DK949772
Clone id TST38A01NGRL0006_O04
Library
Length 696
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_O04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTGGTGCCTCGGTGTATTTGGTGTTGAGCTTCTGTGAAGGCGTCTTTGCACACGCCTCCT
GCAGGAGCTTAGCCTAACTTCTCGTCCGTCGCTCTTCCGGCTCCAGCGAAAATGAGAGAG
TGCATCTCCATCCACATTGGCCAGGCTGGGATTCAGGTCGGCAATGCCTGCTGGGAGCTT
TACTGTCTCGAACATGGCATCCAGCCAGATGGTCAGATGCCAAGTGACAAGACTGTTGGT
GGAGGAGATGATGCATTTAACACTTTTTTTAGTGAGACAGGGGCTGGGAAGCATGTGCCA
AGGGCCATCTTTGTGGACCTGGAGCCAACTGTGATTGATGAGGTGCGAACTGGCACCTAT
AGGCAGCTTTTCCACCCAGAGCAGCTCATAAGTGGCAAGGAGGATGCTGCCAACAACTTT
GCCCGTGGCCATTATACCATTGGTAAAGAGATTGTGGACCTCTGCCTTGATCGCATCCGC
AAATTGGCAGACAATTGCACAGGCCTGCAAGGTTTTCTTGTCTTTAATGCTGTGGGAGGT
GGCACAGGGTCTGGCTTAGGATCGTTGCTTCTTGAAAGGCTCTCAGTTGATTACGGTAAG
AAGTCCAAGCTGGGTTTTACTGTCTACCCTTCTCCGCANGTGTCAACCTCTGTTGTGGAA
CCATACAATAGTGTGCTCTCTACCCACTCTTTGCTG
■■Homology search results ■■ -
sp_hit_id P29510
Definition sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana
Align length 195
Score (bit) 323.0
E-value 4.0e-88
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949772|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_O04, 5'
(696 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsi... 323 4e-88
sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA... 322 1e-87
sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thalia... 322 1e-87
sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN... 322 1e-87
sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum... 322 2e-87
sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum... 322 2e-87
sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA ... 321 2e-87
sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUB... 320 5e-87
sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp... 320 6e-87
sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN... 319 1e-86
sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum... 319 1e-86
sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 ... 318 1e-86
sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 ... 318 1e-86
sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN... 318 1e-86
sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=... 318 2e-86
sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain OS=Chlorella vulgaris GN... 317 5e-86
sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis... 316 9e-86
sp|P41351|TBA_TETTH Tubulin alpha chain OS=Tetrahymena thermophi... 313 6e-85
sp|P10872|TBA_TETPY Tubulin alpha chain OS=Tetrahymena pyriformi... 313 6e-85
sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain OS=Chlamydomonas rein... 313 6e-85
sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox car... 313 6e-85
sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas rein... 313 6e-85
sp|P28287|TBA_OXYGR Tubulin alpha chain OS=Oxytricha granulifera... 308 1e-83
sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 ... 308 2e-83
sp|P07304|TBA1_STYLE Tubulin alpha-1 chain OS=Stylonychia lemnae... 308 2e-83
sp|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain OS=Arabidopsi... 305 2e-82
sp|P10873|TBA_TOXGO Tubulin alpha chain OS=Toxoplasma gondii PE=... 305 2e-82
sp|Q71G51|TBA_NEOCA Tubulin alpha chain OS=Neospora caninum GN=T... 305 2e-82
sp|Q40832|TBA2_PELFA Tubulin alpha-2 chain OS=Pelvetia fastigiat... 303 4e-82
sp|P28752|TBA1_ORYSJ Tubulin alpha-1 chain OS=Oryza sativa subsp... 303 4e-82

>sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
thaliana GN=TUBA2 PE=2 SV=1
Length = 450

Score = 323 bits (829), Expect = 4e-88
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA
PE=2 SV=1
Length = 450

Score = 322 bits (825), Expect = 1e-87
Identities = 160/195 (82%), Positives = 161/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana
GN=TUBA6 PE=2 SV=1
Length = 450

Score = 322 bits (825), Expect = 1e-87
Identities = 160/195 (82%), Positives = 161/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare
GN=TUBA3 PE=2 SV=1
Length = 451

Score = 322 bits (825), Expect = 1e-87
Identities = 160/195 (82%), Positives = 161/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum
PE=2 SV=1
Length = 450

Score = 322 bits (824), Expect = 2e-87
Identities = 160/195 (82%), Positives = 161/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum
PE=2 SV=1
Length = 450

Score = 322 bits (824), Expect = 2e-87
Identities = 160/195 (82%), Positives = 161/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA
PE=2 SV=1
Length = 451

Score = 321 bits (823), Expect = 2e-87
Identities = 159/195 (81%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1
PE=3 SV=1
Length = 452

Score = 320 bits (820), Expect = 5e-87
Identities = 159/195 (81%), Positives = 160/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp.
japonica GN=TUBA PE=2 SV=1
Length = 451

Score = 320 bits (819), Expect = 6e-87
Identities = 159/195 (81%), Positives = 160/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare
GN=TUBA2 PE=2 SV=1
Length = 451

Score = 319 bits (817), Expect = 1e-86
Identities = 158/195 (81%), Positives = 160/195 (82%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKL+DNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


tr_hit_id Q84UZ5
Definition tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii
Align length 195
Score (bit) 324.0
E-value 4.0e-87
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949772|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_O04, 5'
(696 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii G... 324 4e-87
tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii ... 323 5e-87
tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidop... 323 5e-87
tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1 323 5e-87
tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 P... 323 5e-87
tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 323 5e-87
tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Popul... 323 5e-87
tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila ... 323 5e-87
tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 323 6e-87
tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genom... 323 6e-87
tr|Q8VXD1|Q8VXD1_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 322 1e-86
tr|Q8VXC9|Q8VXC9_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 322 1e-86
tr|Q84XV0|Q84XV0_POPTM Alpha tubulin OS=Populus tremuloides PE=2... 322 1e-86
tr|Q84TK6|Q84TK6_POPTM Alpha-tubulin 1 OS=Populus tremuloides PE... 322 1e-86
tr|Q3EA24|Q3EA24_ARATH Uncharacterized protein At4g14960.1 OS=Ar... 322 1e-86
tr|Q38JI1|Q38JI1_SOLTU Putative uncharacterized protein OS=Solan... 322 1e-86
tr|Q1ZZV1|Q1ZZV1_BRACM Tubulin alpha-1 chain OS=Brassica rapa su... 322 1e-86
tr|A9PL16|A9PL16_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 322 1e-86
tr|A9PHZ8|A9PHZ8_POPTR Putative uncharacterized protein OS=Popul... 322 1e-86
tr|A9P817|A9P817_POPTR Putative uncharacterized protein OS=Popul... 322 1e-86
tr|A4K4Y4|A4K4Y4_WHEAT Alpha tubulin-3B (Alpha tubulin-3A) (Alph... 322 1e-86
tr|Q8VXD0|Q8VXD0_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 322 2e-86
tr|A9PL18|A9PL18_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 322 2e-86
tr|A5BZF5|A5BZF5_VITVI Putative uncharacterized protein (Chromos... 322 2e-86
tr|Q8H6L8|Q8H6L8_GOSHI Alpha-tubulin 4 (Fragment) OS=Gossypium h... 321 2e-86
tr|A9SEI4|A9SEI4_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86
tr|A7QH45|A7QH45_VITVI Chromosome chr3 scaffold_95, whole genome... 321 2e-86
tr|A5YRY0|A5YRY0_POPTM Alpha-tubulin 3 OS=Populus tremuloides PE... 321 2e-86
tr|Q93XB1|Q93XB1_ROSHC Alpha tubulin subunit OS=Rosa hybrid cult... 321 3e-86
tr|Q8H932|Q8H932_PHYPA Alpha tubulin OS=Physcomitrella patens GN... 321 3e-86

>tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii
GN=TUA1 PE=2 SV=1
Length = 450

Score = 324 bits (830), Expect = 4e-87
Identities = 162/195 (83%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii
var. menziesii GN=AT1 PE=3 SV=1
Length = 451

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
thaliana GN=At1g04820 PE=2 SV=1
Length = 450

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1
Length = 450

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 PE=2
SV=1
Length = 451

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA10
PE=2 SV=1
Length = 450

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 451

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila
PE=2 SV=1
Length = 450

Score = 323 bits (829), Expect = 5e-87
Identities = 161/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA6
PE=2 SV=1
Length = 450

Score = 323 bits (828), Expect = 6e-87
Identities = 160/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195


>tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00010650001
PE=3 SV=1
Length = 451

Score = 323 bits (828), Expect = 6e-87
Identities = 160/195 (82%), Positives = 162/195 (83%)
Frame = +1

Query: 112 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 291
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60

Query: 292 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 471
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 472 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFXXXXXXXXXXX 651
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGF
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 652 XXXXXNSVLSTHSLL 696
NSVLSTHSLL
Sbjct: 181 VVEPYNSVLSTHSLL 195