DK949770 |
Clone id |
TST38A01NGRL0006_O02 |
Library |
TST38 |
Length |
704 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_O02. 5' end sequence. |
Accession |
DK949770 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL286Contig1 |
Sequence |
GTCTCTTCCATCCCGGCAGAGAAGACGCAAGCAAGGCGATCATCTAGTAGGAGTAGCAGT AAGAAGAACATTACCATAAGCCCCGCCGAGCTTGTTCCCGGAGCCCAGTTCCCCGGCAAG GTTGTTGCCATCCAAACGTTCGGTGCATTTGTGGACTTTGGGGCTTTCACCAATGGGCTT GCTCACATCTCCAGATTGAGTAAATCTTATGTCAAGAAAGTAGAGGATGTGGTGCAGGTA GGGCAAGAAGTGAAGGTCCAGATTCTTGAGGTTGATTTTGAAGCCAACCGCATCTCACTC ATGCTGGTTGGGGAGGCAGAGGACGAAGCTCAGGAGGAAGAAGGAGACAAAGCTAAAGGA GGAGTGGGAGCCGAAAGAGCTTCTCAGCAGCAAGCACGGGCTCCTCGAAGGGATGCTTCG AGGCGAGCTCCGTCTCAAAGGAATGTGGCCACAACCAAATTGCAGAAAGGTGAAATTATT GTGGGAACTGTGAAGAACTTGATCAAATCGGGTGTGTTTATTGCCCTCCCCGATGGAACC GATGGGTATCTTCCAGTTCAGGAGGTTATTTTCAAGGTGCCGAATGCTGGCTTGGATGCG CAGTTTCAAGTTGGGGAGGAAGTCACAGTGAGGGTGCTTCGAGTAGAAAGAGGTCGGGTC AATCTCACCATGAAAAGGGAAGTCAATTTCGACAAGTTAAATGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P38494 |
Definition |
sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillus subtilis |
Align length |
156 |
Score (bit) |
74.3 |
E-value |
6.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949770|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_O02, 5' (704 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillu... 74 6e-13 sp|Q45388|TEX_BORPE Protein tex OS=Bordetella pertussis GN=tex P... 70 1e-11 sp|A3DCH7|PNP_CLOTH Polyribonucleotide nucleotidyltransferase OS... 66 2e-10 sp|P46837|YHGF_ECOLI Protein yhgF OS=Escherichia coli (strain K1... 66 2e-10 sp|A3M1M7|PNP_ACIBT Polyribonucleotide nucleotidyltransferase OS... 65 5e-10 sp|Q6FF12|PNP_ACIAD Polyribonucleotide nucleotidyltransferase OS... 65 5e-10 sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus s... 64 8e-10 sp|Q4L6I1|RS1_STAHJ 30S ribosomal protein S1 OS=Staphylococcus h... 64 1e-09 sp|A6LSR0|PNP_CLOB8 Polyribonucleotide nucleotidyltransferase OS... 64 1e-09 sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium le... 63 2e-09 sp|Q3YX77|PNP_SHISS Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q83JG0|PNP_SHIFL Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q0T0B7|PNP_SHIF8 Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q31W43|PNP_SHIBS Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q6D9A1|PNP_ERWCT Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|P05055|PNP_ECOLI Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|B1IQV7|PNP_ECOLC Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|A8A4Y0|PNP_ECOHS Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q8X9M3|PNP_ECO57 Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|A7ZS61|PNP_ECO24 Polyribonucleotide nucleotidyltransferase OS... 63 2e-09 sp|Q8NWM8|RS1_STAAW 30S ribosomal protein S1 OS=Staphylococcus a... 62 2e-09 sp|Q6G987|RS1_STAAS 30S ribosomal protein S1 OS=Staphylococcus a... 62 2e-09 sp|Q6GGT5|RS1_STAAR 30S ribosomal protein S1 OS=Staphylococcus a... 62 2e-09 sp|Q5HFU7|RS1_STAAC 30S ribosomal protein S1 OS=Staphylococcus a... 62 2e-09 sp|A8G911|PNP_SERP5 Polyribonucleotide nucleotidyltransferase OS... 62 2e-09 sp|Q65VB0|PNP_MANSM Polyribonucleotide nucleotidyltransferase OS... 62 2e-09 sp|Q1R6H4|PNP_ECOUT Polyribonucleotide nucleotidyltransferase OS... 62 2e-09 sp|Q8FD87|PNP_ECOL6 Polyribonucleotide nucleotidyltransferase OS... 62 2e-09 sp|Q0TCU5|PNP_ECOL5 Polyribonucleotide nucleotidyltransferase OS... 62 2e-09 sp|A1AG69|PNP_ECOK1 Polyribonucleotide nucleotidyltransferase OS... 62 2e-09
>sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillus subtilis GN=ypfD PE=1 SV=1 Length = 382
Score = 74.3 bits (181), Expect = 6e-13 Identities = 48/156 (30%), Positives = 73/156 (46%) Frame = +1
Query: 100 GAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVDF 279 G+ GKV + FGAFVD G +GL HIS+LS S+V+K DVV+ GQEVKV++L VD Sbjct: 188 GSVLDGKVQRLTDFGAFVDIGGI-DGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDR 246
Query: 280 EANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXXXXXXXXNVATTK 459 + RISL + N K Sbjct: 247 DNERISLSI-------------------------------------KDTLPGPWNQIGEK 269
Query: 460 LQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEV 567 ++ G+++ GTV+ L+ G F+ + G +G + + ++ Sbjct: 270 VKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQI 305
Score = 53.5 bits (127), Expect = 1e-06 Identities = 27/70 (38%), Positives = 42/70 (60%) Frame = +1
Query: 97 PGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVD 276 PG G V + +FGAFV+ GL HIS++S ++ +V++ GQ VKV++L+V+ Sbjct: 272 PGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVN 331
Query: 277 FEANRISLML 306 RISL + Sbjct: 332 ENEERISLSM 341
>sp|Q45388|TEX_BORPE Protein tex OS=Bordetella pertussis GN=tex PE=4 SV=2 Length = 791
Score = 69.7 bits (169), Expect = 1e-11 Identities = 34/73 (46%), Positives = 46/73 (63%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 +L PG G V + FGAFVD G +GL HIS L++ +VK DVV+VGQ V V++L Sbjct: 666 DLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTVTVKVL 725
Query: 268 EVDFEANRISLML 306 EVD R++L + Sbjct: 726 EVDVARKRVALTM 738
>sp|A3DCH7|PNP_CLOTH Polyribonucleotide nucleotidyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=pnp PE=3 SV=1 Length = 700
Score = 66.2 bits (160), Expect = 2e-10 Identities = 30/71 (42%), Positives = 51/71 (71%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 ++ PG F G+V+ + +FGAFV+F GL HIS+L K V++VED+V+VG ++ V+++ Sbjct: 619 DIEPGQVFLGRVIRVTSFGAFVEFLPGKEGLVHISKLDKKRVERVEDIVRVGDQILVKVI 678
Query: 268 EVDFEANRISL 300 E+D + R++L Sbjct: 679 EID-KQGRVNL 688
>sp|P46837|YHGF_ECOLI Protein yhgF OS=Escherichia coli (strain K12) GN=yhgF PE=1 SV=3 Length = 773
Score = 65.9 bits (159), Expect = 2e-10 Identities = 33/73 (45%), Positives = 44/73 (60%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 +L PG G V + FGAFVD G +GL HIS LS +V+ VV+ G VKV++L Sbjct: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706
Query: 268 EVDFEANRISLML 306 EVD + RI+L + Sbjct: 707 EVDLQRKRIALTM 719
>sp|A3M1M7|PNP_ACIBT Polyribonucleotide nucleotidyltransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=pnp PE=3 SV=2 Length = 697
Score = 64.7 bits (156), Expect = 5e-10 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +1
Query: 85 AELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQI 264 AE+ PG + GKV+ I FGAFV+ T+GL HIS++S + V DV++ GQEVKVQ+ Sbjct: 619 AEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNERIANVTDVLKEGQEVKVQV 678
Query: 265 LEVDFEANRISLML 306 +VD RI L + Sbjct: 679 QDVD-NRGRIKLTM 691
Score = 31.2 bits (69), Expect = 5.7 Identities = 12/39 (30%), Positives = 24/39 (61%) Frame = +1
Query: 451 TTKLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEV 567 T +++ G+I G V +++ G F+ + GTDG L + ++ Sbjct: 618 TAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQI 656
>sp|Q6FF12|PNP_ACIAD Polyribonucleotide nucleotidyltransferase OS=Acinetobacter sp. (strain ADP1) GN=pnp PE=3 SV=1 Length = 697
Score = 64.7 bits (156), Expect = 5e-10 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +1
Query: 85 AELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQI 264 AE+ PG + GKV+ I FGAFV+ T+GL HIS++S V V DV++ GQ+VKVQ+ Sbjct: 619 AEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNERVANVSDVLKEGQDVKVQV 678
Query: 265 LEVDFEANRISLML 306 +VD RI L + Sbjct: 679 ADVD-NRGRIKLSM 691
Score = 31.2 bits (69), Expect = 5.7 Identities = 12/39 (30%), Positives = 24/39 (61%) Frame = +1
Query: 451 TTKLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEV 567 T +++ G+I G V +++ G F+ + GTDG L + ++ Sbjct: 618 TAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQI 656
>sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1 Length = 393
Score = 63.9 bits (154), Expect = 8e-10 Identities = 44/156 (28%), Positives = 63/156 (40%) Frame = +1
Query: 100 GAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVDF 279 G GKV + FGAFVD G +GL H+S LS +VK EDVV +G+ V V+I VD Sbjct: 194 GDVIEGKVARLTNFGAFVDIGG-VDGLVHVSELSHEHVKSPEDVVSIGETVNVKIKSVDK 252
Query: 280 EANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXXXXXXXXNVATTK 459 ++ RISL + + Sbjct: 253 DSERISLSI-------------------------------------KDTLPSPFESIKGE 275
Query: 460 LQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEV 567 +G++I GTV L G F+ + G G + + E+ Sbjct: 276 FNEGDVIEGTVVRLANFGAFVEIKPGVQGLVHISEI 311
Score = 54.3 bits (129), Expect = 6e-07 Identities = 29/73 (39%), Positives = 40/73 (54%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 E G G VV + FGAFV+ GL HIS +S S++ + ++ GQ V V++L Sbjct: 275 EFNEGDVIEGTVVRLANFGAFVEIKPGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVL 334
Query: 268 EVDFEANRISLML 306 VD E RISL + Sbjct: 335 GVDVENERISLSI 347
>sp|Q4L6I1|RS1_STAHJ 30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1 Length = 392
Score = 63.5 bits (153), Expect = 1e-09 Identities = 34/69 (49%), Positives = 43/69 (62%) Frame = +1
Query: 100 GAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVDF 279 G GKV + FGAFVD G +GL H+S LS +V EDVV VGQEV V++ V+ Sbjct: 194 GDVIKGKVARLTNFGAFVDIGG-VDGLVHVSELSHEHVDSPEDVVSVGQEVDVKVKSVEK 252
Query: 280 EANRISLML 306 +A RISL + Sbjct: 253 DAERISLSI 261
Score = 52.8 bits (125), Expect = 2e-06 Identities = 26/64 (40%), Positives = 39/64 (60%) Frame = +1
Query: 115 GKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRI 294 GKVV + FGAFV+ GL HIS ++ ++ + ++ GQ+V V+IL +D E RI Sbjct: 284 GKVVRLANFGAFVEIAPGVQGLVHISEIAHEHIGTPGEKLEPGQQVNVKILGIDEENERI 343
Query: 295 SLML 306 SL + Sbjct: 344 SLSI 347
>sp|A6LSR0|PNP_CLOB8 Polyribonucleotide nucleotidyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pnp PE=3 SV=1 Length = 701
Score = 63.5 bits (153), Expect = 1e-09 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 E+ G + GKV I TFGAFV+ GL HIS+L+K V KVEDVV +G E+ V++ Sbjct: 617 EVKAGEVYLGKVTKITTFGAFVEILPSKEGLVHISKLAKERVNKVEDVVSIGDEILVKVT 676
Query: 268 EVDFEANRISL 300 E+D RI+L Sbjct: 677 EID-NQGRINL 686
>sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA PE=3 SV=2 Length = 481
Score = 62.8 bits (151), Expect = 2e-09 Identities = 34/73 (46%), Positives = 46/73 (63%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 +L GA G V +I FGAFVD G +GL H+S LS ++ +VVQVG EV V++L Sbjct: 205 QLQKGAIRKGVVSSIVNFGAFVDLGG-VDGLVHVSELSWKHIDHPSEVVQVGNEVTVEVL 263
Query: 268 EVDFEANRISLML 306 +VD + R+SL L Sbjct: 264 DVDMDRERVSLSL 276
Score = 57.0 bits (136), Expect = 1e-07 Identities = 29/69 (42%), Positives = 41/69 (59%) Frame = +1
Query: 100 GAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQILEVDF 279 G PGKV + FGAFV GL HIS L++ +V+ + VV VG + V+++++D Sbjct: 294 GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDL 353
Query: 280 EANRISLML 306 E RISL L Sbjct: 354 ERRRISLSL 362
Score = 30.4 bits (67), Expect = 9.7 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +1
Query: 457 KLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEVIFK 576 +LQKG I G V +++ G F+ L G DG + V E+ +K Sbjct: 205 QLQKGAIRKGVVSSIVNFGAFVDL-GGVDGLVHVSELSWK 243
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PEK9 |
Definition |
tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
206 |
Score (bit) |
119.0 |
E-value |
2.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949770|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_O02, 5' (704 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genom... 119 2e-25 tr|Q9SZD6|Q9SZD6_ARATH Elongation factor Ts OS=Arabidopsis thali... 117 6e-25 tr|Q93ZG6|Q93ZG6_ARATH AT4g29060/F19B15_90 (Putative uncharacter... 117 6e-25 tr|Q5QEA9|Q5QEA9_ARATH Elongation factor Ts OS=Arabidopsis thali... 117 6e-25 tr|Q0WVD2|Q0WVD2_ARATH Elongation factor Ts (Fragment) OS=Arabid... 117 6e-25 tr|A9RZ32|A9RZ32_PHYPA Elongation factor Ts (Fragment) OS=Physco... 108 4e-22 tr|A9SG13|A9SG13_PHYPA Elongation factor Ts OS=Physcomitrella pa... 104 5e-21 tr|Q2QP54|Q2QP54_ORYSJ Elongation factor Ts OS=Oryza sativa subs... 99 2e-19 tr|A2ZLC1|A2ZLC1_ORYSI Elongation factor Ts OS=Oryza sativa subs... 99 2e-19 tr|A9SG12|A9SG12_PHYPA Predicted protein OS=Physcomitrella paten... 91 9e-17 tr|Q5QEB2|Q5QEB2_CHLRE Elongation factor Ts OS=Chlamydomonas rei... 78 5e-13 tr|Q5QEB1|Q5QEB1_CHLRE Plastid-specific ribosomal protein-7 OS=C... 78 5e-13 tr|Q5QEB0|Q5QEB0_CHLRE Chloroplast polyprotein of elongation fac... 78 5e-13 tr|A8J641|A8J641_CHLRE Plastid-specific ribosomal protein 7 OS=C... 78 5e-13 tr|A8J639|A8J639_CHLRE Polyprotein of PSRP-7 and EF-Ts, splice v... 78 5e-13 tr|A8J637|A8J637_CHLRE Elongation factor Ts OS=Chlamydomonas rei... 78 5e-13 tr|B0KBU5|B0KBU5_THEP3 RNA binding S1 domain protein OS=Thermoan... 76 2e-12 tr|B0K3L4|B0K3L4_THEPX RNA binding S1 domain protein OS=Thermoan... 76 2e-12 tr|Q01BN8|Q01BN8_OSTTA Chloroplast polyprotein of elongation fac... 76 2e-12 tr|A9B5U0|A9B5U0_HERA2 RNA binding S1 domain protein OS=Herpetos... 76 2e-12 tr|B8FHU3|B8FHU3_9DELT RNA binding S1 domain protein OS=Desulfat... 76 2e-12 tr|A7D078|A7D078_9BACT RNA binding S1 domain protein (Fragment) ... 76 2e-12 tr|Q11LK4|Q11LK4_MESSB RNA binding S1 OS=Mesorhizobium sp. (stra... 73 2e-11 tr|B8G7S3|B8G7S3_9CHLR RNA binding S1 domain protein OS=Chlorofl... 73 2e-11 tr|Q039G5|Q039G5_LACC3 SSU ribosomal protein S1P OS=Lactobacillu... 72 3e-11 tr|B3WE79|B3WE79_LACCB 30S Ribosomal protein S1 OS=Lactobacillus... 72 3e-11 tr|Q47CF7|Q47CF7_DECAR RNA binding S1 OS=Dechloromonas aromatica... 72 3e-11 tr|B5QPD9|B5QPD9_LACRH 30S ribosomal protein S1 OS=Lactobacillus... 72 3e-11 tr|Q0KBQ7|Q0KBQ7_RALEH Transcriptional accessory protein OS=Rals... 72 5e-11 tr|B3R4R7|B3R4R7_CUPTR Transcriptional accessory protein OS=Cupr... 72 5e-11
>tr|A7PEK9|A7PEK9_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016702001 PE=4 SV=1 Length = 553
Score = 119 bits (298), Expect = 2e-25 Identities = 77/206 (37%), Positives = 104/206 (50%), Gaps = 1/206 (0%) Frame = +1
Query: 88 ELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVKVQIL 267 ELVPGA F GKV +IQ FGAF+DFGAFT+GL H+SRLS SYVK V ++V +GQEVKV+++ Sbjct: 143 ELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVSRLSDSYVKDVGNIVSIGQEVKVRLV 202
Query: 268 EVDFEANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXXXXXXXXNV 447 E + E RISL + A Sbjct: 203 EANTETGRISLTM-------RDSDDPTKPQQQKDAASSSDKPRPSRRNTQRSNQRRDEVK 255
Query: 448 ATTKLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQEVIFK-VPNAGLDAQFQXXXXX 624 T+K KG+ + GTVKNL ++G FI+LP+G +G+LP E + N + Q Sbjct: 256 KTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGFGNLMGGSSLQVGQEV 315
Query: 625 XXXXXXXXXXXXNLTMKREVNFDKLN 702 LTMK+E + +KL+ Sbjct: 316 SVRVLRISRGQVTLTMKKEEDAEKLD 341
>tr|Q9SZD6|Q9SZD6_ARATH Elongation factor Ts OS=Arabidopsis thaliana GN=AT4g29060 PE=2 SV=1 Length = 953
Score = 117 bits (294), Expect = 6e-25 Identities = 71/187 (37%), Positives = 97/187 (51%) Frame = +1
Query: 4 SSIPAEKTQAXXXXXXXXXKKNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLA 183 S PA +Q+ + + ELVPGA F GKV AIQ FGAFVDFGAFT+GL Sbjct: 104 SDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLV 163
Query: 184 HISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXX 363 H+S+LS ++VK V VV +GQEVKV+++E D E+ RISL + Sbjct: 164 HVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESKRISLTM--------RENDDPPKRQS 215
Query: 364 VGAEXXXXXXXXXXXXXXXXXXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTD 543 G++ N +K KG+++ G VKNL +SG FI + +G + Sbjct: 216 GGSDKPRSGGKRDGSKGGGQRKGEGFN---SKFAKGQMLDGVVKNLTRSGAFITIGEGEE 272
Query: 544 GYLPVQE 564 G+LP E Sbjct: 273 GFLPTAE 279
>tr|Q93ZG6|Q93ZG6_ARATH AT4g29060/F19B15_90 (Putative uncharacterized protein At4g29060) OS=Arabidopsis thaliana GN=At4g29060 PE=2 SV=1 Length = 455
Score = 117 bits (294), Expect = 6e-25 Identities = 71/187 (37%), Positives = 97/187 (51%) Frame = +1
Query: 4 SSIPAEKTQAXXXXXXXXXKKNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLA 183 S PA +Q+ + + ELVPGA F GKV AIQ FGAFVDFGAFT+GL Sbjct: 104 SDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLV 163
Query: 184 HISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXX 363 H+S+LS ++VK V VV +GQEVKV+++E D E+ RISL + Sbjct: 164 HVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESKRISLTM--------RENDDPPKRQS 215
Query: 364 VGAEXXXXXXXXXXXXXXXXXXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTD 543 G++ N +K KG+++ G VKNL +SG FI + +G + Sbjct: 216 GGSDKPRSGGKRDGSKGGGQRKGEGFN---SKFAKGQMLDGVVKNLTRSGAFITIGEGEE 272
Query: 544 GYLPVQE 564 G+LP E Sbjct: 273 GFLPTAE 279
>tr|Q5QEA9|Q5QEA9_ARATH Elongation factor Ts OS=Arabidopsis thaliana PE=2 SV=1 Length = 710
Score = 117 bits (294), Expect = 6e-25 Identities = 71/187 (37%), Positives = 97/187 (51%) Frame = +1
Query: 4 SSIPAEKTQAXXXXXXXXXKKNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLA 183 S PA +Q+ + + ELVPGA F GKV AIQ FGAFVDFGAFT+GL Sbjct: 104 SDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLV 163
Query: 184 HISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXX 363 H+S+LS ++VK V VV +GQEVKV+++E D E+ RISL + Sbjct: 164 HVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESKRISLTM--------RENDDPPKRQS 215
Query: 364 VGAEXXXXXXXXXXXXXXXXXXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTD 543 G++ N +K KG+++ G VKNL +SG FI + +G + Sbjct: 216 GGSDKPRSGGKRDGSKGGGQRKGEGFN---SKFAKGQMLDGVVKNLTRSGAFITIGEGEE 272
Query: 544 GYLPVQE 564 G+LP E Sbjct: 273 GFLPTAE 279
>tr|Q0WVD2|Q0WVD2_ARATH Elongation factor Ts (Fragment) OS=Arabidopsis thaliana GN=At4g29060 PE=2 SV=1 Length = 631
Score = 117 bits (294), Expect = 6e-25 Identities = 71/187 (37%), Positives = 97/187 (51%) Frame = +1
Query: 4 SSIPAEKTQAXXXXXXXXXKKNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLA 183 S PA +Q+ + + ELVPGA F GKV AIQ FGAFVDFGAFT+GL Sbjct: 104 SDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLV 163
Query: 184 HISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXX 363 H+S+LS ++VK V VV +GQEVKV+++E D E+ RISL + Sbjct: 164 HVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESKRISLTM--------RENDDPPKRQS 215
Query: 364 VGAEXXXXXXXXXXXXXXXXXXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTD 543 G++ N +K KG+++ G VKNL +SG FI + +G + Sbjct: 216 GGSDKPRSGGKRDGSKGGGQRKGEGFN---SKFAKGQMLDGVVKNLTRSGAFITIGEGEE 272
Query: 544 GYLPVQE 564 G+LP E Sbjct: 273 GFLPTAE 279
>tr|A9RZ32|A9RZ32_PHYPA Elongation factor Ts (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_21938 PE=3 SV=1 Length = 854
Score = 108 bits (269), Expect = 4e-22 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 1/234 (0%) Frame = +1
Query: 4 SSIPAEKTQAXXXXXXXXXKKNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLA 183 S A+K Q K IT+ ++VPGA F G+V +Q +GAFVD GAFTNGL Sbjct: 4 SEASAKKMQRNSTMKGRAGGKTITVQKDQIVPGAVFTGRVRFVQPYGAFVDIGAFTNGLV 63
Query: 184 HISRLSKSYVKKVEDVVQVGQEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXX 363 H+S L+ YVK V D V+VGQEV V +LE++ ++ RI+L + Sbjct: 64 HVSELAPGYVKDVSDFVKVGQEVTVTVLEMNEKSKRIALTM--------RDRESEAAVPG 115
Query: 364 VGAEXXXXXXXXXXXXXXXXXXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPD-GT 540 G+ + +K +KGE++ GTVKN+I++G FI P+ G Sbjct: 116 DGSGKPTNQGKIAGRGNGGSRSNLKPKLRQSKAKKGEVLKGTVKNIIRNGAFIEFPEQGE 175
Query: 541 DGYLPVQEVIFKVPNAGLDAQFQXXXXXXXXXXXXXXXXXNLTMKREVNFDKLN 702 + +L EV N ++ LTMK +++ +N Sbjct: 176 EAFLRGSEVTEGGENVPIENLLTVGQEVTVRVLKIERGKAYLTMKPQIDMTAVN 229
>tr|A9SG13|A9SG13_PHYPA Elongation factor Ts OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129127 PE=3 SV=1 Length = 899
Score = 104 bits (260), Expect = 5e-21 Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 1/214 (0%) Frame = +1
Query: 64 KNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVG 243 K +T+ ++V GA F GKV ++Q++GAFVD GAFT+GL HIS L+ +VK+V DVV +G Sbjct: 53 KTLTVQKDQIVAGAVFTGKVRSVQSYGAFVDIGAFTDGLVHISELAPKFVKEVTDVVSIG 112
Query: 244 QEVKVQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXX 423 QEV V++LE++ +A RI+L + G+ Sbjct: 113 QEVTVRVLELNEKAGRIALTMRDRENEEEEQSSRPGSESSAGS----------------- 155
Query: 424 XXXXXXNVATTKLQKGEIIVGTVKNLIKSGVFIALPD-GTDGYLPVQEVIFKVPNAGLDA 600 + TKL+KGE + GTVKN+I++G FI + G + +L EV N ++ Sbjct: 156 GSGGEESGRPTKLKKGEELKGTVKNIIRNGAFIEFAEQGEEAFLRGSEVTEGGENVPMEN 215
Query: 601 QFQXXXXXXXXXXXXXXXXXNLTMKREVNFDKLN 702 LTMK +V+ +N Sbjct: 216 LLTVGQEVTVRVLKVERGKAYLTMKPQVDMTSVN 249
>tr|Q2QP54|Q2QP54_ORYSJ Elongation factor Ts OS=Oryza sativa subsp. japonica GN=Os12g0541500 PE=3 SV=1 Length = 1123
Score = 99.4 bits (246), Expect = 2e-19 Identities = 56/163 (34%), Positives = 82/163 (50%) Frame = +1
Query: 76 ISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVK 255 ++ +LVPGA F GKV +I+ FG FVD GAFT GL HISR+S +VK + + VGQEV Sbjct: 135 LNDEDLVPGASFTGKVRSIKPFGVFVDIGAFTEGLVHISRVSDGFVKDISSLFTVGQEVS 194
Query: 256 VQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXXXXXX 435 V+++E + E RISL + Sbjct: 195 VRLVEANKETGRISLTM---RTGGDYVKPKTETPKAASGGRNTTATTSRGSPRQTRERDE 251
Query: 436 XXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQE 564 ++ T +G+ + G VKN ++G F+ LPDG++G+LP +E Sbjct: 252 AKSMGETNYVQGQFLDGVVKNSTRAGSFVTLPDGSEGFLPREE 294
>tr|A2ZLC1|A2ZLC1_ORYSI Elongation factor Ts OS=Oryza sativa subsp. indica GN=OsI_38621 PE=3 SV=1 Length = 1123
Score = 99.4 bits (246), Expect = 2e-19 Identities = 56/163 (34%), Positives = 82/163 (50%) Frame = +1
Query: 76 ISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVGQEVK 255 ++ +LVPGA F GKV +I+ FG FVD GAFT GL HISR+S +VK + + VGQEV Sbjct: 135 LNDEDLVPGASFTGKVRSIKPFGVFVDIGAFTEGLVHISRVSDGFVKDISSLFTVGQEVS 194
Query: 256 VQILEVDFEANRISLMLVXXXXXXXXXXXXXXXXXXVGAEXXXXXXXXXXXXXXXXXXXX 435 V+++E + E RISL + Sbjct: 195 VRLVEANKETGRISLTM---RTGGDYVKPKTETPKAASGGRNTTATTSRGSPRQTRERDE 251
Query: 436 XXNVATTKLQKGEIIVGTVKNLIKSGVFIALPDGTDGYLPVQE 564 ++ T +G+ + G VKN ++G F+ LPDG++G+LP +E Sbjct: 252 AKSMGETNYVQGQFLDGVVKNSTRAGSFVTLPDGSEGFLPREE 294
>tr|A9SG12|A9SG12_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164715 PE=4 SV=1 Length = 421
Score = 90.5 bits (223), Expect = 9e-17 Identities = 42/81 (51%), Positives = 62/81 (76%) Frame = +1
Query: 64 KNITISPAELVPGAQFPGKVVAIQTFGAFVDFGAFTNGLAHISRLSKSYVKKVEDVVQVG 243 K +T+ ++V GA F GKV ++Q++GAFVD GAFT+GL HIS L+ +VK+V DVV +G Sbjct: 125 KTLTVQKDQIVAGAVFTGKVRSVQSYGAFVDIGAFTDGLVHISELAPKFVKEVTDVVSIG 184
Query: 244 QEVKVQILEVDFEANRISLML 306 QEV V++LE++ +A RI+L + Sbjct: 185 QEVTVRVLELNEKAGRIALTM 205
Score = 39.7 bits (91), Expect = 0.19 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = +1
Query: 445 VATTKLQKGEIIVGTVKNLIKSGVFIALPD-GTDGYLPVQEVIFKVPNAGLDAQFQXXXX 621 V TKL+KGE + GTVKN+I++G FI + G + +L EV N ++ Sbjct: 282 VGWTKLKKGEELKGTVKNIIRNGAFIEFAEQGEEAFLRGSEVTEGGENVPMENLLTVGQE 341
Query: 622 XXXXXXXXXXXXXNLTMKREVNFDKLN 702 LTMK +V+ +N Sbjct: 342 VTVRVLKVERGKAYLTMKPQVDMTSVN 368
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