| DK949738 |
| Clone id |
TST38A01NGRL0006_M18 |
| Library |
TST38 |
| Length |
675 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_M18. 5' end sequence. |
| Accession |
DK949738 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL543Contig1 |
| Sequence |
CGAGCTCGTGTGTGGCAGGCAGCAGCGGTAGCTCTCCCTGCCGAATCGTCACACACGCGG CGGCTCACCTCAGGAGACCGATAGCAGCCGCTTGCCTCGCACCTAAGCTAGAGCGTCCGT CAGGTTTACGAAGCTCTTTCATCGAGACACTTACCATCACCGCGCGTTCATCAACACGGC TCCTCCGGCTCCGTCTTGCTATCTGTGTGCGCGCCACAAGCCAGCTGGAGACTAGTAGCT CGCCTGTTTCAAAGGAGGTCGTTCCTGACACGCAATTTTCCATTTTTAAGACATCCTTAG GCACAATTGGACTCAGTGCTGGGCTTGTGCTACTCTCGTATGGTTTTGGCGCATACTTCA CTGTTCTTCCGGGAGCTGAATGGTCGGCTATAATGCTAACATATGGATTTCCGCTCGCAG TTATTGGCATGGCTCTCAAGTATGCAGAGCTAAAACCTGTGCCTTGCACAACATATGCTG ATGCTTTGGCTTTACAAGAAGCCCAAGCAACGCCCACTTTGAAGCAGGTAAAGAGTGATG TGACGAGGTTCCGTTACGGTGATGAACAACATTTGGATGAAGCTTTGAAAAGGATCTTTC GATATGGTCAAGGAGGAGGTATTCAACGTCGTAATGCTCCTGTGCTGCAGGCTATTCGCG AAGAGGTTACCACTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q55403 |
| Definition |
sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803) |
| Align length |
128 |
| Score (bit) |
86.3 |
| E-value |
1.0e-16 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9NSY7 |
| Definition |
tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
156 |
| Score (bit) |
237.0 |
| E-value |
6.0e-61 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949738|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_M18, 5' (675 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea... 237 6e-61 tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1 226 8e-58 tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea m... 226 8e-58 tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subs... 224 4e-57 tr|B8BA11|B8BA11_ORYSI Putative uncharacterized protein OS=Oryza... 222 1e-56 tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g3866... 217 5e-55 tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1 217 5e-55 tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome... 217 5e-55 tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein At5g3866... 215 2e-54 tr|A3BSD0|A3BSD0_ORYSJ Putative uncharacterized protein OS=Oryza... 199 1e-49 tr|Q00WY3|Q00WY3_OSTTA Homology to unknown gene OS=Ostreococcus ... 164 5e-39 tr|A8JF87|A8JF87_CHLRE Predicted protein OS=Chlamydomonas reinha... 162 2e-38 tr|A4S6L6|A4S6L6_OSTLU Predicted protein (Fragment) OS=Ostreococ... 161 3e-38 tr|A9TNK0|A9TNK0_PHYPA Predicted protein (Fragment) OS=Physcomit... 158 3e-37 tr|Q9FFV6|Q9FFV6_ARATH Genomic DNA, chromosome 5, P1 clone:MBB18... 157 6e-37 tr|A9NQG3|A9NQG3_PICSI Putative uncharacterized protein OS=Picea... 132 3e-29 tr|A7PY05|A7PY05_VITVI Chromosome chr15 scaffold_37, whole genom... 112 2e-23 tr|A2YUD7|A2YUD7_ORYSI Putative uncharacterized protein OS=Oryza... 107 9e-22 tr|A7QLX1|A7QLX1_VITVI Chromosome chr18 scaffold_122, whole geno... 100 6e-20 tr|Q4BWL4|Q4BWL4_CROWT Putative uncharacterized protein OS=Croco... 94 1e-17 tr|Q10YP5|Q10YP5_TRIEI Putative uncharacterized protein OS=Trich... 93 1e-17 tr|B1X1Q3|B1X1Q3_CYAA5 Putative uncharacterized protein OS=Cyano... 91 5e-17 tr|A3IVT2|A3IVT2_9CHRO Putative uncharacterized protein OS=Cyano... 91 5e-17 tr|B7KBA9|B7KBA9_9CHRO Putative uncharacterized protein OS=Cyano... 89 2e-16 tr|B7JZE9|B7JZE9_SYNP8 Putative uncharacterized protein OS=Synec... 89 3e-16 tr|B4C670|B4C670_9CHRO Putative uncharacterized protein OS=Cyano... 89 3e-16 tr|B5VWA7|B5VWA7_SPIMA Putative uncharacterized protein OS=Arthr... 88 4e-16 tr|B8BZ46|B8BZ46_THAPS Predicted protein OS=Thalassiosira pseudo... 87 1e-15 tr|A0YX90|A0YX90_9CYAN Putative uncharacterized protein OS=Lyngb... 86 2e-15 tr|Q5MZ47|Q5MZ47_SYNP6 Putative uncharacterized protein OS=Synec... 86 3e-15
>tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 275
Score = 237 bits (604), Expect = 6e-61 Identities = 114/156 (73%), Positives = 131/156 (83%), Gaps = 1/156 (0%) Frame = +3
Query: 207 VRATSQLETSSSPVS-KEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEW 383 VR SQ++ + S K++VPD+ SI K S G +GL+AG LLSYGFGAYF +LPG+EW Sbjct: 58 VRGASQVDAAQPSTSDKQIVPDSDLSITKISFGVVGLAAGTTLLSYGFGAYFNILPGSEW 117
Query: 384 SAIMLTYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGD 563 SA+MLTYGFPLA+IGMALKYAELKP+PC TY+DALAL+E +ATP L QV+ DV RFRYGD Sbjct: 118 SALMLTYGFPLAIIGMALKYAELKPIPCITYSDALALRETKATPVLNQVRKDVARFRYGD 177
Query: 564 EQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVT 671 EQHLDEALKRIFRYGQGGGIQRRNAPVL IREEVT Sbjct: 178 EQHLDEALKRIFRYGQGGGIQRRNAPVLSMIREEVT 213
>tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1 Length = 261
Score = 226 bits (577), Expect = 8e-58 Identities = 113/158 (71%), Positives = 127/158 (80%), Gaps = 3/158 (1%) Frame = +3
Query: 207 VRATSQLETSSSPVS---KEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGA 377 VRA + P S K VVPD +FS+ K S G IGL GL LLSYGFG+YF +LPG+ Sbjct: 45 VRAADSSSPPTVPASAAGKAVVPDDEFSLAKVSFGVIGLGLGLSLLSYGFGSYFNLLPGS 104
Query: 378 EWSAIMLTYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRY 557 EWSA++LTYGFPL +IGMALKYAELKPVPC TYADA AL+E ATP LKQV+SDVTRFRY Sbjct: 105 EWSALLLTYGFPLTIIGMALKYAELKPVPCITYADAFALREKCATPILKQVRSDVTRFRY 164
Query: 558 GDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVT 671 GDEQHLDEAL+RIF+YG GGGI RRNAP+LQ IREEVT Sbjct: 165 GDEQHLDEALQRIFQYGLGGGIPRRNAPILQKIREEVT 202
>tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 261
Score = 226 bits (577), Expect = 8e-58 Identities = 113/158 (71%), Positives = 127/158 (80%), Gaps = 3/158 (1%) Frame = +3
Query: 207 VRATSQLETSSSPVS---KEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGA 377 VRA + P S K VVPD +FS+ K S G IGL GL LLSYGFG+YF +LPG+ Sbjct: 45 VRAAESSSPPTVPASAAGKAVVPDDEFSLAKVSFGVIGLGLGLSLLSYGFGSYFNLLPGS 104
Query: 378 EWSAIMLTYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRY 557 EWSA++LTYGFPL +IGMALKYAELKPVPC TYADA AL+E ATP LKQV+SDVTRFRY Sbjct: 105 EWSALLLTYGFPLTIIGMALKYAELKPVPCITYADAFALREKCATPILKQVRSDVTRFRY 164
Query: 558 GDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVT 671 GDEQHLDEAL+RIF+YG GGGI RRNAP+LQ IREEVT Sbjct: 165 GDEQHLDEALQRIFQYGLGGGIPRRNAPILQKIREEVT 202
>tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subsp. japonica GN=P0488B06.35 PE=2 SV=1 Length = 271
Score = 224 bits (571), Expect = 4e-57 Identities = 108/147 (73%), Positives = 123/147 (83%) Frame = +3
Query: 231 TSSSPVSKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIMLTYGF 410 +S + K VVPD +F++ K S G IGL G LLSYGFGAYF +LPG+EWSA+MLTYGF Sbjct: 68 SSGAAAGKAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGF 127
Query: 411 PLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLDEALK 590 PL +IGMALKYAELKPVPCTTYADA AL+E ATP L QV+SDVTR+RYGDEQHLDEALK Sbjct: 128 PLTIIGMALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALK 187
Query: 591 RIFRYGQGGGIQRRNAPVLQAIREEVT 671 RIF+YG GGGI RR+AP+LQ IREEVT Sbjct: 188 RIFQYGLGGGIPRRSAPILQNIREEVT 214
>tr|B8BA11|B8BA11_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28948 PE=4 SV=1 Length = 286
Score = 222 bits (566), Expect = 1e-56 Identities = 107/147 (72%), Positives = 122/147 (82%) Frame = +3
Query: 231 TSSSPVSKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIMLTYGF 410 +S + K VVPD +F++ K S G IGL G LLSYGFGAYF +LPG+EWSA+MLTYGF Sbjct: 68 SSGAAAGKAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGF 127
Query: 411 PLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLDEALK 590 PL +IGMALKYAELKPVPCTTYADA AL+E ATP L QV+SDVTR+RYGDEQHLDEALK Sbjct: 128 PLTIIGMALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALK 187
Query: 591 RIFRYGQGGGIQRRNAPVLQAIREEVT 671 RIF+YG GGGI RR+AP+LQ IREE T Sbjct: 188 RIFQYGLGGGIPRRSAPILQNIREEYT 214
>tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g38660 OS=Arabidopsis thaliana GN=At5g38660 PE=2 SV=1 Length = 286
Score = 217 bits (553), Expect = 5e-55 Identities = 105/152 (69%), Positives = 127/152 (83%), Gaps = 4/152 (2%) Frame = +3
Query: 231 TSSSPV----SKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIML 398 TSSSP + ++PD +F++ K S G IGL G+ LLSYGFGAYFT+LPG EWSAIML Sbjct: 70 TSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEWSAIML 129
Query: 399 TYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLD 578 TYGFPL++IGMALKYAELKPVPC +Y+DA+ L+E+ ATP L QV++DVTR+RYGDEQHL+ Sbjct: 130 TYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGDEQHLE 189
Query: 579 EALKRIFRYGQGGGIQRRNAPVLQAIREEVTT 674 EALKRIF+YG GGGI RR+AP+LQ IREEV T Sbjct: 190 EALKRIFQYGLGGGIPRRSAPILQLIREEVLT 221
>tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1 Length = 286
Score = 217 bits (553), Expect = 5e-55 Identities = 105/152 (69%), Positives = 127/152 (83%), Gaps = 4/152 (2%) Frame = +3
Query: 231 TSSSPV----SKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIML 398 TSSSP + ++PD +F++ K S G IGL G+ LLSYGFGAYFT+LPG EWSAIML Sbjct: 70 TSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEWSAIML 129
Query: 399 TYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLD 578 TYGFPL++IGMALKYAELKPVPC +Y+DA+ L+E+ ATP L QV++DVTR+RYGDEQHL+ Sbjct: 130 TYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGDEQHLE 189
Query: 579 EALKRIFRYGQGGGIQRRNAPVLQAIREEVTT 674 EALKRIF+YG GGGI RR+AP+LQ IREEV T Sbjct: 190 EALKRIFQYGLGGGIPRRSAPILQLIREEVLT 221
>tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038180001 PE=4 SV=1 Length = 279
Score = 217 bits (553), Expect = 5e-55 Identities = 105/145 (72%), Positives = 120/145 (82%) Frame = +3
Query: 237 SSPVSKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIMLTYGFPL 416 SS K +V D +FS+ K S G IGL G+ LLSYGFGAYF +LPG+EWSAIMLTYGFPL Sbjct: 77 SSLSDKTIVVDEEFSLAKVSFGVIGLGLGITLLSYGFGAYFNILPGSEWSAIMLTYGFPL 136
Query: 417 AVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLDEALKRI 596 A+IGMALKYAELKPVPC TY+DA L+E ATP LKQV++DV R+RYGDEQHL+EALKRI Sbjct: 137 AIIGMALKYAELKPVPCLTYSDAQKLRETSATPILKQVRNDVIRYRYGDEQHLEEALKRI 196
Query: 597 FRYGQGGGIQRRNAPVLQAIREEVT 671 F+YG GGGI RR+AP LQ IREEVT Sbjct: 197 FQYGLGGGIPRRSAPTLQMIREEVT 221
>tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein At5g38660/MBB18_21 OS=Arabidopsis thaliana GN=At5g38660/MBB18_21 PE=2 SV=1 Length = 286
Score = 215 bits (547), Expect = 2e-54 Identities = 104/152 (68%), Positives = 126/152 (82%), Gaps = 4/152 (2%) Frame = +3
Query: 231 TSSSPV----SKEVVPDTQFSIFKTSLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIML 398 TSSSP + ++PD +F++ K S G IGL G+ LLSYGFGAYFT+LPG EWSAIML Sbjct: 70 TSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEWSAIML 129
Query: 399 TYGFPLAVIGMALKYAELKPVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLD 578 TYGFPL++IGMALKYAELKPVPC +Y+DA+ L+E+ ATP L QV++DVTR+RYGD QHL+ Sbjct: 130 TYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGDAQHLE 189
Query: 579 EALKRIFRYGQGGGIQRRNAPVLQAIREEVTT 674 EALKRIF+YG GGGI RR+AP+LQ IREEV T Sbjct: 190 EALKRIFQYGLGGGIPRRSAPILQLIREEVLT 221
>tr|A3BSD0|A3BSD0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025952 PE=4 SV=1 Length = 294
Score = 199 bits (506), Expect = 1e-49 Identities = 99/132 (75%), Positives = 109/132 (82%), Gaps = 6/132 (4%) Frame = +3
Query: 294 SLGTIGLSAGLVLLSYGFGAYFTVLPGAEWSAIMLTYGFPLAVIGMALK------YAELK 455 S G IGL G LLSYGFGAYF +LPG+EWSA+MLTYGFPL +IGMALK YAELK Sbjct: 91 SFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGMALKARTIPHYAELK 150
Query: 456 PVPCTTYADALALQEAQATPTLKQVKSDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRN 635 PVPCTTYADA AL+E ATP L QV+SDVTR+RYGDEQHLDEALKRIF+YG GGGI RR+ Sbjct: 151 PVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRS 210
Query: 636 APVLQAIREEVT 671 AP+LQ IREE T Sbjct: 211 APILQNIREEYT 222
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