DK949808 |
Clone id |
TST38A01NGRL0006_P17 |
Library |
TST38 |
Length |
671 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_P17. 5' end sequence. |
Accession |
DK949808 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1189Contig1 |
Sequence |
GTAAATTTCGCGTAAGGCTTACTATCCACAATGGCGAGGGCCCTGGGATCTCTGCCCATA GCCTCGGCTGAGCCTTCTGTGGCACCATCTTGTTCCCTCCGTGCCTTCTCTCTCTCTAGT GAGCAGCTGACCTGCCTTCTGTCGTCTCCGAAATCGGCACACTCACGACGGAGATTGCAA TCTGCTCTGATTGTCGCCCATGGTAGCCCCACAGACAATGGCAATTCTGCAGATCAGATT GTGAGGAATGCTTCTTTGGCTTTTTACTGCGCTGTCAACCTCCTCTTTGACCTCCCCAGC GCTTGCTGTCTCTGCCGAGGACATTACGAATGCTCTATTGAAGGTGCAGGATGTGACTGA GAAAGCCACAAATGCAGTGGGAAGTGCTTATGGAACTTCGAAGTCTTTCATAGACCAGCT TTTCACGACAGTGAAACCCGCAGTCGATGCTGCGACTCCTTATGTTCAGAAGGCTACTGA TGCTGCCGTGCAGGTGGCTGCACCCATCGCATCTGATGTCGCATCGCAAGCTGATAAAGC CTTGAAGAATGCTGGTGTTGATACAAAACCTGTACTAGAAGCGGCCAAGACTGCAGCCGT TGTTGCGGGAGAGGCAGCTGAGCAAACCGCCNAGGTTATCGAAAGTGCGAAGCCGGTGGC ATCTAGTACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8PK53 |
Definition |
sp|Q8PK53|CCMA_XANAC Cytochrome c biogenesis ATP-binding export protein ccmA OS=Xanthomonas axonopodis pv. citri |
Align length |
114 |
Score (bit) |
38.9 |
E-value |
0.025 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0ZKA0 |
Definition |
tr|Q0ZKA0|Q0ZKA0_PTEVI Putative arsenate reductase OS=Pteris vittata |
Align length |
118 |
Score (bit) |
161.0 |
E-value |
3.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949808|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_P17, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0ZKA0|Q0ZKA0_PTEVI Putative arsenate reductase OS=Pteris vit... 161 3e-60 tr|A9NX62|A9NX62_PICSI Putative uncharacterized protein OS=Picea... 119 2e-25 tr|A9SZ30|A9SZ30_PHYPA Predicted protein OS=Physcomitrella paten... 97 7e-19 tr|A9TW76|A9TW76_PHYPA Predicted protein (Fragment) OS=Physcomit... 84 6e-15 tr|A9TL15|A9TL15_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 7e-11 tr|B0FPA3|B0FPA3_SOYBN Extracellular Ca2+ sensing receptor OS=Gl... 61 6e-08 tr|B0FPA4|B0FPA4_TOBAC Extracellular Ca2+ sensing receptor OS=Ni... 61 7e-08 tr|B6TVL4|B6TVL4_MAIZE Calcium sensing receptor OS=Zea mays PE=2... 58 5e-07 tr|A7PGK4|A7PGK4_VITVI Chromosome chr17 scaffold_16, whole genom... 57 1e-06 tr|Q9FN48|Q9FN48_ARATH Emb|CAB75797.1 (Extracellular calcium sen... 54 9e-06 tr|Q6YWR8|Q6YWR8_ORYSJ Os02g0729400 protein OS=Oryza sativa subs... 54 9e-06 tr|B8AI07|B8AI07_ORYSI Putative uncharacterized protein OS=Oryza... 54 9e-06 tr|A3AB00|A3AB00_ORYSJ Putative uncharacterized protein OS=Oryza... 54 9e-06 tr|Q6S3G1|Q6S3G1_ORYSA Extracellular calcium sensing receptor OS... 51 6e-05 tr|B2SLK3|B2SLK3_XANOP Heme ABC exporter, ATP-binding protein Cc... 39 0.39 tr|B6UEV9|B6UEV9_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.39 tr|B4VY23|B4VY23_9CYAN Putative uncharacterized protein OS=Micro... 38 0.66 tr|A3VW48|A3VW48_9RHOB Putative uncharacterized protein OS=Roseo... 38 0.66 tr|B6U7W7|B6U7W7_MAIZE Keratin-associated protein 5-4 OS=Zea may... 37 1.5 tr|B0RS79|B0RS79_XANCB Heme ABC transporter ATP-binding protein ... 36 1.9 tr|B4P1A6|B4P1A6_DROYA GE24367 OS=Drosophila yakuba GN=GE24367 P... 36 1.9 tr|Q8XVC9|Q8XVC9_RALSO Probable lipoprotein OS=Ralstonia solanac... 36 2.5 tr|B7RHE5|B7RHE5_9RHOB Mucin-associated surface protein OS=Roseo... 36 2.5 tr|B0W5A9|B0W5A9_CULQU Sentrin/sumo-specific protease senp7 OS=C... 36 2.5 tr|Q8EB46|Q8EB46_SHEON Sensor protein OS=Shewanella oneidensis G... 35 3.3 tr|Q6TE21|Q6TE21_VIBCH ORF1 protein OS=Vibrio cholerae PE=4 SV=1 35 3.3 tr|A1Z6S0|A1Z6S0_DROME CG33558, isoform A OS=Drosophila melanoga... 35 3.3 tr|Q9D2V3|Q9D2V3_MOUSE Putative uncharacterized protein OS=Mus m... 35 4.3 tr|Q544Y8|Q544Y8_MOUSE Granulin OS=Mus musculus GN=Grn PE=2 SV=1 35 4.3 tr|Q3UDD6|Q3UDD6_MOUSE Putative uncharacterized protein (Fragmen... 35 4.3
>tr|Q0ZKA0|Q0ZKA0_PTEVI Putative arsenate reductase OS=Pteris vittata PE=2 SV=1 Length = 435
Score = 161 bits (408), Expect(2) = 3e-60 Identities = 85/118 (72%), Positives = 93/118 (78%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 +DITNALLKVQDVT+KATNAVG AYGTSK FI+QLFTTVKPAVDAATPYVQKATDAAVQV Sbjct: 97 QDITNALLKVQDVTQKATNAVGGAYGTSKDFIEQLFTTVKPAVDAATPYVQKATDAAVQV 156
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A P+ASDV SQADKALKNAG+DT+PV+ IE AKPVA+ST Sbjct: 157 ATPLASDVVSQADKALKNAGLDTRPVVEAAKTAVVVAGEAAEQTAKVIEGAKPVATST 214
Score = 95.1 bits (235), Expect(2) = 3e-60 Identities = 51/83 (61%), Positives = 61/83 (73%) Frame = +1
Query: 31 MARALGSLPIASAEPSVAPSCSLRAFSLSSEQLTCLLSSPKSAHSRRRLQSALIVAHGSP 210 MARA GSLP ASAEPS A S +LR S+S EQL CLLS PKSAH R LQS+++VA + Sbjct: 1 MARAFGSLPTASAEPSAAYSSNLRLSSISGEQLNCLLSVPKSAHFCRTLQSSVVVAREAN 60
Query: 211 TDNGNSADQIVRNASLAFYCAVN 279 DNG+S DQ+VR ASLA A++ Sbjct: 61 ADNGSSLDQVVRTASLALLTALS 83
>tr|A9NX62|A9NX62_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 421
Score = 119 bits (298), Expect = 2e-25 Identities = 62/118 (52%), Positives = 76/118 (64%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 EDI L KV+D +K A SAYG SK FI+Q T+KPA+DAA PY+QKATD+AVQ+ Sbjct: 86 EDIVTTLTKVEDAYQKLERATSSAYGVSKDFIEQALKTMKPAMDAAMPYIQKATDSAVQI 145
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A+P+ASDV QA KAL++AGVD KPV+ IE AKPVAS+T Sbjct: 146 ASPVASDVTQQAQKALESAGVDPKPVVEAAKTAAVVAGGAAEQTTKAIEGAKPVASAT 203
>tr|A9SZ30|A9SZ30_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217313 PE=4 SV=1 Length = 435
Score = 97.4 bits (241), Expect = 7e-19 Identities = 50/118 (42%), Positives = 67/118 (56%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 +DI A KVQ VT + T GSA G K + QLFT VKPAV+ ATPY+Q+ D A + Sbjct: 94 DDIPGAFYKVQSVTSQVTQTAGSAVGVVKDALQQLFTIVKPAVEVATPYIQQTADTAYRA 153
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A P+A D+ QA+ AL+ AG+DT+P++ IE+A+P A ST Sbjct: 154 ALPVALDLEQQAENALQGAGIDTQPIVDAAKTVVSVTGEAVGQAENYIEAAQPYALST 211
>tr|A9TW76|A9TW76_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_151734 PE=4 SV=1 Length = 308
Score = 84.3 bits (207), Expect = 6e-15 Identities = 45/114 (39%), Positives = 62/114 (54%) Frame = +2
Query: 329 NALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQVAAPI 508 +ALL+++ + + + SK Q+FT+VKPAVD ATPYVQ+ D A + PI Sbjct: 1 SALLQMESIASQVAQTAVDVFNASKDVFQQVFTSVKPAVDVATPYVQQTADYAYKSVLPI 60
Query: 509 ASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A+D+ QA KAL++ G+DTKP L IESA+P SST Sbjct: 61 ATDLEKQAVKALQSNGIDTKPALDVAKTAVSVAGEAAGQAEKYIESAQPSISST 114
>tr|A9TL15|A9TL15_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_147134 PE=4 SV=1 Length = 309
Score = 70.9 bits (172), Expect = 7e-11 Identities = 31/79 (39%), Positives = 50/79 (63%) Frame = +2
Query: 341 KVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQVAAPIASDV 520 + Q+ +A+ G + K+ +Q+ +KPAV A TPY +++ D + +PIASD+ Sbjct: 2 QAQEAASQASRTAGDTFDVMKNVYEQIVYALKPAVSAVTPYAKQSADYVYKTVSPIASDL 61
Query: 521 ASQADKALKNAGVDTKPVL 577 QA+KAL++ GVDTKPV+ Sbjct: 62 EKQAEKALQSTGVDTKPVV 80
>tr|B0FPA3|B0FPA3_SOYBN Extracellular Ca2+ sensing receptor OS=Glycine max GN=cas PE=2 SV=1 Length = 398
Score = 61.2 bits (147), Expect = 6e-08 Identities = 33/118 (27%), Positives = 63/118 (53%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 + I ++L +V+ ++ T++ + + +KP ++ A P VQ+A + A+++ Sbjct: 73 DQIVSSLTQVEKTLDQVQEVGSGVLDTAQRIAEVIGNALKPGIETALPIVQQAGEEALKI 132
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A+P S+ + +A +AL+++GVDT+PV+ IE AKP+ASST Sbjct: 133 ASPAISEASKKAQEALQSSGVDTEPVI----SAAKTVADAAQQTTKVIEVAKPIASST 186
>tr|B0FPA4|B0FPA4_TOBAC Extracellular Ca2+ sensing receptor OS=Nicotiana tabacum GN=cas PE=2 SV=1 Length = 399
Score = 60.8 bits (146), Expect = 7e-08 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 EDI ++L +V+ +A + + + I + VKP VD A P V++A + ++ Sbjct: 74 EDIVSSLNQVESAVNQAQQVGSNIFDAASRVIGPIIEFVKPGVDVALPLVKQAGEEILKN 133
Query: 497 AAPIAS-DVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A+P+ S D +A +A+++AG+DT+PV+ IE AKP+ASST Sbjct: 134 ASPVISGDATKKAQEAMQSAGMDTQPVM----TAAKTVVDAAQQTSKVIEGAKPIASST 188
>tr|B6TVL4|B6TVL4_MAIZE Calcium sensing receptor OS=Zea mays PE=2 SV=1 Length = 395
Score = 58.2 bits (139), Expect = 5e-07 Identities = 39/117 (33%), Positives = 59/117 (50%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 ED+ +L K D +A + G A + + L VKPA+ P ++ A+D A+++ Sbjct: 64 EDVAGSLTKAVDTVSQAIDVGGKAAEQVAAVLKALGEAVKPAL----PVLKSASDEALKL 119
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASS 667 AAP+ S + QA +AL+ AGVD PVL I++AKPVAS+ Sbjct: 120 AAPVVSAASKQATEALQGAGVDPAPVL-------SVAKTAAEQSTKVIDAAKPVASA 169
>tr|A7PGK4|A7PGK4_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017591001 PE=4 SV=1 Length = 399
Score = 57.0 bits (136), Expect = 1e-06 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Frame = +2
Query: 323 ITNALLKVQDVTEKATNAVGSAY-GTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQVA 499 IT K+ ++ E VGS + T++ ++ + +KP +DAA P +++A + A ++A Sbjct: 78 ITEVEKKIDEIQE-----VGSGFLDTTQRILEVVANALKPGIDAAGPILKQAGEQASKIA 132
Query: 500 APIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 +P S+ + A++A++++G+DT P+L I+ AKP+ASST Sbjct: 133 SPAISEASKTAEEAIQSSGLDTAPIL----NAAKTVTEAAQQTTKLIQEAKPIASST 185
>tr|Q9FN48|Q9FN48_ARATH Emb|CAB75797.1 (Extracellular calcium sensing receptor) (Putative uncharacterized protein At5g23060) OS=Arabidopsis thaliana GN=CaS PE=2 SV=1 Length = 387
Score = 53.9 bits (128), Expect = 9e-06 Identities = 30/118 (25%), Positives = 60/118 (50%) Frame = +2
Query: 317 EDITNALLKVQDVTEKATNAVGSAYGTSKSFIDQLFTTVKPAVDAATPYVQKATDAAVQV 496 + I ++L +V+ + S + ++ + +KPA+D A P ++A + A+++ Sbjct: 64 DQIVSSLTEVEKTINQVQETGSSVFDATQRVFQVVGDALKPALDTALPIAKQAGEEAMKL 123
Query: 497 AAPIASDVASQADKALKNAGVDTKPVLXXXXXXXXXXXXXXXXXXXXIESAKPVASST 670 A+P S+ + +A +A++++G D++PV IE AKP+ASST Sbjct: 124 ASPAFSEASKKAQEAMQSSGFDSEPVF----NAAKTVTDVAQQTSKAIEDAKPIASST 177
|