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NBDC - LSDB Archive
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DK949856
Clone id TST38A01NGRL0007_B19
Library
Length 655
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_B19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAGAAAGAAGGGATTTTGGAGAGAGAGAGAGAGAGGCAGGTAGAAAGTTCGAGCAGAGAG
ACACGTTAGATTAGTTTGCTCGCAGGTGAAAGATCGAGGAAAGTTAGTTGGCCAGCTCGC
TTCTGTGCATAGCTATGGCGGCAGCTGTAGCAAGCTCCTCTTCTGTCTCCTCTCTGCACA
GTGCCGCCCTGTGCCCGTCCTCCTCATCAGCAGCTTCTTCCTTGAAGTCCTGCCCCTCTC
TCTCCTTCGCCCCCTCCGATGGCTCTCGCCTTGTTTGCATGGCCACTAAGAAGGTCTCTT
CTCGGCCCTCCTCCGGCAAGAAGTCGTGGCTTCCCGGGGTTAGGGGAGGTGGCAACCTTG
TGGATCCTGAATGGCTTGATGGATCGCTTCCCGGCGACTATGGCTTTGATCCCCTTGGAC
TTGGAAAGGATCCAGCTGCCTTGAAATGGTACCGTGAGGCTGACATCATCCATGGAAGAT
GGGCAATGGCAGCTGTGGTGGGAATCTTTGTGGGGCAAGCATGGAGTGGAGTCCCCTGGT
TCGAAGCTGGAGCTCAACCTGGAGCAGTTGCTCCCTTCTCTTTCGGAACGCTGCTGGGTA
CTCAACTGTTGTTGATGGGATGGGTTGAGAGCAAGAGATGGGTTGACTTCTTTGA
■■Homology search results ■■ -
sp_hit_id P27524
Definition sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum
Align length 122
Score (bit) 213.0
E-value 9.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949856|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_B19, 5'
         (655 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   213   9e-55
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   206   7e-53
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   203   6e-52
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    97   1e-19
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    89   2e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    81   5e-15
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    80   1e-14
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    79   2e-14
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    75   3e-13
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    69   2e-11
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    67   1e-10
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    66   1e-10
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    65   3e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    65   4e-10
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    62   2e-09
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    62   2e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    62   3e-09
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    61   4e-09
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...    60   8e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    60   1e-08
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    60   1e-08
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    60   1e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    60   1e-08
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    60   1e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    60   1e-08
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    59   2e-08

>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  213 bits (541), Expect = 9e-55
 Identities = 94/122 (77%), Positives = 104/122 (85%)
 Frame = +3

Query: 288 KKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADI 467
           K+ +   ++ KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++
Sbjct: 42  KRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL 101

Query: 468 IHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVD 647
           IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVD
Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVD 161

Query: 648 FF 653
           FF
Sbjct: 162 FF 163


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  206 bits (525), Expect = 7e-53
 Identities = 91/120 (75%), Positives = 102/120 (85%)
 Frame = +3

Query: 294 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIH 473
           V++   + KKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREA++IH
Sbjct: 44  VAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 103

Query: 474 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           GRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 163


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  203 bits (517), Expect = 6e-52
 Identities = 89/120 (74%), Positives = 101/120 (84%)
 Frame = +3

Query: 294 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIH 473
           V +  ++ KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREA++IH
Sbjct: 49  VVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 108

Query: 474 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           GRWAM AV+GIFVGQAW+G+PWFEAGA PGAVAPFSF          MGWVESKRWVDFF
Sbjct: 109 GRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFF 168


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
 Frame = +3

Query: 261 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 440
           GSR V  A   V++ P   +  W PG         PEWLDGSLPGD+GFDPLGLG DP +
Sbjct: 50  GSRSV--AVSAVAADPD--RPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPES 99

Query: 441 LKWYREADIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXX 602
           LKW  +A+++H RWAM    GIF+ +  + +       W+ AG Q       +       
Sbjct: 100 LKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTL---FVI 156

Query: 603 XXXXMGWVESKRWVD 647
               +GW E +RW D
Sbjct: 157 ELVLIGWAEGRRWAD 171



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 378 DGSLPGDYGFDPLGLGK-DPAALKWYREADIIHGRWAMAAVVGIFVGQAWSG 530
           D   PG   FDPLG G   PA +K  R  +I +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
 Frame = +3

Query: 327 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAVVGI 506
           W PG         P WLDGSLPGD+GFDPLGL  DP +L+W ++A+++H RWAM    GI
Sbjct: 68  WFPGS------TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121

Query: 507 FVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVD 647
           F+ +  + +       W+ AG Q       +           +GW E +RW D
Sbjct: 122 FIPELLTKIGILNTPSWYTAGEQEYFTDTTTL---FIVELVLIGWAEGRRWAD 171



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 378 DGSLPGDYGFDPLGLGK-DPAALKWYREADIIHGRWAMAAVVGIFVGQAWSG 530
           D   PG   FDPLG G   PA +K  R  +I +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
 Frame = +3

Query: 282 ATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREA 461
           + K  S +  + K  WLPG      L  P++L GSL GD GFDPLGL +DP  LKW+ +A
Sbjct: 42  SAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQA 95

Query: 462 DIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGW 623
           ++++GRWAM  V G+ + + ++ +       W++AG +       S             +
Sbjct: 96  ELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHY 152

Query: 624 VESKRWVD 647
           VE +RW D
Sbjct: 153 VEIRRWQD 160


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
 Frame = +3

Query: 297 SSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHG 476
           S +  + K  WLPG      L  P +L GSLPGD GFDPLGL +DP  L+W+ +A++++G
Sbjct: 46  SFKVEAKKGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG 99

Query: 477 RWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKR 638
           RWAM  V G+ + + ++ +       W+ AG +    +  +             +VE +R
Sbjct: 100 RWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSH---YVEIRR 156

Query: 639 WVD 647
           W D
Sbjct: 157 WQD 159


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           K SWLPG++       P +LDGSL GD GFDPL L +DP  L+W+ +AD+++GRWAM  V
Sbjct: 33  KGSWLPGLQS------PAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGV 86

Query: 498 VGIFVGQAWSGVPWFEAG---AQPGAVAPFSFXXXXXXXXXXMGWVESKRWVD 647
            G+ + +  +      A      PG    F+             +VE +RW D
Sbjct: 87  AGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQD 139


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 327 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAVVGI 506
           W+PG         P +LDGS PGD+GFD LGLG+ PA L+ Y+E+++IH RWAM AV GI
Sbjct: 49  WMPGQPR------PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGI 102

Query: 507 FVGQAWSGVPWFEA---GAQPGAVAPF 578
            V +A     W +A    A PG  A +
Sbjct: 103 IVPEALGLGNWVKAQEWAAIPGGQATY 129



 Score = 37.7 bits (86), Expect = 0.053
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 405 FDPLGLGKDPAALKWYREADIIHGRWAMAAVVGIFVGQA 521
           FDPLG  KDPA  +  +  +I +GR A+ A+VG  V Q+
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 52/173 (30%), Positives = 71/173 (41%), Gaps = 55/173 (31%)
 Frame = +3

Query: 285 TKKVSSRPS----SGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGK-------- 428
           TKK S + +    S +  W PG +       PE+LDGSL GDYGFDP GLGK        
Sbjct: 37  TKKASPKKAKTVISDRPLWFPGAKS------PEYLDGSLVGDYGFDPFGLGKPAEYLQFD 90

Query: 429 ------------------------DPAA-----------LKWYREADIIHGRWAMAAVVG 503
                                   DP +           L+ +RE ++IHGRWAM A +G
Sbjct: 91  LDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLG 150

Query: 504 IFVGQAWSGVPWFEAG--------AQPGAVAPFSFXXXXXXXXXXMGWVESKR 638
               +  +GV W +AG        +  G   PFS           +G++E +R
Sbjct: 151 AITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR 203



 Score = 37.0 bits (84), Expect = 0.090
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = +3

Query: 390 PGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAVVGIFVGQAWSG 530
           PG   FDPLGL  DP      + A+I H R AM   +G  V  A +G
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261
tr_hit_id A9RU32
Definition tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 125
Score (bit) 218.0
E-value 2.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949856|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_B19, 5'
         (655 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella paten...   218   2e-55
tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromos...   212   2e-53
tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24 ...   210   5e-53
tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24 OS=P...   210   7e-53
tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Popul...   208   3e-52
tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II p...   207   3e-52
tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II p...   207   3e-52
tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II p...   207   3e-52
tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Popul...   207   3e-52
tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Popul...   207   3e-52
tr|B3VV84|B3VV84_POPTN Chloroplast light-harvesting complex II p...   206   1e-51
tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana GN=...   205   2e-51
tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding ...   205   2e-51
tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II p...   205   2e-51
tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa...   204   4e-51
tr|B3VV72|B3VV72_POPTN Chloroplast light-harvesting complex II p...   204   4e-51
tr|B3VV73|B3VV73_POPTN Chloroplast light-harvesting complex II p...   203   8e-51
tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II p...   201   4e-50
tr|B8PYF9|B8PYF9_9POAL Chloroplast a/b binding protein cab-PhE11...   195   2e-48
tr|B6T037|B6T037_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   192   1e-47
tr|Q7XV11|Q7XV11_ORYSJ Os04g0457000 protein OS=Oryza sativa subs...   191   3e-47
tr|Q41748|Q41748_MAIZE Chlorophyll a/b-binding apoprotein CP24 O...   191   3e-47
tr|B4FXB0|B4FXB0_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   191   3e-47
tr|A2XU61|A2XU61_ORYSI Putative uncharacterized protein OS=Oryza...   191   3e-47
tr|Q01JQ3|Q01JQ3_ORYSA H0523F07.10 protein OS=Oryza sativa GN=H0...   188   2e-46
tr|A3AUG3|A3AUG3_ORYSJ Putative uncharacterized protein OS=Oryza...   129   2e-28
tr|Q5BMR6|Q5BMR6_FRAAN Chloroplast chlorophyll a/b-binding prote...   123   9e-27
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul...   105   2e-21
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom...   104   5e-21
tr|A5BBT6|A5BBT6_VITVI Putative uncharacterized protein OS=Vitis...   104   5e-21

>tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_119427 PE=4 SV=1
          Length = 219

 Score =  218 bits (556), Expect = 2e-55
 Identities = 98/125 (78%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
 Frame = +3

Query: 279 MATKKVSSRPSSG-KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYR 455
           MATKKVS+RP++G KKSW+P V+GGGNL DPEWLDGSLPGDYGFDPLGLG+DPAALKWYR
Sbjct: 1   MATKKVSARPAAGGKKSWIPAVKGGGNLTDPEWLDGSLPGDYGFDPLGLGRDPAALKWYR 60

Query: 456 EADIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESK 635
           EA++IHGRWAMAAVVGIFVGQ WSGVPWFEAGA P A+APFSF          MGWVE+K
Sbjct: 61  EAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSLLGTQLLLMGWVETK 120

Query: 636 RWVDF 650
           RW+DF
Sbjct: 121 RWIDF 125


>tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_238, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00009554001 PE=4 SV=1
          Length = 257

 Score =  212 bits (539), Expect = 2e-53
 Identities = 95/112 (84%), Positives = 99/112 (88%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSWLPGV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 53  KKSWLPGVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGAVAPFSF          MGWVESKRWVDFF
Sbjct: 113 VGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFF 164


>tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24
           OS=Nicotiana tabacum GN=Lhcb6 PE=2 SV=1
          Length = 257

 Score =  210 bits (535), Expect = 5e-53
 Identities = 95/132 (71%), Positives = 110/132 (83%), Gaps = 2/132 (1%)
 Frame = +3

Query: 264 SRLVCMATKK--VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 437
           +R+  +AT K  + +  ++ KKSW+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPA
Sbjct: 33  ARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPA 92

Query: 438 ALKWYREADIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXM 617
            LKWYREA++IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          M
Sbjct: 93  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLM 152

Query: 618 GWVESKRWVDFF 653
           GWVESKRWVDFF
Sbjct: 153 GWVESKRWVDFF 164


>tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24
           OS=Phaseolus aureus GN=CipCp24 PE=2 SV=2
          Length = 258

 Score =  210 bits (534), Expect = 7e-53
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 54  KKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 113

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           +GIFVGQAWSGVPWFEAGA P A+APFSF          MGWVESKRWVDFF
Sbjct: 114 LGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFF 165


>tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  208 bits (529), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 99/112 (88%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           +GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 113 LGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 164


>tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  207 bits (528), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 98/112 (87%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFF 130


>tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  207 bits (528), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 98/112 (87%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFF 130


>tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  207 bits (528), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 98/112 (87%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFF 130


>tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 257

 Score =  207 bits (528), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 98/112 (87%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFF 164


>tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  207 bits (528), Expect = 3e-52
 Identities = 91/112 (81%), Positives = 98/112 (87%)
 Frame = +3

Query: 318 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREADIIHGRWAMAAV 497
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREA++IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 498 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 653
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFF 164