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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949801
Clone id TST38A01NGRL0006_P10
Library
Length 596
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_P10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTGCCCGAGTAATGGATGCCGCCGGGAGAAGACGAAATGCTTTGCCAAAGGACCTTCAA
GCAGGATTAGATCTTGGTCTGGTTCCTCCGGAAGTGCTGAAGGACTTCTTTGATTTGGAC
AAACAGCCCTTTATTGCAGAGTTAACTAAGCATTTCCCGGTTACTTTCAACACACAACTA
GGTGTATTAACTGTATAAAAAGATGTTCTTTAGGTGCATCAAATGTGTATGCATGGGATT
GCTGCAAAGTATTTAATGAGTGTGAACTTTTGATATGGTTGCTTCTGGAGTTGGTGCTCA
AAATTTTCATCCTTTAGATTGTGACTGCCACTCGAGCAGGGTTTGCGCGAAAGATGGTTA
GCAGATCCTCGTTTTCTTCAAAGACTTGGAATTGAAGAGGCTATATCAATAACCACAACA
TTAATTGCTCAGTACGAACGGAGGAAAGGACGTTTCTTTCAGGAACTGGATTACGTCATA
ACTGACACAGTCCGGGGTGCTGTGGTCGACTTTTTTACTGTGTGGCTGCCTGCCCC
■■Homology search results ■■ -
sp_hit_id P43486
Definition sp|P43486|MCRB_STRLA Mitomycin resistance protein mcrB OS=Streptomyces lavendulae
Align length 46
Score (bit) 29.6
E-value 9.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949801|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P10, 5'
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43486|MCRB_STRLA Mitomycin resistance protein mcrB OS=Strept...    30   9.5  

>sp|P43486|MCRB_STRLA Mitomycin resistance protein mcrB
           OS=Streptomyces lavendulae GN=mcrB PE=4 SV=1
          Length = 105

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 367 RFLQRLGIEEAISITTT-LIAQYERRKGRFFQELDYVITDTVRGAV 501
           R+ +R+GI E   +     +  YER    F Q LD  + DTV  AV
Sbjct: 21  RYFERIGITEIAQLRDRDPVELYERMSAAFGQRLDPCLLDTVMSAV 66
tr_hit_id Q65WW4
Definition tr|Q65WW4|Q65WW4_ORYSJ Putative uncharacterized protein P0486C01.11 OS=Oryza sativa subsp. japonica
Align length 66
Score (bit) 120.0
E-value 4.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949801|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P10, 5'
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q65WW4|Q65WW4_ORYSJ Putative uncharacterized protein P0486C01...   120   4e-26
tr|B8AZC2|B8AZC2_ORYSI Putative uncharacterized protein OS=Oryza...   120   4e-26
tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza...   120   4e-26
tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomit...   117   3e-25
tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment) OS=Physcomit...   117   3e-25
tr|B4F9I8|B4F9I8_MAIZE Putative uncharacterized protein OS=Zea m...   117   4e-25
tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_1...   114   3e-24
tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert seque...   114   3e-24
tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g5614...   114   3e-24
tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza...   114   3e-24
tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza...   114   3e-24
tr|A7Q3Q9|A7Q3Q9_VITVI Chromosome chr13 scaffold_48, whole genom...   112   9e-24
tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis...   112   9e-24
tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family (...   110   3e-23
tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g4040...   110   3e-23
tr|A7NZN7|A7NZN7_VITVI Chromosome chr6 scaffold_3, whole genome ...    70   7e-11
tr|Q60E58|Q60E58_ORYSJ Os05g0388600 protein OS=Oryza sativa subs...    67   7e-10
tr|B6TD97|B6TD97_MAIZE Putative uncharacterized protein OS=Zea m...    67   7e-10
tr|A2Y485|A2Y485_ORYSI Putative uncharacterized protein OS=Oryza...    67   7e-10
tr|A8IDT3|A8IDT3_CHLRE Putative uncharacterized protein OS=Chlam...    63   8e-09
tr|B6SZH7|B6SZH7_MAIZE Putative uncharacterized protein OS=Zea m...    62   1e-08
tr|Q67YY5|Q67YY5_ARATH Putative uncharacterized protein At5g1247...    62   2e-08
tr|Q5JK51|Q5JK51_ORYSJ Putative uncharacterized protein OJ1294_F...    62   2e-08
tr|B8A9I3|B8A9I3_ORYSI Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|A7Q227|A7Q227_VITVI Chromosome chr13 scaffold_45, whole genom...    62   2e-08
tr|A3A1P1|A3A1P1_ORYSJ Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|A9SJU0|A9SJU0_PHYPA Predicted protein OS=Physcomitrella paten...    62   2e-08
tr|Q94CJ5|Q94CJ5_ARATH Putative uncharacterized protein At5g1247...    60   5e-08
tr|Q67YD5|Q67YD5_ARATH Putative uncharacterized protein At5g1247...    60   5e-08
tr|A9SU48|A9SU48_PHYPA Predicted protein OS=Physcomitrella paten...    52   1e-05

>tr|Q65WW4|Q65WW4_ORYSJ Putative uncharacterized protein P0486C01.11
           OS=Oryza sativa subsp. japonica GN=P0486C01.11 PE=4 SV=1
          Length = 587

 Score =  120 bits (301), Expect = 4e-26
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FLQRL IEEAISITTTL+AQYERRKGRFF+E+DYV+TDT+RG+VVDFF
Sbjct: 293 QGFRERLLADPKFLQRLAIEEAISITTTLLAQYERRKGRFFEEIDYVLTDTIRGSVVDFF 352

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 353 TVWLPA 358



 Score = 69.7 bits (169), Expect = 9e-11
 Identities = 32/51 (62%), Positives = 42/51 (82%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRR  ALP+DLQ G+DLG+V PE+L++FFDL+K P ++EL   F
Sbjct: 242 ARVMNAAGRRPEALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMSELIHRF 292


>tr|B8AZC2|B8AZC2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20317 PE=4 SV=1
          Length = 587

 Score =  120 bits (301), Expect = 4e-26
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FLQRL IEEAISITTTL+AQYERRKGRFF+E+DYV+TDT+RG+VVDFF
Sbjct: 293 QGFRERLLADPKFLQRLAIEEAISITTTLLAQYERRKGRFFEEIDYVLTDTIRGSVVDFF 352

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 353 TVWLPA 358



 Score = 69.7 bits (169), Expect = 9e-11
 Identities = 32/51 (62%), Positives = 42/51 (82%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRR  ALP+DLQ G+DLG+V PE+L++FFDL+K P ++EL   F
Sbjct: 242 ARVMNAAGRRPEALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMSELIHRF 292


>tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_018137 PE=4 SV=1
          Length = 1263

 Score =  120 bits (301), Expect = 4e-26
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +1

Query: 334  QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
            QG RER LADP+FLQRL IEEAISITTTL+AQYERRKGRFF+E+DYV+TDT+RG+VVDFF
Sbjct: 969  QGFRERLLADPKFLQRLAIEEAISITTTLLAQYERRKGRFFEEIDYVLTDTIRGSVVDFF 1028

Query: 514  TVWLPA 531
            TVWLPA
Sbjct: 1029 TVWLPA 1034



 Score = 69.7 bits (169), Expect = 9e-11
 Identities = 32/51 (62%), Positives = 42/51 (82%)
 Frame = +1

Query: 1    ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
            ARVM+AAGRR  ALP+DLQ G+DLG+V PE+L++FFDL+K P ++EL   F
Sbjct: 918  ARVMNAAGRRPEALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMSELIHRF 968


>tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_11257 PE=4 SV=1
          Length = 582

 Score =  117 bits (294), Expect = 3e-25
 Identities = 56/66 (84%), Positives = 62/66 (93%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QGLRERWLADPRFLQRL IEE+ISITTTL+AQYERR  RF+ E++YVITD+VRGAVVDFF
Sbjct: 346 QGLRERWLADPRFLQRLAIEESISITTTLLAQYERRGTRFWSEIEYVITDSVRGAVVDFF 405

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 406 TVWLPA 411



 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 37/52 (71%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPK-DLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVMDAAGRRR+ALP+ D+QAGL+ GLV PEVLK FF+LD+ P +AELT+ F
Sbjct: 294 ARVMDAAGRRRDALPQQDIQAGLERGLVDPEVLKSFFELDQHPIMAELTRRF 345


>tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_20837 PE=4 SV=1
          Length = 576

 Score =  117 bits (294), Expect = 3e-25
 Identities = 56/66 (84%), Positives = 62/66 (93%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QGLRERWLADPRFLQRL IEE+ISITTTL+AQYERR  RF+ E++YVITD+VRGAVVDFF
Sbjct: 342 QGLRERWLADPRFLQRLAIEESISITTTLLAQYERRGPRFWNEIEYVITDSVRGAVVDFF 401

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 402 TVWLPA 407



 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 38/51 (74%), Positives = 45/51 (88%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVMDAAGRRR+ALP+D+QAGL+ GLV PEVLK FF+LD+ P IAELT+ F
Sbjct: 291 ARVMDAAGRRRDALPQDIQAGLERGLVDPEVLKSFFELDEHPIIAELTRRF 341


>tr|B4F9I8|B4F9I8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 536

 Score =  117 bits (293), Expect = 4e-25
 Identities = 54/66 (81%), Positives = 62/66 (93%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FL RL IEEAISITTTL+AQYE+RKGRFF+E+DYV+TDT+RG+VVDFF
Sbjct: 260 QGFRERLLADPKFLNRLAIEEAISITTTLLAQYEKRKGRFFEEIDYVLTDTIRGSVVDFF 319

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 320 TVWLPA 325



 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRRR ALP+DLQ G+DLG+V PE+L++FFDL+K P +AEL   F
Sbjct: 209 ARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRF 259


>tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_100
           OS=Arabidopsis thaliana GN=F18O21_100 PE=4 SV=1
          Length = 755

 Score =  114 bits (285), Expect = 3e-24
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FL RL IEEAISITTTLIAQYE+RK  FF+E+DYVITDTVRG+VVDFF
Sbjct: 485 QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFF 544

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 545 TVWLPA 550



 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 10/61 (16%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALP----------KDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKH 150
           ARVM+AAGRRR+ALP          +D+Q GLDLGLV PEVL++ FDL++ P I+ELT+ 
Sbjct: 424 ARVMNAAGRRRDALPPNDGNLFHAFQDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR 483

Query: 151 F 153
           F
Sbjct: 484 F 484


>tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert sequence
           OS=Oryza sativa subsp. japonica GN=B1088C09.2 PE=2 SV=1
          Length = 723

 Score =  114 bits (285), Expect = 3e-24
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FL RL IEE ISITTTLIAQYE+RKGRF +E+DYV+TDT+RG+VVDFF
Sbjct: 448 QGFRERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFF 507

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 508 TVWLPA 513



 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRRR ALP+DLQ G+DLG+V PE+L++FFDL+K P +AEL   F
Sbjct: 397 ARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRF 447


>tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g56140
           (At3g56140) OS=Arabidopsis thaliana GN=At3g56140 PE=2
           SV=1
          Length = 745

 Score =  114 bits (285), Expect = 3e-24
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FL RL IEEAISITTTLIAQYE+RK  FF+E+DYVITDTVRG+VVDFF
Sbjct: 475 QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFF 534

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 535 TVWLPA 540



 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRRR+ALP D+Q GLDLGLV PEVL++ FDL++ P I+ELT+ F
Sbjct: 424 ARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRF 474


>tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04278 PE=4 SV=1
          Length = 723

 Score =  114 bits (285), Expect = 3e-24
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = +1

Query: 334 QGLRERWLADPRFLQRLGIEEAISITTTLIAQYERRKGRFFQELDYVITDTVRGAVVDFF 513
           QG RER LADP+FL RL IEE ISITTTLIAQYE+RKGRF +E+DYV+TDT+RG+VVDFF
Sbjct: 448 QGFRERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFF 507

Query: 514 TVWLPA 531
           TVWLPA
Sbjct: 508 TVWLPA 513



 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   ARVMDAAGRRRNALPKDLQAGLDLGLVPPEVLKDFFDLDKQPFIAELTKHF 153
           ARVM+AAGRRR ALP+DLQ G+DLG+V PE+L++FFDL+K P +AEL   F
Sbjct: 397 ARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRF 447