DK949759
Clone id TST38A01NGRL0006_N15
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_N15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
AGCAGAGCTCTACATCCGCAGCATCTACATTACTTACATTAGCCTGCAGAACCTCAAAAT
GGTATCGTCTCTTTCATCCCGCCAGCAGATTGCTGCTGCAGCGGGGGCTGTGGGTTCTCG
CCATAGCTACACGCAGAAGAGCTCGGCATCAGTCAAAATACCGTCCTCCTTTAATGGGCT
GAGGAAATCTGGGCTATGGGTTTGTAGAAAGGAATCCACAGCCACACTTAACAACAGCAC
ACAGAAAACATTCCTCCTTGCTTTGGTTGCGTCTGCGGCCGCTCCTCCAACCACCTCTAC
TGTCACTATCCCTTCACTAAACGAGCTCCCCATTAATGGGTTTATCAATTCACACGGTAG
AATCAAACCTCCAGTTGAGCCAAATACTGCAGCCTCCGTGTTTGCCGTGCTTGACAAGAA
CAAGAAGGTTCAGTACATCGGGTTCTCGAAAGACCTTAGAAATTCTCTCAGAGTTTTGAT
GGGCAGGAGGCCGGAGTATTGCTACTTTTTTAAGGTTTTCAACCTTCGGGAGTTGGACCA
GGCGGTCATGTTGCAAGCACGGCAACAGTGGATGTCCGAGCTGGGAGTTGCACCTGATGG
CAATTCGGATCCAACCCAACGGAAATTTTGGGAACAACCAGTCGATGCCGGGTCTATCTC
AGAGAGGGGAAAATCTGCT
■■Homology search results ■■ -
sp_hit_id Q8H7F6
Definition sp|Q8H7F6|GRS16_ARATH Monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana
Align length 77
Score (bit) 49.7
E-value 1.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949759|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_N15, 5'
(679 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8H7F6|GRS16_ARATH Monothiol glutaredoxin-S16, chloroplastic ... 50 1e-05
sp|Q6NUV0|RB3GP_DANRE Rab3 GTPase-activating protein catalytic s... 35 0.37
sp|Q1IDB9|MNMC_PSEE4 tRNA 5-methylaminomethyl-2-thiouridine bios... 35 0.48
sp|Q6J2E6|HOPW2_PSEYM Putative truncated effector protein hopW1-... 34 0.82
sp|Q9ZBD8|HELY_MYCLE Probable helicase helY OS=Mycobacterium lep... 32 2.4
sp|Q8RP17|HOPW1_PSEYM Effector protein hopW1-1 OS=Pseudomonas sy... 32 4.1
sp|P32579|SUA5_YEAST Protein SUA5 OS=Saccharomyces cerevisiae GN... 30 9.1

>sp|Q8H7F6|GRS16_ARATH Monothiol glutaredoxin-S16, chloroplastic
OS=Arabidopsis thaliana GN=GRXS16 PE=2 SV=2
Length = 293

Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +2

Query: 386 TAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVFNLRELDQAVMLQARQ 565
+A+ V+AV DK+ ++Q++G S+++ S+ + PE C KV + E D+AV+ QA +
Sbjct: 85 SASGVYAVYDKSDELQFVGISRNIAASVSAHLKSVPELCGSVKVGIVEEPDKAVLTQAWK 144

Query: 566 QWMSE----LGVAPDGN 604
W+ E G P GN
Sbjct: 145 LWIEEHIKVTGKVPPGN 161


>sp|Q6NUV0|RB3GP_DANRE Rab3 GTPase-activating protein catalytic
subunit OS=Danio rerio GN=rab3gap1 PE=2 SV=2
Length = 969

Score = 35.0 bits (79), Expect = 0.37
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1

Query: 604 IAIRCNSQLGHPLLPCLQHDRLVQLPKVENLKKVAILRPPAHQNSERISKVFREPD 437
+A++ S+L LLPC+ H L+++ + E+ + + +R Q S SK+ R P+
Sbjct: 756 LALQKPSELTRHLLPCVLHAALLKIKEEESAEDLPSVRSSLQQISSSASKILRHPN 811


>sp|Q1IDB9|MNMC_PSEE4 tRNA 5-methylaminomethyl-2-thiouridine
biosynthesis bifunctional protein mnmC OS=Pseudomonas
entomophila (strain L48) GN=mnmC PE=3 SV=1
Length = 654

Score = 34.7 bits (78), Expect = 0.48
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1

Query: 616 GWIRIAIRCNSQLGHPLLPCLQHDRLVQLPKVE 518
GW+ C +QLGHP + L H +++L KV+
Sbjct: 395 GWVHPPALCQAQLGHPNVRLLNHHEVIELRKVD 427


>sp|Q6J2E6|HOPW2_PSEYM Putative truncated effector protein hopW1-2
OS=Pseudomonas syringae pv. maculicola GN=hopW1-2 PE=3
SV=1
Length = 240

Score = 33.9 bits (76), Expect = 0.82
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -1

Query: 595 RCNSQLGHPLLPCLQHDRLVQLPKVENLKKVAILRPPAHQNSERISKVFREPDVLNLLVL 416
RC SQL H +D L Q+ ENLKK + + + E +KV PD+L L+ L
Sbjct: 116 RCKSQLAHTPASDASYDLLAQV--CENLKKARLHQSISQMTGEAHAKVRGVPDLLALIQL 173


>sp|Q9ZBD8|HELY_MYCLE Probable helicase helY OS=Mycobacterium leprae
GN=helY PE=3 SV=1
Length = 920

Score = 32.3 bits (72), Expect = 2.4
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Frame = -1

Query: 619 LGWIRIAIRC-------NSQLGHPLLPCLQHDRL-VQLPKVENLKKVAILRPPAHQNSER 464
+G +R RC +S+LG P P L++ RL ++ ++E + + R Q +
Sbjct: 494 VGLVRGIERCTQVLGDISSELGGPDAPILEYARLRARIAEMERAQSF-VFRLQRKQAAND 552

Query: 463 ISKVFREPDVLNLLVLVKHGKHGGCSIWLNWRFDST 356
+ R D++ + HG+HGG ++ L DS+
Sbjct: 553 VLAALRRGDIIT----ITHGRHGGLAVVLESARDSS 584


>sp|Q8RP17|HOPW1_PSEYM Effector protein hopW1-1 OS=Pseudomonas
syringae pv. maculicola GN=hopW1-1 PE=3 SV=1
Length = 774

Score = 31.6 bits (70), Expect = 4.1
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -1

Query: 595 RCNSQLGHPLLPCLQHDRLVQLPKVENLKKVAILRPPAHQNSERISKVFREPDVLNLLVL 416
RC SQL H +D L Q+ ENLK + + + E +KV PD+L L+ L
Sbjct: 116 RCKSQLAHTHASDASYDPLAQV--CENLKTARLHQSISQMTGEAHAKVRGVPDLLALIQL 173


>sp|P32579|SUA5_YEAST Protein SUA5 OS=Saccharomyces cerevisiae
GN=SUA5 PE=1 SV=1
Length = 426

Score = 30.4 bits (67), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1

Query: 535 QLPKVENLKKVAILRPPAHQNSERISKVFREPDVLNLLVLVKHGKHGGCSIWLN 374
+L N+KK+AIL ++S+ SK+F EPD + +++ G I N
Sbjct: 327 ELKANSNIKKIAILTSLKLRDSDLQSKIFNEPDFSSKTFIIERLGQSGEEIQTN 380


tr_hit_id A8J3E4
Definition tr|A8J3E4|A8J3E4_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 117
Score (bit) 106.0
E-value 1.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949759|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_N15, 5'
(679 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8J3E4|A8J3E4_CHLRE Predicted protein OS=Chlamydomonas reinha... 106 1e-21
tr|A9SSQ0|A9SSQ0_PHYPA Predicted protein OS=Physcomitrella paten... 75 3e-12
tr|Q8DIK3|Q8DIK3_THEEB Tll1582 protein OS=Thermosynechococcus el... 73 1e-11
tr|B7JVS5|B7JVS5_SYNP8 Putative uncharacterized protein OS=Synec... 70 9e-11
tr|B4BVV8|B4BVV8_9CHRO Putative uncharacterized protein OS=Cyano... 70 9e-11
tr|Q3MCG3|Q3MCG3_ANAVT Putative uncharacterized protein OS=Anaba... 67 8e-10
tr|Q8YQ40|Q8YQ40_ANASP Alr3996 protein OS=Anabaena sp. (strain P... 67 1e-09
tr|A0YL03|A0YL03_9CYAN Putative uncharacterized protein OS=Lyngb... 66 2e-09
tr|B5W026|B5W026_SPIMA Putative uncharacterized protein OS=Arthr... 65 3e-09
tr|B7KBJ7|B7KBJ7_9CHRO Putative uncharacterized protein OS=Cyano... 63 2e-08
tr|Q10YM5|Q10YM5_TRIEI Putative uncharacterized protein OS=Trich... 63 2e-08
tr|Q5N4S2|Q5N4S2_SYNP6 Putative uncharacterized protein OS=Synec... 61 6e-08
tr|Q31PE9|Q31PE9_SYNE7 Putative uncharacterized protein OS=Synec... 61 6e-08
tr|B2J3U1|B2J3U1_NOSP7 Putative uncharacterized protein OS=Nosto... 61 6e-08
tr|B1XK00|B1XK00_SYNP2 Putative uncharacterized protein OS=Synec... 61 6e-08
tr|A0ZHA1|A0ZHA1_NODSP Putative uncharacterized protein OS=Nodul... 61 6e-08
tr|B1WU08|B1WU08_CYAA5 Putative uncharacterized protein OS=Cyano... 59 2e-07
tr|P73146|P73146_SYNY3 Slr1035 protein OS=Synechocystis sp. (str... 59 4e-07
tr|B4VMM0|B4VMM0_9CYAN Putative uncharacterized protein OS=Micro... 59 4e-07
tr|B4B1L4|B4B1L4_9CHRO Putative uncharacterized protein OS=Cyano... 58 5e-07
tr|A3IH80|A3IH80_9CHRO Putative uncharacterized protein OS=Cyano... 56 2e-06
tr|A8YP01|A8YP01_MICAE Similar to tr|Q8YQ40|Q8YQ40 OS=Microcysti... 55 5e-06
tr|B0JQ81|B0JQ81_MICAN Putative uncharacterized protein OS=Micro... 54 7e-06
tr|Q4C890|Q4C890_CROWT Putative uncharacterized protein OS=Croco... 51 6e-05
tr|B0CAH5|B0CAH5_ACAM1 Putative uncharacterized protein OS=Acary... 51 8e-05
tr|A4RRL3|A4RRL3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 47 9e-04
tr|A0ZGC5|A0ZGC5_NODSP Putative uncharacterized protein OS=Nodul... 45 0.003
tr|B7FKA6|B7FKA6_MEDTR Putative uncharacterized protein OS=Medic... 45 0.004
tr|B2IU22|B2IU22_NOSP7 Putative uncharacterized protein OS=Nosto... 44 0.009
tr|A7QHP5|A7QHP5_VITVI Chromosome chr8 scaffold_99, whole genome... 41 0.062

>tr|A8J3E4|A8J3E4_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_191510 PE=4 SV=1
Length = 488

Score = 106 bits (265), Expect = 1e-21
Identities = 48/117 (41%), Positives = 72/117 (61%)
Frame = +2

Query: 323 ELPINGFINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYC 502
++P+ IN+ G I P +V+A+ D+ +K+QY+G + DLRN+LR +GRRPE
Sbjct: 90 DIPLASVINTSGMILPETPEGARGAVYAIYDEKQKLQYVGTTTDLRNALRAALGRRPEKT 149

Query: 503 YFFKVFNLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVDAGSISERGK 673
+++K +L D + R W SE G P+GN +R W+QPVDAG+ISERG+
Sbjct: 150 HYYKAAHLPTADTPALQAVRDAWFSECGGQPNGNRLAIERTMWQQPVDAGAISERGR 206


>tr|A9SSQ0|A9SSQ0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_166355 PE=4 SV=1
Length = 307

Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
++ G I EP AS++A+ D+NK + +IG S+ + S+R+ RRP CY+ KV
Sbjct: 123 YLTEEGHIADCTEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVM 182

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
++ + +A++ R W+SE G P GN + + WE +D
Sbjct: 183 HVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALD 224


>tr|Q8DIK3|Q8DIK3_THEEB Tll1582 protein OS=Thermosynechococcus
elongatus (strain BP-1) GN=tll1582 PE=4 SV=1
Length = 177

Score = 73.2 bits (178), Expect = 1e-11
Identities = 38/108 (35%), Positives = 62/108 (57%)
Frame = +2

Query: 323 ELPINGFINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYC 502
ELP++ +I+ GR+ P ++ A ++A+ D VQYIG+S+D+R SL + R P+ C
Sbjct: 10 ELPLHPYIDGSGRVAPDLKG--AIGLYAIFDAAGSVQYIGYSRDMRLSLLQHLVRCPQGC 67

Query: 503 YFFKVFNLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
+K + D+ + +QQW++ELG P GN R+ WE +D
Sbjct: 68 SGYKAIAIERPDRPWLETVKQQWLAELGTVPLGND--RDRRQWENAID 113


>tr|B7JVS5|B7JVS5_SYNP8 Putative uncharacterized protein
OS=Synechococcus sp. (strain PCC 8801 / RF-1)
GN=PCC8801_0555 PE=4 SV=1
Length = 179

Score = 70.5 bits (171), Expect = 9e-11
Identities = 35/113 (30%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
+++++G + P E V+A+ D++KK+Q++G+S+D+ SL+ + R+ CY+ K+
Sbjct: 18 YLDNNGLL--PEEIVGKIGVYAIFDQDKKLQFVGYSRDIHLSLKQHLVRQINNCYWLKIQ 75

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVDAG-SISERGKS 676
+ + ++ Q +Q W++E G P GN+ + K W +P+DA S++E+ KS
Sbjct: 76 TISRPSRTILEQIKQAWLAENGTIPPGNAQ--EEKEWTEPIDAKLSMTEQEKS 126


>tr|B4BVV8|B4BVV8_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 8802 GN=Cyan8802DRAFT_0925 PE=4
SV=1
Length = 179

Score = 70.5 bits (171), Expect = 9e-11
Identities = 35/113 (30%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
+++++G + P E V+A+ D++KK+Q++G+S+D+ SL+ + R+ CY+ K+
Sbjct: 18 YLDNNGLL--PEEIVGKIGVYAIFDQDKKLQFVGYSRDIHLSLKQHLVRQINNCYWLKIQ 75

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVDAG-SISERGKS 676
+ + ++ Q +Q W++E G P GN+ + K W +P+DA S++E+ KS
Sbjct: 76 TISRPSRTILEQIKQAWLAENGTIPPGNAQ--EEKEWTEPIDAKLSMTEQEKS 126


>tr|Q3MCG3|Q3MCG3_ANAVT Putative uncharacterized protein OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_1701
PE=4 SV=1
Length = 181

Score = 67.4 bits (163), Expect = 8e-10
Identities = 31/102 (30%), Positives = 60/102 (58%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
+I+ +G++ P V+A+ D+ K +Q++G+S+D+ SLR + R+ ++CY+ K+
Sbjct: 18 YIDENGQL--PENYQEKIGVYAIFDQEKTLQFVGYSRDVYLSLRQHLVRQMQHCYWVKIQ 75

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
+ + V+ + W++E G P GN + Q++ W QPVD
Sbjct: 76 TIERPSRTVLENIEKAWIAENGTTPAGNGE--QKEIWTQPVD 115


>tr|Q8YQ40|Q8YQ40_ANASP Alr3996 protein OS=Anabaena sp. (strain PCC
7120) GN=alr3996 PE=4 SV=1
Length = 181

Score = 67.0 bits (162), Expect = 1e-09
Identities = 32/102 (31%), Positives = 60/102 (58%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
+I+ +G++ P V+A+ D+ K +Q++G+S+D+ SLR + R+ ++CY+ KV
Sbjct: 18 YIDENGQL--PENYQEKIGVYAIFDQEKTLQFVGYSRDVYLSLRQHLVRQLQHCYWVKVQ 75

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
+ + V+ + W++E G P GN + Q++ W QPVD
Sbjct: 76 TIERPSRTVLENIEKAWIAENGTTPVGNGE--QKEIWTQPVD 115


>tr|A0YL03|A0YL03_9CYAN Putative uncharacterized protein OS=Lyngbya
sp. PCC 8106 GN=L8106_09651 PE=4 SV=1
Length = 179

Score = 66.2 bits (160), Expect = 2e-09
Identities = 31/102 (30%), Positives = 60/102 (58%)
Frame = +2

Query: 341 FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVF 520
+IN G++ P V+A+ D ++ +QY+G+S+D+ SL+ + R+P+ CY+ KV
Sbjct: 18 YINEQGQL--PESLQGKIGVYAIFDADQVLQYVGYSRDIYLSLKQHLVRQPQGCYWVKVQ 75

Query: 521 NLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
+ + ++ + RQ W++E G P GN + ++ W QP++
Sbjct: 76 TIDRPSRTILEEIRQAWITENGSVPVGNGEQIEQ--WNQPIN 115


>tr|B5W026|B5W026_SPIMA Putative uncharacterized protein
OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_2118 PE=4 SV=1
Length = 179

Score = 65.5 bits (158), Expect = 3e-09
Identities = 31/112 (27%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +2

Query: 326 LPING-----FINSHGRIKPPVEPNTAASVFAVLDKNKKVQYIGFSKDLRNSLRVLMGRR 490
+P++G ++++ G++ P + V+A+ ++ +QY+G+S+D+ S++ + R
Sbjct: 8 IPLSGLEFIAYLDNSGKL--PESLSGKIGVYAIFNQQHILQYVGYSRDIFQSIKQHLVRE 65

Query: 491 PEYCYFFKVFNLRELDQAVMLQARQQWMSELGVAPDGNSDPTQRKFWEQPVD 646
PE CY+ KV + + ++ + R W++E G P GN++ + R W QP+D
Sbjct: 66 PEGCYWLKVQTINRPSRTLLEEIRDGWIAENGSVPPGNAEHSDR--WNQPID 115


>tr|B7KBJ7|B7KBJ7_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 7424 GN=PCC7424_4613 PE=4 SV=1
Length = 178

Score = 63.2 bits (152), Expect = 2e-08
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +2

Query: 398 VFAVLDKNKKVQYIGFSKDLRNSLRVLMGRRPEYCYFFKVFNLRELDQAVMLQARQQWMS 577
V+A+ D+NK ++++G+S+D+ SL+ + R+P+ CY+ K+ + ++ + Q W+
Sbjct: 34 VYAIFDQNKDLKFVGYSRDIYLSLKQHLVRQPQQCYWLKIHTITRPNRTQLEQICAYWIE 93

Query: 578 ELGVAPDGNSDPTQRKFWEQPVDA 649
E G P GN + +K W P+DA
Sbjct: 94 ENGKIPAGNDE--DKKNWTDPIDA 115