identities = 134/155 (86%), Positives = 146/155 (94%)
 Frame = +2

Query: 5   AESLSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 184
           AESLSKSFSGL+  TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++Q
Sbjct: 19  AESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQ 78

Query: 185 IAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLRE 364
           IAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLRE
Sbjct: 79  IAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLRE 138

Query: 365 IAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           IAECAKEYP AFIRVLGFDA RQVQV+GFLV+KPS
Sbjct: 139 IAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  201 bits (510), Expect = 4e-50
 Identities = 94/153 (61%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
 Frame = +2

Query: 20  KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 199
           K FSGL+ TTL+A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 200 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EC + +P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  199 bits (507), Expect = 9e-50
 Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +2

Query: 20  KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 199
           K FSGL+ TTL A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 200 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EC + +P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  198 bits (503), Expect = 3e-49
 Identities = 94/160 (58%), Positives = 118/160 (73%), Gaps = 4/160 (2%)
 Frame = +2

Query: 2   PAESLS-KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 178
           P+ES S K+FSGL+  TL + K+    S+ NGSRV  M VW P    KFET SYLPPLT 
Sbjct: 55  PSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTD 114

Query: 179 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 349
           +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 115 DQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 174

Query: 350 AVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
            VLREI EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 175 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  197 bits (500), Expect = 6e-49
 Identities = 90/153 (58%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
 Frame = +2

Query: 20  KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 199
           K+FSGL+P TL + K+    ++ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 200 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  192 bits (489), Expect = 1e-47
 Identities = 89/153 (58%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
 Frame = +2

Query: 20  KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 199
           K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPL+ +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 200 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EC   YP  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  192 bits (489), Expect = 1e-47
 Identities = 88/153 (57%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +2

Query: 20  KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 199
           K+FSGL+  TL + ++    S+ NGSRV  M VW P    KFET SYLPPLT ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 200 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 370
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 371 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  187 bits (475), Expect = 5e-46
 Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 7/162 (4%)
 Frame = +2

Query: 2   PAE-SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYL 163
           PA+ SL+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYL
Sbjct: 17  PAQASLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYL 75

Query: 164 PPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 340
           PPL+ E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC 
Sbjct: 76  PPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 341 DAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 466
           D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  186 bits (473), Expect = 8e-46
 Identities = 89/161 (55%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
 Frame = +2

Query: 2   PAESLS-----KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLP 166
           PA S S     K+FSGL+  T+ + K+ N  S+ NGSRV  M VW P    KFET SYLP
Sbjct: 21  PAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLP 80

Query: 167 PLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 346
           PL+ + IAKQV++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+
Sbjct: 81  PLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDS 140

Query: 347 AAVLREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           A VLREI EC K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 141 AQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  186 bits (472), Expect = 1e-45
 Identities = 89/156 (57%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
 Frame = +2

Query: 5   AESLS-KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSE 181
           +ES S K+FSGL+ +TL + K+ +  S+ NGSRV  M VW P    KFET SYLPPL+ +
Sbjct: 26  SESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDD 85

Query: 182 QIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 361
            IAKQVD+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLR
Sbjct: 86  AIAKQVDYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLR 145

Query: 362 EIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 469
           EI EC K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 146 EIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181