DK949798
Clone id TST38A01NGRL0006_P07
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_P07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CCTCGACCTACTGCCTATGTAGGAGTCTGAGGCTTTTCCTCAGATTTTCTTCCATGGTGT
AATGTCCTGTTAAGAAGATGCGAGAAAGTGTCCTTTTGGAAATTGTGCAGCAAGAGTCCC
ACTTGCTACCACCTGATTTGGGTTGTGATTGACCTTTATCCAAGTGGCTTCCGAGTCAAT
TTTATATTCTTGGTCTGTGGAGATACTGAGATTGCTCTGCTTATACAGGCTGACATGTTC
TTTTCACAGTGTTTACCGCAACAAGGTCCTAGCTTCCATGGATTTGGAGCTATAGGATGG
TTATGTTCATGTTTACATGATCATCCTTGGGATGATGAGGTAGTTAACTATGTCGGAGGC
AGAAAGGTTCATTTGGGATCTGTCACTTTCTCAGTAGTTTGATCCTTTAGTGGGGGAATT
GGTCTGTATTGGAGTCTTTATCTCTATGACCTCACTTGGCTTTATGTGGAGGGTGAGTGG
GAACTTTTTGCCATTCTCAATATTGGGTATTGAGGACGATTTTATTCTCATGGATGCAGG
ATTTTAATTCATGGTTTAGTCAATACTATGCATGATGGAGCTGATGGCTATATTGTCTTG
TGGGTGACTACCATTAGT
■■Homology search results ■■ -
sp_hit_id P30805
Definition sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anatinus
Align length 44
Score (bit) 33.9
E-value 0.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949798|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P07, 5'
(618 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anati... 34 0.70
sp|P08970|SUHW_DROME Protein suppressor of hairy wing OS=Drosoph... 30 7.6

>sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anatinus
GN=LALBA PE=1 SV=1
Length = 126

Score = 33.9 bits (76), Expect = 0.70
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1

Query: 244 SQCLPQQG-PSFHGFGAIGWLCSCLHDHPWDDEVVNYVGGRKVH 372
S+ L + G FHG WLC H+ +D + +NY G H
Sbjct: 9 SRVLKENGLGGFHGVSLEEWLCVIFHESGYDSQALNYYNGSSSH 52


>sp|P08970|SUHW_DROME Protein suppressor of hairy wing OS=Drosophila
melanogaster GN=su(Hw) PE=1 SV=2
Length = 941

Score = 30.4 bits (67), Expect = 7.6
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -3

Query: 256 VNTVKRTCQPV*--AEQSQYLHRPRI*N*LGSHLDKGQSQPKSGGSKWDSCCTISKRTLS 83
V T RT +PV AE + P + L H+D+G+ PK S S I +RT
Sbjct: 542 VKTHSRTKRPVFSCAECKRNFRTPAL---LKEHMDEGKHSPKQQRSSMRSAVKIMERTDC 598

Query: 82 RIFLTGHYTMEENLRKSLRLLH 17
I ++ + LR+ +R +H
Sbjct: 599 AI-CDKNFDSSDTLRRHIRTVH 619


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949798|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P07, 5'
(618 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******