DK949781 |
Clone id |
TST38A01NGRL0006_O13 |
Library |
TST38 |
Length |
684 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_O13. 5' end sequence. |
Accession |
DK949781 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL57Contig1 |
Sequence |
CTGCCTTTCCGCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCTCCTC CTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTTCTGG CTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGTCGTC CGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTGAGCC CATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACATGACAGACATGATCAC CCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCATGTGCGTA TGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTAAGCCCAGG TGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAGCCCA CCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATACCTATGTTGTTATCAA GCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATGTGAA GCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAANGAGAATCGTGTAGCGGGTGT GGTCACAAATTGGGCTCTTGTGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
152 |
Score (bit) |
265.0 |
E-value |
1.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949781|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_O13, 5' (684 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 265 1e-70 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 264 3e-70 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 256 6e-68 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 253 9e-67 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 249 1e-65 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 204 5e-52 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 199 9e-51 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 194 5e-49 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 192 1e-48 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 189 9e-48 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 184 5e-46 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 106 1e-22 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 103 1e-21 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 100 1e-20 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 96 2e-19 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 96 2e-19 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 87 6e-17 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 84 5e-16 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 82 2e-15 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 81 5e-15 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 81 6e-15 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 80 8e-15 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 80 1e-14 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 77 9e-14 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 75 4e-13 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 75 4e-13 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 73 2e-12 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 72 2e-12 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 71 6e-12 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 71 6e-12
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 265 bits (678), Expect = 1e-70 Identities = 128/152 (84%), Positives = 142/152 (93%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 406 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 407 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 586 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 587 RPNVKLFNAVAAEDLIIXENRVAGVVTNWALV 682 RPNVKLFNAVAAEDLI+ RV GVVTNWALV Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 214
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 264 bits (675), Expect = 3e-70 Identities = 131/152 (86%), Positives = 142/152 (93%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 406 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 407 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 586 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 587 RPNVKLFNAVAAEDLIIXENRVAGVVTNWALV 682 RPNVKLFNAVAAEDLI+ NRV GVVTNWALV Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVVTNWALV 207
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 256 bits (655), Expect = 6e-68 Identities = 125/152 (82%), Positives = 137/152 (90%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 406 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 407 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 586 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 587 RPNVKLFNAVAAEDLIIXENRVAGVVTNWALV 682 RPNVKLFNAVA EDLI+ RV GVVTNWALV Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVVTNWALV 210
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 253 bits (645), Expect = 9e-67 Identities = 125/152 (82%), Positives = 136/152 (89%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 406 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 407 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 586 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 587 RPNVKLFNAVAAEDLIIXENRVAGVVTNWALV 682 RPNVKLFNAVA EDLI+ RV GVVTNWALV Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVVTNWALV 213
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 249 bits (636), Expect = 1e-65 Identities = 124/152 (81%), Positives = 137/152 (90%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 406 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 407 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 586 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 587 RPNVKLFNAVAAEDLIIXENRVAGVVTNWALV 682 RPNVKLFNAVAAEDLI+ RV GVVTNWALV Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 210
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 204 bits (518), Expect = 5e-52 Identities = 101/158 (63%), Positives = 127/158 (80%), Gaps = 6/158 (3%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 403 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 404 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 583 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 584 ARPNVKLFNAVAAEDLIIXE-----NRVAGVVTNWALV 682 A PNVKLFNA A EDLI+ E R+AGVVTNW LV Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLV 206
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 199 bits (507), Expect = 9e-51 Identities = 102/157 (64%), Positives = 121/157 (77%), Gaps = 5/157 (3%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 403 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 404 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 583 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 584 ARPNVKLFNAVAAEDLIIXEN----RVAGVVTNWALV 682 PN+KLFNA EDLI + R+AGVVTNW LV Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLV 200
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 194 bits (492), Expect = 5e-49 Identities = 99/157 (63%), Positives = 119/157 (75%), Gaps = 5/157 (3%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 403 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 404 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 583 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 584 ARPNVKLFNAVAAEDLIIXEN----RVAGVVTNWALV 682 PN KLFNA EDLI + R++GVVTNW LV Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLV 204
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 192 bits (488), Expect = 1e-48 Identities = 102/160 (63%), Positives = 125/160 (78%), Gaps = 8/160 (5%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 403 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 404 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 577 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 578 LLARPNVKLFNAVAAEDLII--XEN---RVAGVVTNWALV 682 +L+ PNVKLFNA A EDLI EN ++AGVV NW LV Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLV 207
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 189 bits (481), Expect = 9e-48 Identities = 96/159 (60%), Positives = 119/159 (74%), Gaps = 7/159 (4%) Frame = +2
Query: 227 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 403 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 404 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 583 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 584 ARPNVKLFNAVAAEDLII------XENRVAGVVTNWALV 682 PNVKLFNA EDL+ E VAGVVTNW LV Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLV 196
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
152 |
Score (bit) |
274.0 |
E-value |
4.0e-72 |
Report |
|