DK949844
Clone id TST38A01NGRL0007_B07
Library
Length 357
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_B07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TTTAATTAGCGATTGATTAATTCTTATATTATGCATTATCCATTTGTGAAATCTATCGCA
TGCATGTAATTAGTGAGTGATTAATTCTTATTTATGCAACATCCATATGTTAATTATTAG
CAATTGATTAAATCTTATTTAAGCAGTTTCCTTAAGCATTGACACTTGTGCTTGTGCATA
TGCATGCAATACTGTCCACATGGCCTCTTCTGCATGGCTGTCCTGCCCAGCAATTTTTAA
TTTTGTGGATGCCTTTTGTAAGGAGAGGCTGGGAACAACTCATTTTGTTTGATTCTTTTG
ATGATTGATAGGCAGCGCATATATTATTTAATTGAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6PZE0
Definition sp|Q6PZE0|MUC19_MOUSE Mucin-19 OS=Mus musculus
Align length 60
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949844|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_B07, 5'
(334 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6PZE0|MUC19_MOUSE Mucin-19 OS=Mus musculus GN=Muc19 PE=2 SV=2 31 2.2
sp|P82765|LCR50_ARATH Putative low-molecular-weight cysteine-ric... 30 2.9
sp|A8X775|DLK1_CAEBR Mitogen-activated protein kinase kinase kin... 30 4.9
sp|Q5NVF6|PPAL_PONAB Lysosomal acid phosphatase OS=Pongo abelii ... 29 6.4
sp|Q4R5N9|PPAL_MACFA Lysosomal acid phosphatase OS=Macaca fascic... 29 6.4
sp|P11117|PPAL_HUMAN Lysosomal acid phosphatase OS=Homo sapiens ... 29 6.4
sp|P24638|PPAL_MOUSE Lysosomal acid phosphatase OS=Mus musculus ... 29 8.4

>sp|Q6PZE0|MUC19_MOUSE Mucin-19 OS=Mus musculus GN=Muc19 PE=2 SV=2
Length = 7524

Score = 30.8 bits (68), Expect = 2.2
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -1

Query: 322 ICAAYQSSKESNKMSCSQPLLTKGIHKIKNCWAGQPCRRGHVDSIACICTSTSVNA*GNC 143
+C ++ + E + MS SQ +L N W PC G S C+ T A NC
Sbjct: 528 LCGSFNNKAEDDFMS-SQNILESTAQAFANSWEMMPCSEGSPSS--CVSIETEKFAESNC 584


>sp|P82765|LCR50_ARATH Putative low-molecular-weight cysteine-rich
protein LCR50 OS=Arabidopsis thaliana GN=LCR50 PE=3 SV=1
Length = 83

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1

Query: 289 NKMSCSQPLLTKGI-HKIKNCWAGQPCRRGHVDSIACICTSTSVNA*GNCLN 137
+ + CS GI + K C+ PCR+G D C + S G C+N
Sbjct: 20 SSVHCSDDTQGFGIKQEYKQCYTPDPCRKGGNDECERFCVAKSGLLYGKCIN 71


>sp|A8X775|DLK1_CAEBR Mitogen-activated protein kinase kinase kinase
dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1
Length = 857

Score = 29.6 bits (65), Expect = 4.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1

Query: 169 CLCICMQYCPHGLFCMAVLPSN 234
C CI M+YCP G C + N
Sbjct: 122 CYCIVMEYCPKGQLCTVLRQKN 143


>sp|Q5NVF6|PPAL_PONAB Lysosomal acid phosphatase OS=Pongo abelii
GN=ACP2 PE=2 SV=1
Length = 423

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Frame = +3

Query: 201 WPLL-----HGCPAQQFLILWMPFVRRGWEQ 278
WPL H CP Q FL L P V + W+Q
Sbjct: 338 WPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQ 368


>sp|Q4R5N9|PPAL_MACFA Lysosomal acid phosphatase OS=Macaca
fascicularis GN=ACP2 PE=2 SV=1
Length = 423

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Frame = +3

Query: 201 WPLL-----HGCPAQQFLILWMPFVRRGWEQ 278
WPL H CP Q FL L P V + W+Q
Sbjct: 338 WPLSLPGCPHRCPLQDFLHLTEPVVPKDWQQ 368


>sp|P11117|PPAL_HUMAN Lysosomal acid phosphatase OS=Homo sapiens
GN=ACP2 PE=1 SV=3
Length = 423

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Frame = +3

Query: 201 WPLL-----HGCPAQQFLILWMPFVRRGWEQ 278
WPL H CP Q FL L P V + W+Q
Sbjct: 338 WPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQ 368


>sp|P24638|PPAL_MOUSE Lysosomal acid phosphatase OS=Mus musculus
GN=Acp2 PE=2 SV=2
Length = 423

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +3

Query: 201 WPLL-----HGCPAQQFLILWMPFVRRGWEQ 278
WPL+ H CP Q FL L P + + W++
Sbjct: 338 WPLILPGCPHRCPLQDFLRLTEPVIPKDWQK 368


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949844|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_B07, 5'
(334 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******