DK949709 |
Clone id |
TST38A01NGRL0006_L13 |
Library |
TST38 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_L13. 5' end sequence. |
Accession |
DK949709 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL142Contig1 |
Sequence |
TGGAAGATGAATACAGGAGTGACATTTATGGTGAAAGAGGTATTTTGCTTGGTGCTGTAC ATGGGCTGGTTGAGGCGCTGTTTAGACGATACACCGAGGCAGGTATGCCTGAAGAGGATG CCTACAAGAACACGGTAGAAGGCATTACAGGTGTTATATCAAAGACAATCTCCACAAAGG GAATGCTGGCTGTGTACAACTCTTTAGATGAGCAAGGGAAGAAAGATTTTGAGATTGCCT ACAGTTCCTCATATTACCCCTGCATGGACATCCTTTATGAATGTTACGAGGATGTGGCTT CAGGAAATGAGATTCGCAGTGTGGTTATGGCCGGCCGCCGCTTTCAGGAAAAAGAGGGGC TTCCTGCTTTTCCGATGGGCAAGATTGACAAGACACGGATGTGGAAGGTGGGAGAGCGAG TGCGGGCTGTGCGGCCAGAGGGTGACCTTGGTCCTTTGTATGGGTTCACAGCTGGAGTTT ACATTGCTCTCATGATGGCTCAAATTGAGGTCTTAAGGAAGAAAGGTCATTCTTACTCTG AGATGGTTAATGAGAGTGTCATCGAGGCTGTGGATTCATTGAATCCTTTTATGCATGCTC GTGGTGTGGCCTTCATGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q01292 |
Definition |
sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea |
Align length |
205 |
Score (bit) |
361.0 |
E-value |
2.0e-99 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949709|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_L13, 5' (619 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic ... 361 2e-99 sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS... 355 1e-97 sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic ... 353 4e-97 sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial ... 67 1e-10 sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial ... 64 5e-10 sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitoc... 59 2e-08 sp|A6Q461|ILVC_NITSB Ketol-acid reductoisomerase OS=Nitratirupto... 47 1e-04 sp|Q7M851|ILVC_WOLSU Ketol-acid reductoisomerase OS=Wolinella su... 43 0.001 sp|Q7VGW6|ILVC_HELHP Ketol-acid reductoisomerase OS=Helicobacter... 43 0.001 sp|Q5SJ03|ILVC_THET8 Ketol-acid reductoisomerase OS=Thermus ther... 42 0.002 sp|Q72JC8|ILVC_THET2 Ketol-acid reductoisomerase OS=Thermus ther... 42 0.002 sp|Q21T70|ILVC_RHOFD Ketol-acid reductoisomerase OS=Rhodoferax f... 41 0.006 sp|Q2S0M9|ILVC_SALRD Ketol-acid reductoisomerase OS=Salinibacter... 40 0.010 sp|Q3B594|ILVC_PELLD Ketol-acid reductoisomerase OS=Pelodictyon ... 39 0.016 sp|A0B5E0|ILVC_METTP Ketol-acid reductoisomerase OS=Methanosaeta... 39 0.016 sp|Q8KER7|ILVC_CHLTE Ketol-acid reductoisomerase OS=Chlorobium t... 39 0.021 sp|A6LPX8|ILVC_CLOB8 Ketol-acid reductoisomerase OS=Clostridium ... 39 0.028 sp|Q971A9|ILVC_SULTO Ketol-acid reductoisomerase OS=Sulfolobus t... 38 0.037 sp|Q4L7T9|ILVC_STAHJ Ketol-acid reductoisomerase OS=Staphylococc... 38 0.037 sp|A1WUW3|ILVC_HALHL Ketol-acid reductoisomerase OS=Halorhodospi... 38 0.037 sp|Q9RU74|ILVC_DEIRA Ketol-acid reductoisomerase OS=Deinococcus ... 38 0.037 sp|Q1J0T2|ILVC_DEIGD Ketol-acid reductoisomerase OS=Deinococcus ... 38 0.037 sp|Q30T61|ILVC_SULDN Ketol-acid reductoisomerase OS=Sulfurimonas... 38 0.048 sp|Q9F7L6|ILVC_PRB01 Ketol-acid reductoisomerase OS=Gamma-proteo... 38 0.048 sp|P65149|ILVC_MYCTU Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048 sp|A5U713|ILVC_MYCTA Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048 sp|Q73VH7|ILVC_MYCPA Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048 sp|O33114|ILVC_MYCLE Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048 sp|A1KMZ6|ILVC_MYCBP Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048 sp|P65150|ILVC_MYCBO Ketol-acid reductoisomerase OS=Mycobacteriu... 38 0.048
>sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1 Length = 595
Score = 361 bits (926), Expect = 2e-99 Identities = 175/205 (85%), Positives = 194/205 (94%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 E EY+SDI+GERGILLGAVHG+VE LFRRYTE+GM E+ AYKNTVE ITGVISKTISTKG Sbjct: 309 EQEYKSDIFGERGILLGAVHGIVECLFRRYTESGMSEDLAYKNTVECITGVISKTISTKG 368
Query: 183 MLAVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGL 362 MLA+YNSL E+GKKDF+ AYS+SYYP MDILYECYEDVASG+EIRSVV+AGRRF EKEGL Sbjct: 369 MLALYNSLSEEGKKDFQAAYSASYYPSMDILYECYEDVASGSEIRSVVLAGRRFYEKEGL 428
Query: 363 PAFPMGKIDKTRMWKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSE 542 PAFPMGKID+TRMWKVGE+VR+VRP GDLGPLY FTAGVY+ALMMAQIE+LRKKGHSYSE Sbjct: 429 PAFPMGKIDQTRMWKVGEKVRSVRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSE 488
Query: 543 MVNESVIEAVDSLNPFMHARGVAFM 617 ++NESVIEAVDSLNPFMHARGV+FM Sbjct: 489 IINESVIEAVDSLNPFMHARGVSFM 513
>sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1 Length = 581
Score = 355 bits (911), Expect = 1e-97 Identities = 171/205 (83%), Positives = 193/205 (94%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 E EY+SDI+GERGILLGAVHG+VE+LFRRYTE GM E+ AYKNTVE ITGVISKTIST+G Sbjct: 293 EQEYKSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVESITGVISKTISTQG 352
Query: 183 MLAVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGL 362 MLAVYN+L E GKK+FE AYS+S+YPCM+ILYECYEDVASG+EIRSVV+AGRRF EKEGL Sbjct: 353 MLAVYNALSEDGKKEFEKAYSASFYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGL 412
Query: 363 PAFPMGKIDKTRMWKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSE 542 PAFPMGKID+TRMWKVGERVR+ RP GDLGPLY FTAGV++A+MMAQIEVLRKKGHSYSE Sbjct: 413 PAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLYPFTAGVFVAMMMAQIEVLRKKGHSYSE 472
Query: 543 MVNESVIEAVDSLNPFMHARGVAFM 617 ++NESVIE+VDSLNPFMHARGV+FM Sbjct: 473 IINESVIESVDSLNPFMHARGVSFM 497
>sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2 Length = 591
Score = 353 bits (906), Expect = 4e-97 Identities = 171/205 (83%), Positives = 190/205 (92%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 E EYRSDI+GERGILLGAVHG+VE+LFRRYTE GM E+ AYKNTVE ITG IS+TIST+G Sbjct: 303 EQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVECITGTISRTISTQG 362
Query: 183 MLAVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGL 362 MLAVYNSL E+GKKDFE AYS+S+YPCM+ILYECYEDV SG+EIRSVV+AGRRF EKEGL Sbjct: 363 MLAVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQSGSEIRSVVLAGRRFYEKEGL 422
Query: 363 PAFPMGKIDKTRMWKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSE 542 PAFPMG ID+TRMWKVGERVR RP GDLGPLY FTAGVY+ALMMAQIE+LRKKGHSYSE Sbjct: 423 PAFPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSE 482
Query: 543 MVNESVIEAVDSLNPFMHARGVAFM 617 ++NESVIE+VDSLNPFMHARGV+FM Sbjct: 483 IINESVIESVDSLNPFMHARGVSFM 507
>sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV5 PE=1 SV=1 Length = 395
Score = 66.6 bits (161), Expect = 1e-10 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 3/149 (2%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 E E SD+YGERG L+G +HG+ A + E G +A+ TVE T + I G Sbjct: 249 EREVNSDLYGERGCLMGGIHGMFLAQYDVLRENGHSPSEAFNETVEEATQSLYPLIGKYG 308
Query: 183 MLAVYNSLD---EQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEK 353 M +Y++ +G D+ + ++ P + + YE +G E + + + + Sbjct: 309 MDYMYDACSTTARRGALDWYPIFKNALKP---VFQDLYESTKNGTETKRSLEFNSQPDYR 365
Query: 354 EGLPAFPMGKIDKTRMWKVGERVRAVRPE 440 E L + I +WKVG+ VR +RPE Sbjct: 366 EKLEK-ELDTIRNMEIWKVGKEVRKLRPE 393
Score = 42.7 bits (99), Expect = 0.001 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = +3
Query: 441 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFM 617 G+ G L G G+++A Q +VLR+ GHS SE NE+V EA SL P + G+ +M Sbjct: 258 GERGCLMGGIHGMFLA----QYDVLRENGHSPSEAFNETVEEATQSLYPLIGKYGMDYM 312
>sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial OS=Neurospora crassa GN=ilv-2 PE=3 SV=2 Length = 402
Score = 64.3 bits (155), Expect = 5e-10 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 E E SD+YGERG L+G +HG+ A + E G +A+ TVE T + I G Sbjct: 255 EKEVYSDLYGERGCLMGGIHGMFLAQYEVLRERGHSPSEAFNETVEEATQSLYPLIGAHG 314
Query: 183 MLAVYNSLD---EQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEK 353 M ++++ +G D+ + + P + L Y+ V +G+E + + + + Sbjct: 315 MDWMFDACSTTARRGAIDWTPKFKDALKPVFNNL---YDSVKNGDETKRSLEYNSQPDYR 371
Query: 354 EGLPAFPMGKIDKTRMWKVGERVRAVRPE 440 E A + +I +W+ G+ VR++RPE Sbjct: 372 ERYEA-ELDEIRNLEIWRAGKAVRSLRPE 399
Score = 46.6 bits (109), Expect = 1e-04 Identities = 27/59 (45%), Positives = 37/59 (62%) Frame = +3
Query: 441 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFM 617 G+ G L G G+++A Q EVLR++GHS SE NE+V EA SL P + A G+ +M Sbjct: 264 GERGCLMGGIHGMFLA----QYEVLRERGHSPSEAFNETVEEATQSLYPLIGAHGMDWM 318
>sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitochondrial OS=Schizosaccharomyces pombe GN=ilv5 PE=1 SV=2 Length = 404
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 8/152 (5%) Frame = +3
Query: 9 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG-- 182 E SD+ GERG L+G ++GL A ++ E G +A+ TVE T + I G Sbjct: 258 EVISDLVGERGCLMGGINGLFLAQYQVLRERGHSPAEAFNETVEEATQSLYPLIGKYGLD 317
Query: 183 -MLAVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAG-----RRF 344 M A ++ +G D+ + + +L E Y++V +GNE + + R Sbjct: 318 YMFAACSTTARRGAIDWTPRFLEAN---KKVLNELYDNVENGNEAKRSLEYNSAPNYREL 374
Query: 345 QEKEGLPAFPMGKIDKTRMWKVGERVRAVRPE 440 +KE + +I +WK GE VR++RPE Sbjct: 375 YDKE------LEEIRNLEIWKAGEVVRSLRPE 400
Score = 42.4 bits (98), Expect = 0.002 Identities = 24/59 (40%), Positives = 36/59 (61%) Frame = +3
Query: 441 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFM 617 G+ G L G G+++A Q +VLR++GHS +E NE+V EA SL P + G+ +M Sbjct: 265 GERGCLMGGINGLFLA----QYQVLRERGHSPAEAFNETVEEATQSLYPLIGKYGLDYM 319
>sp|A6Q461|ILVC_NITSB Ketol-acid reductoisomerase OS=Nitratiruptor sp. (strain SB155-2) GN=ilvC PE=3 SV=1 Length = 340
Score = 46.6 bits (109), Expect = 1e-04 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 182 +DE +D++GE+ +L G V L++A F TEAG PEE AY + + +I I G Sbjct: 186 KDETETDLFGEQAVLCGGVSALIQAGFETLTEAGYPEEMAYFECLHELK-LIVDLIYEGG 244
Query: 183 MLAVYNSLDEQGK-KDF----EIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAG---- 335 + + S+ + D+ + +S DIL +++ +G + ++ G Sbjct: 245 LANMRYSISNTAEYGDYVSGPRVINEASRQAMKDIL----KEIQNGKFAKDFILEGMAGY 300
Query: 336 -RRFQEKEGLPAFPMGKIDKTRMWKVGERVRAVRP 437 R E+ A P+ +VG+R+RA+ P Sbjct: 301 PRMTAERRNCEAHPIE--------QVGKRLRAMMP 327
>sp|Q7M851|ILVC_WOLSU Ketol-acid reductoisomerase OS=Wolinella succinogenes GN=ilvC PE=3 SV=1 Length = 340
Score = 43.1 bits (100), Expect = 0.001 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAY 125 +DE +D++GE+ +L G V LV+A F EAG PEE AY Sbjct: 186 KDETETDLFGEQAVLCGGVTALVKAGFETLVEAGYPEEMAY 226
>sp|Q7VGW6|ILVC_HELHP Ketol-acid reductoisomerase OS=Helicobacter hepaticus GN=ilvC PE=3 SV=1 Length = 341
Score = 43.1 bits (100), Expect = 0.001 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAY 125 +DE +D++GE+ +L G V LV+A F EAG PEE AY Sbjct: 187 KDETETDLFGEQAVLCGGVTSLVKAGFETLVEAGYPEEMAY 227
>sp|Q5SJ03|ILVC_THET8 Ketol-acid reductoisomerase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ilvC PE=3 SV=1 Length = 337
Score = 42.4 bits (98), Expect = 0.002 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 11/156 (7%) Frame = +3
Query: 3 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTIST-- 176 +DE +D++GE+ +L G + L+ A F EAG P E AY TV + ++ Sbjct: 184 KDETETDLFGEQAVLCGGLTRLIRAGFETLVEAGYPPEMAYFETVHEVKLIVDLIYEAGL 243
Query: 177 KGMLAVYNSLDEQG---KKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQ 347 KGM ++ E G + D + + +IL + SG R ++ + Sbjct: 244 KGMRYSISNTAEYGDYTRGDLAVPLEETKRRMREIL----RQIQSGEFAREWML-----E 294
Query: 348 EKEGLPAFPMGKIDKTRMW------KVGERVRAVRP 437 + G P + + W +VG R+RA+ P Sbjct: 295 NQVGSPVLEANR----KRWAAHPIEEVGSRLRAMMP 326
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQQ1 |
Definition |
tr|A9TQQ1|A9TQQ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
205 |
Score (bit) |
360.0 |
E-value |
5.0e-98 |
Report |
|