DK949711 |
Clone id |
TST38A01NGRL0006_L15 |
Library |
TST38 |
Length |
710 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_L15. 5' end sequence. |
Accession |
DK949711 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL295Contig1 |
Sequence |
CCGATCGAGGGCTGCATTTGGGGCAGGTGAGATTTGCTCAAGCTCAGCGGCTATGGCTTT CGCAGGAACCCAGCAAAAGTGCAAGGCCTGCGGCAAGACCGTGTACGTGGTGGATCAGCT CACCGCAGATAACGTGGTGTATCATAAGGCTTGCTTTCGATGCCACCATTGCAATGGCAC CCTCAAGTTGAGTAACTACTCTTCATTTGAGGGAACATTATATTGCAAGCCCCACTTTGA TCAATTGTTCAAAAGGACTGGAAGTCTTGACAAGAGCTTTGAGTCAGGTGTTCCAAAAAC CCCCAAATCTGTGGACAGAGGTTTTGATGGTGAATCGAAAACGCCCACAAAGTTTGCATC AATCTTTTCTGGGACACAGGAAAAGTGCTTGGCTTGCGGAAAGACTGTTTATCCGATCGA AAAGGTAAGCGTGGATGGTATGCTGTACCACAAGGCATGTTTTAAGTGTTGCCATGGGGG CTGTAGCTTGAGCCCCTCTAATTATGTAGCACATGAGGGCCGCCTCTATTGCCGACATCA CAATGCCCAACTCTTCAAGGAAAAAGGAGACTTCAGTCAATTGGAGAAAGTGCCTGCAGT GAAGGCTGCGTCAGACGATGCTTGAAGTTTGCAGGGTGCGCATCTACNATTTGGTCTATT CTGAACAGCTGCTTGGGACGGGGTTCAGTGTATAGTACAATGTTGCCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29675 |
Definition |
sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus annuus |
Align length |
187 |
Score (bit) |
263.0 |
E-value |
7.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949711|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_L15, 5' (710 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus an... 263 7e-70 sp|P50461|CSRP3_HUMAN Cysteine and glycine-rich protein 3 OS=Hom... 98 4e-20 sp|Q4U0T9|CSRP3_BOVIN Cysteine and glycine-rich protein 3 OS=Bos... 97 7e-20 sp|P50462|CSRP3_MOUSE Cysteine and glycine-rich protein 3 OS=Mus... 97 1e-19 sp|P50463|CSRP3_RAT Cysteine and glycine-rich protein 3 OS=Rattu... 96 2e-19 sp|Q16527|CSRP2_HUMAN Cysteine and glycine-rich protein 2 OS=Hom... 96 2e-19 sp|Q32LE9|CSRP2_BOVIN Cysteine and glycine-rich protein 2 OS=Bos... 96 2e-19 sp|Q62908|CSRP2_RAT Cysteine and glycine-rich protein 2 OS=Rattu... 95 3e-19 sp|Q05158|CSRP2_COTJA Cysteine and glycine-rich protein 2 OS=Cot... 95 3e-19 sp|P50460|CSRP2_CHICK Cysteine and glycine-rich protein 2 OS=Gal... 95 3e-19 sp|P97314|CSRP2_MOUSE Cysteine and glycine-rich protein 2 OS=Mus... 94 6e-19 sp|Q4U4S6|XIRP2_MOUSE Xin actin-binding repeat-containing protei... 93 2e-18 sp|Q0VFX8|CRIP2_BOVIN Cysteine-rich protein 2 OS=Bos taurus GN=C... 91 5e-18 sp|Q1LZA7|LIMD2_BOVIN LIM domain-containing protein 2 OS=Bos tau... 88 4e-17 sp|Q9BT23|LIMD2_HUMAN LIM domain-containing protein 2 OS=Homo sa... 88 5e-17 sp|Q4KM31|LIMD2_RAT LIM domain-containing protein 2 OS=Rattus no... 87 7e-17 sp|Q8BGB5|LIMD2_MOUSE LIM domain-containing protein 2 OS=Mus mus... 87 7e-17 sp|Q9ERG0|LIMA1_MOUSE LIM domain and actin-binding protein 1 OS=... 87 1e-16 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=... 86 3e-16 sp|P67967|CSRP1_COTJA Cysteine and glycine-rich protein 1 OS=Cot... 85 3e-16 sp|P67966|CSRP1_CHICK Cysteine and glycine-rich protein 1 OS=Gal... 85 3e-16 sp|Q5RCT4|CSRP1_PONAB Cysteine and glycine-rich protein 1 OS=Pon... 84 6e-16 sp|P21291|CSRP1_HUMAN Cysteine and glycine-rich protein 1 OS=Hom... 84 6e-16 sp|P36201|CRIP2_RAT Cysteine-rich protein 2 OS=Rattus norvegicus... 84 6e-16 sp|Q9DCT8|CRIP2_MOUSE Cysteine-rich protein 2 OS=Mus musculus GN... 84 6e-16 sp|P52943|CRIP2_HUMAN Cysteine-rich protein 2 OS=Homo sapiens GN... 84 6e-16 sp|P47875|CSRP1_RAT Cysteine and glycine-rich protein 1 OS=Rattu... 84 8e-16 sp|P97315|CSRP1_MOUSE Cysteine and glycine-rich protein 1 OS=Mus... 83 1e-15 sp|Q3MHY1|CSRP1_BOVIN Cysteine and glycine-rich protein 1 OS=Bos... 83 1e-15 sp|Q9BIW5|LIMC_DICDI LIM domain-containing protein C OS=Dictyost... 81 5e-15
>sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1 Length = 219
Score = 263 bits (672), Expect = 7e-70 Identities = 117/187 (62%), Positives = 148/187 (79%) Frame = +2
Query: 56 AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 235 +F GT QKC C KTVY+VD+L A+ VYHKACFRCHHCN TLKLSN++SF+G +YC+ H Sbjct: 3 SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62
Query: 236 FDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYP 415 FDQLFKRTGSL+KSF+ G PK +R F E+++ + +S F GT++KC AC K VYP Sbjct: 63 FDQLFKRTGSLEKSFD-GTPKFKP--ERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 119
Query: 416 IEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLEKVP 595 IE+V VDG YH+ACFKCCHGGC++SPSNY+AHEGRLYC+HH+ QLFK+KG++SQLE Sbjct: 120 IERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEE 179
Query: 596 AVKAASD 616 V A ++ Sbjct: 180 TVAAPAE 186
>sp|P50461|CSRP3_HUMAN Cysteine and glycine-rich protein 3 OS=Homo sapiens GN=CSRP3 PE=1 SV=1 Length = 194
Score = 98.2 bits (243), Expect = 4e-20 Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 15/183 (8%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC AC KTVY +++ + +HK CF C C L + ++ E +YCK + + Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 245 LFKRTG----------SLDKSFESGV-----PKTPKSVDRGFDGESKTPTKFASIFSGTQ 379 + G S D G+ PK +SV + P+KF + F G Sbjct: 65 RYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKPARSVT------TSNPSKFTAKF-GES 117
Query: 380 EKCLACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFK 559 EKC CGK+VY EKV G +HK CF+C G SL +N +G LYC+ A+ F Sbjct: 118 EKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFG 177
Query: 560 EKG 568 G Sbjct: 178 PTG 180
>sp|Q4U0T9|CSRP3_BOVIN Cysteine and glycine-rich protein 3 OS=Bos taurus GN=CSRP3 PE=2 SV=1 Length = 194
Score = 97.4 bits (241), Expect = 7e-20 Identities = 61/183 (33%), Positives = 83/183 (45%), Gaps = 15/183 (8%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC AC KTVY +++ + +HK CF C C L + ++ E +YCK + + Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 245 LFKRTG----------SLDKSFESGV-----PKTPKSVDRGFDGESKTPTKFASIFSGTQ 379 + G S D G+ PK +S S P+KFA G Sbjct: 65 RYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKQARSATT-----SSNPSKFAKF--GES 117
Query: 380 EKCLACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFK 559 EKC CGK+VY EKV G +HK CF+C G SL +N +G LYC+ A+ F Sbjct: 118 EKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFG 177
Query: 560 EKG 568 G Sbjct: 178 PTG 180
Score = 60.5 bits (145), Expect = 9e-09 Identities = 27/75 (36%), Positives = 42/75 (56%) Frame = +2
Query: 38 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 217 S+ + A G +KC CGK+VY +++ +HK CFRC C +L+ +N + +G Sbjct: 106 SNPSKFAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGE 165
Query: 218 LYCKPHFDQLFKRTG 262 LYCK + + F TG Sbjct: 166 LYCKVCYAKNFGPTG 180
>sp|P50462|CSRP3_MOUSE Cysteine and glycine-rich protein 3 OS=Mus musculus GN=Csrp3 PE=2 SV=1 Length = 194
Score = 96.7 bits (239), Expect = 1e-19 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 12/180 (6%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC AC KTVY +++ + +HK CF C C L + ++ E +YCK + + Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 245 LFKRTG----------SLDKSFESGVP--KTPKSVDRGFDGESKTPTKFASIFSGTQEKC 388 + G S D G+ ++PK + P+KF++ F G EKC Sbjct: 65 RYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAA---TTSNPSKFSAKF-GESEKC 120
Query: 389 LACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CGK+VY EKV G +HK CF+C G SL +N +G LYC+ A+ F G Sbjct: 121 PRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTG 180
>sp|P50463|CSRP3_RAT Cysteine and glycine-rich protein 3 OS=Rattus norvegicus GN=Csrp3 PE=1 SV=1 Length = 194
Score = 95.9 bits (237), Expect = 2e-19 Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 12/180 (6%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC AC KTVY +++ + +HK CF C C L + ++ E +YCK + + Sbjct: 5 GGGAKCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 245 LFKRTG----------SLDKSFESGVP--KTPKSVDRGFDGESKTPTKFASIFSGTQEKC 388 + G S D G+ ++PK + P+KF++ F G EKC Sbjct: 65 KYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAA---TTSNPSKFSAKF-GESEKC 120
Query: 389 LACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CGK+VY EKV G +HK CF C G SL +N +G LYC+ A+ F G Sbjct: 121 PRCGKSVYAAEKVMGGGKPWHKTCFPCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTG 180
>sp|Q16527|CSRP2_HUMAN Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3 Length = 193
Score = 95.9 bits (237), Expect = 2e-19 Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC ACG+TVY +++ D +H+ CF C C L + + + +YCK + + Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGK 64
Query: 245 LFKRTG----------SLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLA 394 + G ++D+ G+ P+SV + +KFA + G EKC Sbjct: 65 KYGPKGYGYGQGAGTLNMDRGERLGIK--PESVQPHRPTTNPNTSKFAQKYGGA-EKCSR 121
Query: 395 CGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CG +VY EK+ G +HK CF+C G SL + EG +YC+ A+ F KG Sbjct: 122 CGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
>sp|Q32LE9|CSRP2_BOVIN Cysteine and glycine-rich protein 2 OS=Bos taurus GN=CSRP2 PE=2 SV=3 Length = 193
Score = 95.9 bits (237), Expect = 2e-19 Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC ACG+TVY +++ D +H+ CF C C L + + + +YCK + + Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGK 64
Query: 245 LFKRTG----------SLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLA 394 + G ++D+ G+ P+SV + +KFA + G EKC Sbjct: 65 KYGPKGYGYGQGAGTLNMDRGERLGIK--PESVQPHRPTTNPNTSKFAQKYGGA-EKCSR 121
Query: 395 CGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CG +VY EK+ G +HK CF+C G SL + EG +YC+ A+ F KG Sbjct: 122 CGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
>sp|Q62908|CSRP2_RAT Cysteine and glycine-rich protein 2 OS=Rattus norvegicus GN=Csrp2 PE=2 SV=3 Length = 193
Score = 95.1 bits (235), Expect = 3e-19 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 10/178 (5%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC ACG+TVY +++ D +H+ CF C C L + + + +YCK + + Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGK 64
Query: 245 LFKRTG----------SLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLA 394 + G ++D+ G+ P+S + +KFA + G EKC Sbjct: 65 KYGPKGYGYGQGAGTLNMDRGERLGIK--PESAQPHRPTTNPNTSKFAQKYGGA-EKCSR 121
Query: 395 CGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CG +VY EK+ G +HK CF+C G SL + EG +YC+ A+ F KG Sbjct: 122 CGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
>sp|Q05158|CSRP2_COTJA Cysteine and glycine-rich protein 2 OS=Coturnix coturnix japonica GN=CSRP2 PE=1 SV=2 Length = 194
Score = 95.1 bits (235), Expect = 3e-19 Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 11/179 (6%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC ACG+TVY +++ D +H+ CF C C L + + + +YCK + + Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGK 64
Query: 245 LFKRTG----------SLDKSFESGV-PKTPKSVDRGFDGESKTPTKFASIFSGTQEKCL 391 + G ++D+ G+ P++ S R + +KFA F G EKC Sbjct: 65 KYGPKGYGYGQGAGTLNMDRGERLGIKPESSPSPHR--PTTNPNTSKFAQKFGGA-EKCS 121
Query: 392 ACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CG +VY EKV G +HK CF+C G SL + EG +YC+ A+ F KG Sbjct: 122 RCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 180
>sp|P50460|CSRP2_CHICK Cysteine and glycine-rich protein 2 OS=Gallus gallus GN=CSRP2 PE=2 SV=3 Length = 194
Score = 95.1 bits (235), Expect = 3e-19 Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 11/179 (6%) Frame = +2
Query: 65 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 244 G KC ACG+TVY +++ D +H+ CF C C L + + + +YCK + + Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGK 64
Query: 245 LFKRTG----------SLDKSFESGV-PKTPKSVDRGFDGESKTPTKFASIFSGTQEKCL 391 + G ++D+ G+ P++ S R + +KFA F G EKC Sbjct: 65 KYGPKGYGYGQGAGTLNMDRGERLGIKPESTPSPHR--PTTNPNTSKFAQKFGGA-EKCS 121
Query: 392 ACGKTVYPIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKG 568 CG +VY EKV G +HK CF+C G SL + EG +YC+ A+ F KG Sbjct: 122 RCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 180
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNM5 |
Definition |
tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
189 |
Score (bit) |
311.0 |
E-value |
2.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949711|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_L15, 5' (710 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea... 311 2e-83 tr|A9NSQ9|A9NSQ9_PICSI Putative uncharacterized protein OS=Picea... 309 1e-82 tr|B1PPT4|B1PPT4_PINPS LIM2 transcription factor (Fragment) OS=P... 304 4e-81 tr|A7PD59|A7PD59_VITVI Chromosome chr17 scaffold_12, whole genom... 298 2e-79 tr|Q94JX5|Q94JX5_ARATH Similar to transcription factor SF3 (Pir|... 284 5e-75 tr|Q306K1|Q306K1_BRANA LIM domain protein OS=Brassica napus GN=L... 284 5e-75 tr|Q9SNX4|Q9SNX4_TOBAC Pollen specific LIM domain protein 1a OS=... 280 5e-74 tr|A9PDY3|A9PDY3_POPTR Putative uncharacterized protein OS=Popul... 280 9e-74 tr|Q9XHG9|Q9XHG9_HELAN LIM domain protein WLIM-1 OS=Helianthus a... 279 1e-73 tr|Q9SP40|Q9SP40_TOBAC LIM domain protein PLIM1 OS=Nicotiana tab... 279 1e-73 tr|Q9SP33|Q9SP33_HELAN LIM domain protein WLIM1 OS=Helianthus an... 278 2e-73 tr|Q8SBC9|Q8SBC9_POPKI Transcription factor LIM OS=Populus kitak... 278 2e-73 tr|Q8SBC8|Q8SBC8_POPKI Transcription factor LIM OS=Populus kitak... 278 2e-73 tr|Q56R05|Q56R05_SOLLC Putative pollen specific LIM domain-conta... 278 2e-73 tr|A0SVL3|A0SVL3_9ROSI LIM domain protein GLIM1b OS=Populus trem... 278 2e-73 tr|B7FH07|B7FH07_MEDTR Putative uncharacterized protein OS=Medic... 277 4e-73 tr|A9SHN8|A9SHN8_PHYPA Predicted protein OS=Physcomitrella paten... 276 9e-73 tr|A9PAZ8|A9PAZ8_POPTR Putative uncharacterized protein OS=Popul... 276 9e-73 tr|A5BYE7|A5BYE7_VITVI Putative uncharacterized protein (Chromos... 276 9e-73 tr|A0SVL6|A0SVL6_9ROSI LIM domain protein WLIM1b OS=Populus trem... 276 9e-73 tr|A0SVL5|A0SVL5_9ROSI LIM domain protein WLIM1a OS=Populus trem... 276 9e-73 tr|Q59HI3|Q59HI3_EUCGL Transcription factor lim1 OS=Eucalyptus g... 276 1e-72 tr|Q59HI2|Q59HI2_EUCCA Transcription factor lim1 OS=Eucalyptus c... 276 1e-72 tr|A9PB06|A9PB06_POPTR Putative uncharacterized protein OS=Popul... 276 1e-72 tr|Q9SNX3|Q9SNX3_TOBAC Pollen specific LIM domain protein 1b OS=... 275 2e-72 tr|Q2QQ10|Q2QQ10_ORYSJ Pollen-specific protein SF3, putative, ex... 275 3e-72 tr|A0SVL2|A0SVL2_9ROSI LIM domain protein GLIM1a OS=Populus trem... 275 3e-72 tr|Q9ZTN6|Q9ZTN6_PETHY PGPS/D1 OS=Petunia hybrida GN=PGPS/D1 PE=... 274 4e-72 tr|A9PG33|A9PG33_POPTR Putative uncharacterized protein OS=Popul... 274 5e-72 tr|B6T925|B6T925_MAIZE Pollen-specific protein SF3 OS=Zea mays P... 273 1e-71
>tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 187
Score = 311 bits (798), Expect = 2e-83 Identities = 146/189 (77%), Positives = 166/189 (87%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGTQQKCKAC KTVYVVDQLTAD V+HKACFRCHHCNGTLKLSNYSSFEG LYCKP Sbjct: 1 MAFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFKRTGSLDKSFE G PK K+ ++ DGE KTP++ +++FSGTQEKCLACG TVY Sbjct: 61 HFDQLFKRTGSLDKSFE-GTPKAVKN-EKLNDGEIKTPSRVSALFSGTQEKCLACGNTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLEKV 592 PIEKVSV+G+ YHK CFKC HGGC +SPSNY+A EGRLYC+HH+AQLFKEKG++SQL K Sbjct: 119 PIEKVSVEGVGYHKQCFKCIHGGCVISPSNYIAIEGRLYCKHHHAQLFKEKGNYSQLIKT 178
Query: 593 PAVKAASDD 619 P+VK S++ Sbjct: 179 PSVKEISEN 187
Score = 85.5 bits (210), Expect = 3e-15 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Frame = +2
Query: 26 GEICSSSAAMA-FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYS 202 GEI + S A F+GTQ+KC ACG TVY +++++ + V YHK CF+C H + SNY Sbjct: 91 GEIKTPSRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKQCFKCIHGGCVISPSNYI 150
Query: 203 SFEGTLYCKPHFDQLFKRTGS 265 + EG LYCK H QLFK G+ Sbjct: 151 AIEGRLYCKHHHAQLFKEKGN 171
>tr|A9NSQ9|A9NSQ9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 191
Score = 309 bits (792), Expect = 1e-82 Identities = 140/189 (74%), Positives = 165/189 (87%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGT QKCKAC KTVY+VDQLTADN VYHK+CFRCHHCNGTLKLSNYSSFEG LYCKP Sbjct: 1 MAFAGTTQKCKACEKTVYLVDQLTADNSVYHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFKRTGSLDKSFE+ +P+ ++ D+ + ESKTP + +++FSGTQ+KC+ACGKTVY Sbjct: 61 HFDQLFKRTGSLDKSFEA-IPRASRN-DKTQENESKTPNRVSTMFSGTQDKCVACGKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLEKV 592 PIEKV+VDG YH+ CFKCCHGGC +SPSNYVAHEGRLYCRHH++QLF+EKG+FSQL K Sbjct: 119 PIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRLYCRHHSSQLFREKGNFSQLAKG 178
Query: 593 PAVKAASDD 619 K +++ Sbjct: 179 TPTKGVTEN 187
>tr|B1PPT4|B1PPT4_PINPS LIM2 transcription factor (Fragment) OS=Pinus pinaster GN=LIM2 PE=4 SV=1 Length = 182
Score = 304 bits (778), Expect = 4e-81 Identities = 136/184 (73%), Positives = 162/184 (88%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGT QKCKAC KTVY+VDQLTADN V+HK+CFRCHHCNGTLKLSNYSSFEG LYCKP Sbjct: 1 MAFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFKRTGSLDKSF + +P+ ++ D+ + E++TP++ +++FSGTQ+KC+ACGKTVY Sbjct: 61 HFDQLFKRTGSLDKSF-AAIPRASRN-DKMHENENRTPSRVSALFSGTQDKCVACGKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLEKV 592 PIEKV+VDG YH+ CFKCCHGGC +SPSNYVAHEGRLYCRHH++QLF+EKG+FSQL K Sbjct: 119 PIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRLYCRHHSSQLFREKGNFSQLSKA 178
Query: 593 PAVK 604 K Sbjct: 179 TPQK 182
Score = 82.0 bits (201), Expect = 3e-14 Identities = 34/78 (43%), Positives = 48/78 (61%) Frame = +2
Query: 41 SSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTL 220 S + F+GTQ KC ACGKTVY ++++ D YH+ CF+C H + SNY + EG L Sbjct: 97 SRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRL 156
Query: 221 YCKPHFDQLFKRTGSLDK 274 YC+ H QLF+ G+ + Sbjct: 157 YCRHHSSQLFREKGNFSQ 174
>tr|A7PD59|A7PD59_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016150001 PE=4 SV=1 Length = 182
Score = 298 bits (763), Expect = 2e-79 Identities = 139/182 (76%), Positives = 157/182 (86%) Frame = +2
Query: 59 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 238 FAGT QKCKAC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNYSSFEG LYCKPHF Sbjct: 4 FAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 63
Query: 239 DQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYPI 418 DQLFK TGSLDKSFE G PKT +SVD+G +T +K +S+F+GTQEKC+AC KTVYPI Sbjct: 64 DQLFKMTGSLDKSFE-GAPKTVRSVDQG-----QTNSKVSSMFAGTQEKCVACKKTVYPI 117
Query: 419 EKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLEKVPA 598 EKV VDG YHKACF+C HGGC++SPSNY+AHE RLYCRHH++QLFKEKG+FSQL+K Sbjct: 118 EKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHRLYCRHHHSQLFKEKGNFSQLDKQEQ 177
Query: 599 VK 604 VK Sbjct: 178 VK 179
Score = 85.9 bits (211), Expect = 2e-15 Identities = 38/79 (48%), Positives = 50/79 (63%) Frame = +2
Query: 38 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 217 +S + FAGTQ+KC AC KTVY ++++ D YHKACFRC H T+ SNY + E Sbjct: 93 NSKVSSMFAGTQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHR 152
Query: 218 LYCKPHFDQLFKRTGSLDK 274 LYC+ H QLFK G+ + Sbjct: 153 LYCRHHHSQLFKEKGNFSQ 171
>tr|Q94JX5|Q94JX5_ARATH Similar to transcription factor SF3 (Pir|IS37656) (Putative transcription factor) OS=Arabidopsis thaliana GN=At1g10200 PE=2 SV=1 Length = 190
Score = 284 bits (726), Expect = 5e-75 Identities = 130/178 (73%), Positives = 150/178 (84%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGT QKC AC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNY+SFEG LYC+P Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQ FKRTGSL+KSFE G PK K DR +GE TK +++F GT+EKC+ C KTVY Sbjct: 61 HFDQNFKRTGSLEKSFE-GTPKIGKP-DRPLEGERPAGTKVSNMFGGTREKCVGCDKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 PIEKVSV+G LYHK+CFKC HGGC++SPSNY+AHEG+LYC+HH+ QL KEKG+ SQLE Sbjct: 119 PIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLE 176
>tr|Q306K1|Q306K1_BRANA LIM domain protein OS=Brassica napus GN=LIM PE=2 SV=1 Length = 189
Score = 284 bits (726), Expect = 5e-75 Identities = 130/178 (73%), Positives = 150/178 (84%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGT QKC AC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNY+SFEG LYC+P Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGALYCRP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQ FKRTGSL+KSFE G PK K DR +GE TK +++F GT+EKC+ C KTVY Sbjct: 61 HFDQNFKRTGSLEKSFE-GTPKIGKP-DRPLEGERPAGTKVSNMFGGTREKCVGCDKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 PIEKVSV+G LYHK+CFKC HGGC++SPSNY+AHEG+LYC+HH+ QL KEKG+ SQLE Sbjct: 119 PIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLE 176
>tr|Q9SNX4|Q9SNX4_TOBAC Pollen specific LIM domain protein 1a OS=Nicotiana tabacum PE=2 SV=1 Length = 191
Score = 280 bits (717), Expect = 5e-74 Identities = 126/178 (70%), Positives = 151/178 (84%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 M FAGT QKC AC KTVY+VD+L ADN +YHKACFRC+HC TLKLSN++SFEG +YC+P Sbjct: 1 MTFAGTTQKCSACEKTVYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFKRTGSLDKSFE G PK K ++ D E+ + TK +S+F+GT+EKC+ C KTVY Sbjct: 61 HFDQLFKRTGSLDKSFE-GTPKVTKP-EKPVDNENGSGTKVSSLFAGTREKCVGCTKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 PIEKVSV+G YHKACFKC HGGC++SPSNY+AHEGRLYC+HH+ QLFKEKG++SQLE Sbjct: 119 PIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLE 176
>tr|A9PDY3|A9PDY3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 196
Score = 280 bits (715), Expect = 9e-74 Identities = 124/177 (70%), Positives = 151/177 (85%) Frame = +2
Query: 56 AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 235 AFAGTQQKC AC KTVY+VD+LTADN +YHKACFRCHHC GTLKLSNYSSFEG LYC+PH Sbjct: 3 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 62
Query: 236 FDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYP 415 +DQLFKRTGSLDKSFE TPK V +++ +K +++F+GT+EKC+ C KTVYP Sbjct: 63 YDQLFKRTGSLDKSFEG----TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYP 118
Query: 416 IEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 IEKV+V+G YH++CFKC HGGC++SPSNY+AHEG+LYC+HH+ QLFKEKG++SQLE Sbjct: 119 IEKVTVNGTQYHRSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLE 175
Score = 84.7 bits (208), Expect = 5e-15 Identities = 39/93 (41%), Positives = 58/93 (62%) Frame = +2
Query: 38 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 217 +S + FAGT++KC C KTVY ++++T + YH++CF+C H T+ SNY + EG Sbjct: 95 ASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTQYHRSCFKCTHGGCTISPSNYIAHEGK 154
Query: 218 LYCKPHFDQLFKRTGSLDKSFESGVPKTPKSVD 316 LYCK H QLFK G+ + E+ K P +V+ Sbjct: 155 LYCKHHHIQLFKEKGNYSQ-LENEREKNPVTVN 186
>tr|Q9XHG9|Q9XHG9_HELAN LIM domain protein WLIM-1 OS=Helianthus annuus GN=WLIM-1 PE=4 SV=1 Length = 188
Score = 279 bits (714), Expect = 1e-73 Identities = 128/178 (71%), Positives = 146/178 (82%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 MAFAGT QKC AC KTVY+VD+LTADN V+HKACFRCHHCNGTLKLSNY+SFEG LYC+P Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFK+TGSLDKSFE G PK K + DGE K +S+F GT++KCL C TVY Sbjct: 61 HFDQLFKKTGSLDKSFE-GTPKIVKQ-PKTIDGEKPMANKVSSMFVGTKDKCLGCKNTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 P EKVSV+G YHK+CFKC HGGC++SPSNY+AHEG LYCRHH+ QL KEKG+ SQLE Sbjct: 119 PTEKVSVNGTAYHKSCFKCSHGGCTISPSNYIAHEGHLYCRHHHTQLIKEKGNLSQLE 176
Score = 75.9 bits (185), Expect = 2e-12 Identities = 31/79 (39%), Positives = 47/79 (59%) Frame = +2
Query: 38 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 217 ++ + F GT+ KC C TVY ++++ + YHK+CF+C H T+ SNY + EG Sbjct: 96 ANKVSSMFVGTKDKCLGCKNTVYPTEKVSVNGTAYHKSCFKCSHGGCTISPSNYIAHEGH 155
Query: 218 LYCKPHFDQLFKRTGSLDK 274 LYC+ H QL K G+L + Sbjct: 156 LYCRHHHTQLIKEKGNLSQ 174
>tr|Q9SP40|Q9SP40_TOBAC LIM domain protein PLIM1 OS=Nicotiana tabacum GN=PLIM1 PE=4 SV=1 Length = 191
Score = 279 bits (713), Expect = 1e-73 Identities = 125/178 (70%), Positives = 151/178 (84%) Frame = +2
Query: 53 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 232 M FAGT QKC AC KTVY+VD+L ADN +YHKACFRC+HC TLKLSN++SFEG +YC+P Sbjct: 1 MTFAGTTQKCSACEKTVYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRP 60
Query: 233 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 412 HFDQLFKRTGSLDKSFE G PK K ++ D E+ + +K +S+F+GT+EKC+ C KTVY Sbjct: 61 HFDQLFKRTGSLDKSFE-GTPKVTKP-EKPVDNENGSGSKVSSLFAGTREKCVGCTKTVY 118
Query: 413 PIEKVSVDGMLYHKACFKCCHGGCSLSPSNYVAHEGRLYCRHHNAQLFKEKGDFSQLE 586 PIEKVSV+G YHKACFKC HGGC++SPSNY+AHEGRLYC+HH+ QLFKEKG++SQLE Sbjct: 119 PIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLE 176
Score = 84.3 bits (207), Expect = 7e-15 Identities = 36/75 (48%), Positives = 49/75 (65%) Frame = +2
Query: 41 SSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTL 220 S + FAGT++KC C KTVY +++++ + YHKACF+C H T+ SNY + EG L Sbjct: 97 SKVSSLFAGTREKCVGCTKTVYPIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRL 156
Query: 221 YCKPHFDQLFKRTGS 265 YCK H QLFK G+ Sbjct: 157 YCKHHHIQLFKEKGN 171
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