DK949707 |
Clone id |
TST38A01NGRL0006_L11 |
Library |
TST38 |
Length |
692 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_L11. 5' end sequence. |
Accession |
DK949707 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1359Contig1 |
Sequence |
CACACTTGCTGCTACTCACACCCACTTCCATGCTGCTGCTTCGCTCTCGTCCACTTCGAT CGAGCTCCATTAAACCCCTTCCCAAATGGCAGCCGTAGCTTTGAACATACCAAACCCTAA TGTTGGGCCTGCAGATCAGCTAAGAGTGTCAAAAAGGATTGGCCTTTTTCAGCCCTGCCT GCCCTCAATCAGCATCAGCAGCAAGATAACAAGAAGCTCTGTATGCATCAGCTCTGTATG CATCGGTGAGCTTACGAGCATGCCTGGTGGCAACTACTTTAACTCGCTACAATCAAGACA TGGGATGATTTCCTCTGTTTCTAGCACGGGTTCTACTGCAGTCACGAAGACGGAGACAGA GACAAAAACGGTAGAAGAAGAACCGACGGTTTCCGAGGCTTCACCTCCTCGTGAACCTGA ACGGGACTTTGCAGGCACAAAGTATATTCCAATCTACGTAATGCTTCCGCTAGGTGTCAT AACGGAGCAAAACACAGTGGACAACCCTGACAAAGTTTTACAAGATTTTAAAACTCTGAA GTCGGCGAAAGTGGATGGGGTTATGGTTGATTGCTGGTGGGGTCTTGTTGAGTCCGAGAA ACCGCAGAATTTCAACTGGTCAGGCTATAAGCATCTCTNTTCCCTTGTGAAGGANGCTGG CCTCAAATTACAGGTGGTGATGTCATTTCATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65015 |
Definition |
sp|O65015|AMYB_TRIRP Beta-amylase OS=Trifolium repens |
Align length |
83 |
Score (bit) |
104.0 |
E-value |
5.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SUV8 |
Definition |
tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
91 |
Score (bit) |
133.0 |
E-value |
1.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949707|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_L11, 5' (692 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella paten... 133 1e-29 tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subs... 130 8e-29 tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza... 130 8e-29 tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genom... 130 8e-29 tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza... 130 8e-29 tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 128 4e-28 tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genom... 120 6e-26 tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thal... 118 3e-25 tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thal... 118 3e-25 tr|A7QKP8|A7QKP8_VITVI Chromosome chr2 scaffold_113, whole genom... 108 4e-22 tr|Q9ZV58|Q9ZV58_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 107 5e-22 tr|Q9FQ07|Q9FQ07_CALSE Beta-amylase OS=Calystegia sepium PE=2 SV=1 107 5e-22 tr|Q8L762|Q8L762_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 107 5e-22 tr|B7FLJ7|B7FLJ7_MEDTR Putative uncharacterized protein OS=Medic... 103 1e-20 tr|Q9AT14|Q9AT14_CASCR Beta-amylase OS=Castanea crenata PE=2 SV=1 102 2e-20 tr|Q9FH80|Q9FH80_ARATH Beta-amylase-like (At5g45300) OS=Arabidop... 102 2e-20 tr|Q2V314|Q2V314_ARATH Uncharacterized protein At5g45300.2 OS=Ar... 102 2e-20 tr|Q4U3W3|Q4U3W3_SOYBN Beta-amylase OS=Glycine max PE=3 SV=1 101 4e-20 tr|A7PXL0|A7PXL0_VITVI Beta-amylase OS=Vitis vinifera GN=GSVIVT0... 101 5e-20 tr|A5C2F9|A5C2F9_VITVI Beta-amylase OS=Vitis vinifera GN=VITISV_... 101 5e-20 tr|O65258|O65258_ARATH F6N23.1 protein (Putative beta-amylase) O... 100 1e-19 tr|Q588Z5|Q588Z5_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyKza... 98 6e-19 tr|Q588Z4|Q588Z4_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyTkm... 98 6e-19 tr|Q588Z3|Q588Z3_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyDam... 98 6e-19 tr|Q45UE7|Q45UE7_SOYBN Beta-amylase OS=Glycine max PE=2 SV=1 98 6e-19 tr|Q42795|Q42795_SOYBN Beta-amylase OS=Glycine max PE=1 SV=1 98 6e-19 tr|A2X0H4|A2X0H4_ORYSI Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|Q3EA19|Q3EA19_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 97 1e-18 tr|Q0WWJ7|Q0WWJ7_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 97 1e-18 tr|Q08335|Q08335_SECCE Beta-amylase OS=Secale cereale PE=2 SV=1 96 2e-18
>tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107034 PE=3 SV=1 Length = 552
Score = 133 bits (334), Expect = 1e-29 Identities = 60/91 (65%), Positives = 72/91 (79%) Frame = +2
Query: 419 ERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVESE 598 ERDF GT IPIYVMLPLG I N V NPD + Q F LK+A+VDGVMVDCWWGLVE + Sbjct: 108 ERDFTGTPNIPIYVMLPLGTIGHDNKVTNPDDLRQKFNALKTAEVDGVMVDCWWGLVEGK 167
Query: 599 KPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 +PQ+++WSGY+ L ++V+ GLKLQVVMSFH Sbjct: 168 EPQHYDWSGYRQLFTMVRDCGLKLQVVMSFH 198
>tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subsp. japonica GN=OJ1003_C09.20 PE=3 SV=1 Length = 533
Score = 130 bits (327), Expect = 8e-29 Identities = 57/96 (59%), Positives = 72/96 (75%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 82 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 141
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 VE+ +PQ +NW+GYK L +++ LKLQVVMSFH Sbjct: 142 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFH 177
>tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32458 PE=4 SV=1 Length = 651
Score = 130 bits (327), Expect = 8e-29 Identities = 57/96 (59%), Positives = 72/96 (75%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 200 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 259
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 VE+ +PQ +NW+GYK L +++ LKLQVVMSFH Sbjct: 260 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFH 295
>tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026861001 PE=3 SV=1 Length = 657
Score = 130 bits (327), Expect = 8e-29 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PP+ ERDFAGT YIP+YVMLPLGVI+ + + +PD +L+ + LKS VDGVMVDCWWG Sbjct: 206 PPKLQERDFAGTPYIPVYVMLPLGVISMKCELVDPDGLLKQLRILKSVNVDGVMVDCWWG 265
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 +VE+ PQ +NW+GYK L +V+ LKLQVV+SFH Sbjct: 266 IVEAHAPQEYNWNGYKRLFQIVRELKLKLQVVLSFH 301
>tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029213 PE=3 SV=1 Length = 597
Score = 130 bits (327), Expect = 8e-29 Identities = 57/96 (59%), Positives = 72/96 (75%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 135 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 194
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 VE+ +PQ +NW+GYK L +++ LKLQVVMSFH Sbjct: 195 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFH 230
>tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 Length = 567
Score = 128 bits (321), Expect = 4e-28 Identities = 55/95 (57%), Positives = 72/95 (75%) Frame = +2
Query: 407 PREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGL 586 PR PERDFAGT Y+P+YVMLPLGV+ V + D+++ + LK++ VDGVMVDCWWG Sbjct: 117 PRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADELVGQLRVLKASGVDGVMVDCWWGN 176
Query: 587 VESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 VE+ KPQ +NW+GY+ L +++ LKLQVVMSFH Sbjct: 177 VEAHKPQEYNWTGYRRLFQMIRELKLKLQVVMSFH 211
>tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026862001 PE=3 SV=1 Length = 547
Score = 120 bits (302), Expect = 6e-26 Identities = 56/96 (58%), Positives = 68/96 (70%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 P + ERDFAGT Y+P+YVMLPL VI + +PD ++ + LKS VDGVMVDCWWG Sbjct: 97 PLKLQERDFAGTPYVPVYVMLPLSVININCELVDPDGLVHQLRILKSINVDGVMVDCWWG 156
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 +VE+ PQ +NWSGYK L +V LKLQVVMSFH Sbjct: 157 IVEAHTPQVYNWSGYKRLFQIVHDIQLKLQVVMSFH 192
>tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 691
Score = 118 bits (296), Expect = 3e-25 Identities = 51/96 (53%), Positives = 69/96 (71%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 +VE PQ +NW+GY+ L +V+ LK+QV+MSFH Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFH 329
>tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 687
Score = 118 bits (296), Expect = 3e-25 Identities = 51/96 (53%), Positives = 69/96 (71%) Frame = +2
Query: 404 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 583 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 584 LVESEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 +VE PQ +NW+GY+ L +V+ LK+QV+MSFH Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFH 329
>tr|A7QKP8|A7QKP8_VITVI Chromosome chr2 scaffold_113, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001210001 PE=3 SV=1 Length = 574
Score = 108 bits (269), Expect = 4e-22 Identities = 47/93 (50%), Positives = 63/93 (67%) Frame = +2
Query: 413 EPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVE 592 E E DF GT Y+P+YVML GVI + +PD + Q+ +KS DGV+VDCWWG+VE Sbjct: 134 EHENDFTGTPYVPVYVMLATGVINNFCQLVDPDGIRQELSHMKSLHTDGVVVDCWWGIVE 193
Query: 593 SEKPQNFNWSGYKHLXSLVKXAGLKLQVVMSFH 691 PQ + WSGY+ L ++++ LKLQVVM+FH Sbjct: 194 GWSPQKYEWSGYRELFNIIREFKLKLQVVMAFH 226
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