| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949806|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P15, 5'
(633 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 182 2e-45
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 178 2e-44
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 170 6e-42
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 170 6e-42
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 165 2e-40
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 164 3e-40
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 163 8e-40
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 160 7e-39
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 159 1e-38
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 139 9e-33
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 131 3e-30
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 105 1e-22
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 99 2e-20
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 97 5e-20
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 92 3e-18
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 89 2e-17
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 89 2e-17
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 89 2e-17
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14... 87 7e-17
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 86 2e-16
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 85 3e-16
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 85 4e-16
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 85 4e-16
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 84 8e-16
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 84 8e-16
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 84 8e-16
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 84 8e-16
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 84 8e-16
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 84 8e-16
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 83 1e-15
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233
Score = 182 bits (461), Expect = 2e-45
Identities = 94/169 (55%), Positives = 121/169 (71%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+ +SE+LAG+F G V++ EVIY++E+ RSRGFGFVTMS+VE+ A+E L+G D G
Sbjct: 64 YDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDG 123
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
R L VN + RAPR D S +++VGNL W VD L LFSEHGKV+ ARV
Sbjct: 124 RQLTVN---KAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARV 180
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
V+DRETGRSRGFGFVTMS+E+EVN A+ +DG ++GR +RVN+A ERP
Sbjct: 181 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERP 229
Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
KLFVGNL + VD L +F G V A V+ +RET RSRGFGFVTMST E +A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 448 MDGAAIEGRNLRVNMAGERPS----SRSDF 525
++G ++GR L VN A R S R DF
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDF 145
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 178 bits (452), Expect = 2e-44
Identities = 95/172 (55%), Positives = 127/172 (73%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+ NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+EK + D G
Sbjct: 159 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 218
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
R L VN RG P RAPR+ + + +++VGNL W VD+G L LFSEHGKV+EARV
Sbjct: 219 RLLTVN-KAAPRGSRPE-RAPRVYEP-AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARV 275
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 516
V DRETGRSRGFGFVTMS E+N+A++ +DG +EGR +RVN+A ERP R
Sbjct: 276 VYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRR 327
Score = 72.0 bits (175), Expect = 2e-12
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +1
Query: 100 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 261
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148
Query: 262 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 441
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 442 NKMDGAAIEGRNLRVNMAGERPS 510
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 315
Score = 170 bits (430), Expect = 6e-42
Identities = 90/175 (51%), Positives = 127/175 (72%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+ +SE LA +F++ G V++ EVIY++++ +SRGFGFVTMS+VE+ A+E + D G
Sbjct: 145 YDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNG 204
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
R L VN R RG+ P R PR + S +++VGN+ WG+DD L LFSEHGKV+ ARV
Sbjct: 205 RLLTVNKAAR-RGERPE-RPPRTFEQ-SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARV 261
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDF 525
V DRETGRSRGFGFVTM++EAE++ A+ +DG +++GR +RVN+A +R S R+ F
Sbjct: 262 VYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR-SRRNTF 315
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
KLFVGNL + VD L LF + G V A V+ +R+T +SRGFGFVTMST E +A+
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 448 MDGAAIEGRNLRVNMA---GERP 507
+ + GR L VN A GERP
Sbjct: 197 YNRYDVNGRLLTVNKAARRGERP 219
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276
Score = 170 bits (430), Expect = 6e-42
Identities = 90/169 (53%), Positives = 121/169 (71%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+ +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E D G
Sbjct: 106 YDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNG 165
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
R L VN RG P RAPR Q + +++VGN+ W +DD L +FSEHGKV+ ARV
Sbjct: 166 RLLTVN-KAAPRGSRPE-RAPRTFQP-TYRIYVGNIPWDIDDARLEQVFSEHGKVVSARV 222
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
V DRE+GRSRGFGFVTMS+EAE+++A+ +DG ++GR +RVN A ERP
Sbjct: 223 VFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERP 271
Score = 72.0 bits (175), Expect = 2e-12
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 109 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN--RNRGDAPTPRAPRMDQNNSNKLFVG 282
FV++ S ED NT + LD + G +FP+ G+ + P D KLFVG
Sbjct: 55 FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEEYQEPSEDA----KLFVG 102
Query: 283 NLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAA 462
NL + +D L LF + G V A V+ +RET RSRGFGFVTMST E ++A+
Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYD 162
Query: 463 IEGRNLRVNMAGERPS 510
+ GR L VN A R S
Sbjct: 163 LNGRLLTVNKAAPRGS 178
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273
Score = 165 bits (417), Expect = 2e-40
Identities = 89/176 (50%), Positives = 120/176 (68%), Gaps = 4/176 (2%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ +G + G
Sbjct: 96 FSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDG 155
Query: 181 RTLRVNF--PNRNRGDAPTPRAPRMDQN--NSNKLFVGNLAWGVDDGMLHDLFSEHGKVL 348
R LRVN P R ++ R + +SN+++VGNLAWGVD L LFSE GKV+
Sbjct: 156 RALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVV 215
Query: 349 EARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 516
+A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +RV+ A RP R
Sbjct: 216 DAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 271
Score = 76.3 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 448 MDGAAIEGRNLRVNMAGERPSSRSD 522
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289
Score = 164 bits (416), Expect = 3e-40
Identities = 88/188 (46%), Positives = 121/188 (64%), Gaps = 16/188 (8%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFGFVTMSSV + A ++ +G + G
Sbjct: 100 FNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDG 159
Query: 181 RTLRVNF----PNRNRGDAPTPRAP------------RMDQNNSNKLFVGNLAWGVDDGM 312
R LRVN P R G + PR+ + N+++VGNL+WGVDD
Sbjct: 160 RPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMA 219
Query: 313 LHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNM 492
L LFSE GKV+EARV+ DR++GRS+GFGFVT + EV A+ +DGA ++GR +RV+
Sbjct: 220 LESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSE 279
Query: 493 AGERPSSR 516
A RP R
Sbjct: 280 AEARPPRR 287
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 238 APRMDQNNSN--KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTM 411
AP +Q+ S KLFVGNL + VD L LF G V V+ D+ TGRSRGFGFVTM
Sbjct: 80 APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139
Query: 412 STEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDFF 528
S+ +EV A + +G ++GR LRVN AG P R D F
Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKREDGF 177
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279
Score = 163 bits (412), Expect = 8e-40
Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 15/187 (8%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ +G + G
Sbjct: 96 FSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDG 155
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNS---------------NKLFVGNLAWGVDDGML 315
R LRVN G P R + NS N+++VGNLAWGVD L
Sbjct: 156 RALRVN-----SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDAL 210
Query: 316 HDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMA 495
LFSE GKV++A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +RV+ A
Sbjct: 211 ETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 270
Query: 496 GERPSSR 516
RP R
Sbjct: 271 EARPPRR 277
Score = 76.3 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 448 MDGAAIEGRNLRVNMAGERPSSRSD 522
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291
Score = 160 bits (404), Expect = 7e-39
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 28/197 (14%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E+ A ++ +G + G
Sbjct: 96 FSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDG 155
Query: 181 RTLRVNFPNRNRGDAPTPRAPRM----------------------------DQNNSNKLF 276
R +RVN G AP R ++SN+++
Sbjct: 156 RAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVY 210
Query: 277 VGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDG 456
VGNL+WGVDD L +LFSE G V++A+VV DR++GRSRGFGFVT S+ EVN A++ ++G
Sbjct: 211 VGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNG 270
Query: 457 AAIEGRNLRVNMAGERP 507
++GR++RV+ A ERP
Sbjct: 271 VDLDGRSIRVSAAEERP 287
Score = 80.9 bits (198), Expect = 5e-15
Identities = 47/101 (46%), Positives = 59/101 (58%)
Frame = +1
Query: 220 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 399
D PR ++ KLFVGNL + VD L LF G V V+ D+ TGRSRGFG
Sbjct: 74 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131
Query: 400 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 522
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 171
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292
Score = 159 bits (401), Expect = 1e-38
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 28/197 (14%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E+ A ++ +G + G
Sbjct: 97 FSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDG 156
Query: 181 RTLRVNFPNRNRGDAPTPRAPRM----------------------------DQNNSNKLF 276
R +RVN G AP R ++SN+++
Sbjct: 157 RAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVY 211
Query: 277 VGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDG 456
VGNL+WGVDD L +LFSE G V++A+VV DR++GRSRGFGFVT S+ EVN A++ ++G
Sbjct: 212 VGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNG 271
Query: 457 AAIEGRNLRVNMAGERP 507
++GR++RV+ A ERP
Sbjct: 272 IDLDGRSIRVSAAEERP 288
Score = 79.0 bits (193), Expect = 2e-14
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = +1
Query: 220 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 399
D PR ++ KLFVGNL + VD L LF G V V+ D+ +GRSRGFG
Sbjct: 75 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132
Query: 400 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 522
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 172
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 324
Score = 139 bits (351), Expect = 9e-33
Identities = 70/174 (40%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S S +L+ +F + G+V VE++YD+ + RSRGF FVTM SVE+ AI DG+ G
Sbjct: 123 FSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGG 182
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQ------NNSNKLFVGNLAWGVDDGMLHDLFSEHGK 342
RT++VNFP RG + ++ ++ +KL+V NL+W + L D F++
Sbjct: 183 RTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPG 242
Query: 343 VLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGER 504
+ A+V+ DR +GRSRGFGF+T S+ +N AL+ M+ +EGR LR+N+AG++
Sbjct: 243 FMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296
Score = 67.8 bits (164), Expect = 5e-11
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
+L+VGNL + + L ++F+E G V +V DR T RSRGF FVTM + E +A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 448 MDGAAIEGRNLRVN 489
DG+ + GR ++VN
Sbjct: 175 FDGSQVGGRTVKVN 188
Score = 63.2 bits (152), Expect = 1e-09
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
W+ S+ L F +VIYD+ SGRSRGFGF+T SS E N+A++ ++ + G
Sbjct: 226 WALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEG 285
Query: 181 RTLRVNFPNRNRGDAPTP---RAPRMDQNNSNKL 273
R LR+N + + P +P D +NS L
Sbjct: 286 RPLRLNVAGQKAPVSSPPVVETSPENDSDNSELL 319
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949806|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_P15, 5'
(633 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 203 6e-51
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 191 4e-47
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 185 2e-45
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 184 3e-45
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 184 3e-45
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 184 3e-45
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 184 4e-45
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 183 9e-45
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 182 1e-44
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 181 3e-44
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 181 4e-44
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido... 178 2e-43
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia... 177 5e-43
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 176 8e-43
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 176 1e-42
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 176 1e-42
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 176 1e-42
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb... 172 2e-41
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c... 171 3e-41
tr|Q0Q6S3|Q0Q6S3_LILLO GRSF OS=Lilium longiflorum GN=GRSF PE=2 SV=1 170 8e-41
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 169 1e-40
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 169 1e-40
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1 168 2e-40
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1 167 5e-40
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul... 167 5e-40
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs... 166 8e-40
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza... 166 8e-40
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra... 166 8e-40
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo... 166 1e-39
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic... 166 1e-39
>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192
Score = 203 bits (517), Expect = 6e-51
Identities = 101/182 (55%), Positives = 136/182 (74%), Gaps = 10/182 (5%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
W C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+LDG D G
Sbjct: 9 WQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIERLDGHDVGG 68
Query: 181 RTLRVNFPN---------RNRGDAPTPRAPR-MDQNNSNKLFVGNLAWGVDDGMLHDLFS 330
R L+V+FP R G + RAPR +++ NK+FVGNL+WGVD+G L +LFS
Sbjct: 69 RPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDPNKVFVGNLSWGVDNGALQELFS 128
Query: 331 EHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPS 510
++GKV++ARVV DRE+GRSRGFGFVT S +EV+ A++ +DGA +GR LRVN+AG +P+
Sbjct: 129 DYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRVNLAGNKPA 188
Query: 511 SR 516
S+
Sbjct: 189 SK 190
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
KL++GNL W D L + E G V V+ D+E+GRSRGF FVTM+T+ + + +
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 448 MDGAAIEGRNLRVN 489
+DG + GR L+V+
Sbjct: 61 LDGHDVGGRPLKVS 74
>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
Length = 224
Score = 191 bits (484), Expect = 4e-47
Identities = 91/172 (52%), Positives = 123/172 (71%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
W+C+S +LA + G+VD+VEVIYDK SGRSRGF FVTM++ ED I LDG D G
Sbjct: 53 WTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINALDGTDMGG 112
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
R L+VN+P + D P ++++NKLFVGNL+WG D+ L+ FSE+G V++A+V
Sbjct: 113 RPLKVNYPQSQK-DKPRVERSERPRDDANKLFVGNLSWGCDEAALYSFFSEYGTVVDAKV 171
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 516
V DR++GRSRGFGFVTM + A N A+ +DGA ++GR LRVN+AGE+P +R
Sbjct: 172 VFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAGEKPPTR 223
Score = 73.9 bits (180), Expect = 7e-12
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +1
Query: 250 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 429
++ KL+VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM+T +
Sbjct: 39 EEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDA 98
Query: 430 NQALNKMDGAAIEGRNLRVNMAGERPSSRSD 522
+N +DG + GR L+VN P S+ D
Sbjct: 99 QAVINALDGTDMGGRPLKVNY----PQSQKD 125
>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 205
Score = 185 bits (469), Expect = 2e-45
Identities = 92/172 (53%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ AIE+ +G + G
Sbjct: 30 FSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQFNGYTFQG 89
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLE 351
R LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+
Sbjct: 90 RPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLD 149
Query: 352 ARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 150 AKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 448 MDGAAIEGRNLRVNMAGERPSSRSDF 525
+G +GR LRVN P R DF
Sbjct: 82 FNGYTFQGRPLRVNSG--PPPPRDDF 105
>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
japonica GN=P0519E12.113 PE=4 SV=1
Length = 264
Score = 184 bits (468), Expect = 3e-45
Identities = 91/172 (52%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+ +G + G
Sbjct: 89 FSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQG 148
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLE 351
R LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+
Sbjct: 149 RPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLD 208
Query: 352 ARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 209 AKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 448 MDGAAIEGRNLRVNMAGERPSSRSDF 525
+G +GR LRVN P R DF
Sbjct: 141 FNGYTFQGRPLRVNSG--PPPPRDDF 164
>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299
Score = 184 bits (468), Expect = 3e-45
Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 6/177 (3%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
WS +S ELA +F+ G V MVEVIYD+++GRSRGF FVTM++ D + A+EK +G +Y G
Sbjct: 122 WSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEKFNGYEYQG 181
Query: 181 RTLRVNFPNRNRGDAPTPRA------PRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGK 342
RTLRVN D+ PR P + N++N++FVGNL WG DD L LFS+HGK
Sbjct: 182 RTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGK 241
Query: 343 VLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 513
V+EA+VV DRETGRSRGFGFVT+S+ E+ +A++ +DG+ ++GR ++V +A +P+S
Sbjct: 242 VMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAETKPAS 298
Score = 85.1 bits (209), Expect = 3e-15
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL W VD L +LF + G V V+ DR+TGRSRGF FVTM+T+A+ ++A+ K
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 448 MDGAAIEGRNLRVNMAGERP 507
+G +GR LRVN P
Sbjct: 174 FNGYEYQGRTLRVNSGPPPP 193
>tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26976 PE=4 SV=1
Length = 259
Score = 184 bits (468), Expect = 3e-45
Identities = 91/172 (52%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+ +G + G
Sbjct: 84 FSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQG 143
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLE 351
R LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+
Sbjct: 144 RPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLD 203
Query: 352 ARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 204 AKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 255
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135
Query: 448 MDGAAIEGRNLRVNMAGERPSSRSDF 525
+G +GR LRVN P R DF
Sbjct: 136 FNGYTFQGRPLRVNSG--PPPPRDDF 159
>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
Length = 213
Score = 184 bits (467), Expect = 4e-45
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 7/179 (3%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
W+C+S +LA + + G+VD+VEVIYDK SGRSRGF FVTM+S +D I LDG+D G
Sbjct: 32 WTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINALDGSDMGG 91
Query: 181 RTLRVNFPNRNR-------GDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHG 339
R L+VNFP + +A P A R +++ NKLFVGN+ WG D+ + LFS +G
Sbjct: 92 RALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAAMTSLFSPYG 151
Query: 340 KVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 516
V++A++V DR++GRSRGFGFVTM + A+ +DG ++GR LRVN AGE+P SR
Sbjct: 152 SVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNFAGEKPPSR 210
Score = 74.7 bits (182), Expect = 4e-12
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +1
Query: 238 APRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 417
AP ++ +K++VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM++
Sbjct: 14 APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73
Query: 418 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 522
+ +N +DG+ + GR L+VN P S+ D
Sbjct: 74 HDDAQALINALDGSDMGGRALKVNF----PQSQKD 104
>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34983 PE=4 SV=1
Length = 194
Score = 183 bits (464), Expect = 9e-45
Identities = 90/186 (48%), Positives = 127/186 (68%), Gaps = 17/186 (9%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
W+C+S +LA + + SV+ V+V+YD++SGRSRGF FVTMS+ E + I++LDG+D+ G
Sbjct: 9 WTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDRLDGSDFGG 68
Query: 181 RTLRVNFP-------------NRNRGDAPTPRAPRMDQN----NSNKLFVGNLAWGVDDG 309
R L+V+FP N RGD + R PR + N+NK+F+GNL+W D
Sbjct: 69 RPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGNLSWSCDAD 128
Query: 310 MLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVN 489
L +FSE+G V++A+VV DR+TG+SRGFGFVTMS +EV+ A+ +DGA EGR +RV+
Sbjct: 129 ALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEFEGREMRVS 188
Query: 490 MAGERP 507
AGERP
Sbjct: 189 EAGERP 194
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
KL+VGNL W D L ++ + V VV D+++GRSRGF FVTMST +++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 448 MDGAAIEGRNLRVNMAGER 504
+DG+ GR L+V+ R
Sbjct: 61 LDGSDFGGRPLKVSFPQPR 79
>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 264
Score = 182 bits (463), Expect = 1e-44
Identities = 93/172 (54%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSVE+ A+++ +G G
Sbjct: 92 FSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDG 151
Query: 181 RTLRVNF---PNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLE 351
R+LRVN P R+R +P+P+ PR D +N+++VGNL+WGVD+ L +LFSE G+VLE
Sbjct: 152 RSLRVNSGPPPPRDRS-SPSPQRPRGD---ANRVYVGNLSWGVDNSALANLFSEQGEVLE 207
Query: 352 ARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 507
AR++ DRE+GRSRGFGFVT + EV A++ +DGA ++GR +RV +A +P
Sbjct: 208 ARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKP 259
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 268 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 447
++FVGNL + VD L LF + G V V+ D+ TGRSRGFGFVTMS+ EV A+++
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143
Query: 448 MDGAAIEGRNLRVNMAGERPSSRS 519
+G ++GR+LRVN P RS
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRS 167
>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
PE=4 SV=1
Length = 283
Score = 181 bits (459), Expect = 3e-44
Identities = 90/170 (52%), Positives = 122/170 (71%)
Frame = +1
Query: 1 WSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAG 180
+SC+S +LAG+ Q GS ++VEV+Y++++GRSRGF FVTMSSVEDCN IE LDG++Y G
Sbjct: 120 YSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGG 179
Query: 181 RTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARV 360
RTLRVNF D P P+ P + KLFVGNL+W V L+ +F E+G V+ ARV
Sbjct: 180 RTLRVNF-----SDKPKPKLP-LYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARV 233
Query: 361 VNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPS 510
+ D ETGRSRG+GFV ST+AE++ AL ++G +EGR +R+++A R S
Sbjct: 234 LYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +1
Query: 262 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 441
+ KL+ GNL + D L + +G V+ +R+TGRSRGF FVTMS+ + N +
Sbjct: 110 NTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 442 NKMDGAAIEGRNLRVNMA 495
+DG+ GR LRVN +
Sbjct: 170 ENLDGSEYGGRTLRVNFS 187
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