NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949864
Clone id TST38A01NGRL0007_C03
Library
Length 672
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_C03. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAATGCGCAAAGAGCGCTCCCACAGCAGAAGTAGGGACTATGAACGCCATGACAGGGAGA
AGTCTCGAGACATCGATCGAGAATATCGGTATTCTCGAGAGAAGCGGGAGAAGAAAGAGG
AGCCAGCAGCAGAACCAGAGGCTGATCCTGAGCGAGATCAAAGAACTGTTTTTGCGTTCC
AGGGAATGGTGGTCTTCTGGACGACTATCGTGAGTCTTCAAATCACACTTTCCCATACAG
GTGAATCTGGGATCTCCCTTGATTCATCGAGGTATAAGCTTTCCGTAACTTGTTGGAGTC
CTTTTCTTCGTGTCTTTGCCATTGTGCCAATGATTGCTTCATGCTTTTCTCTTTTATTGT
GTAGGCATATGGCTGAAGCTTTGCCTCAATGGCCTTTGTACTCCTATTTTTTTTCCTTCT
CCATTGAAACGTAATCGAAGTGAGTGTCTTTCTGCAGCACTTGCTGCCCACTAGAACCAA
TGTTATTGACTCACAGCACTGCGGATGAGGATTCTAGGTGCTGCACACCCTCATGCTTTC
ATGTCTTTGCATTCGATTGTCTCATTCAGGTTTTGCGGCCATTGGCTTTTCTGCCTTTCT
TGACCCATTACAGCTAGATCAATCAAATAACTTCTGAAAAAGGTGGATTCTGCCATGCCC
ATAGTATCTAGG
■■Homology search results ■■ -
sp_hit_id Q15077
Definition sp|Q15077|P2RY6_HUMAN P2Y purinoceptor 6 OS=Homo sapiens
Align length 77
Score (bit) 33.5
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949864|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C03, 5'
         (672 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q15077|P2RY6_HUMAN P2Y purinoceptor 6 OS=Homo sapiens GN=P2RY...    33   1.1  
sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3        33   1.4  
sp|Q5WVX6|GLND_LEGPL [Protein-PII] uridylyltransferase OS=Legion...    32   4.0  
sp|Q5ZUS2|GLND_LEGPH [Protein-PII] uridylyltransferase OS=Legion...    30   8.8  
sp|A5ICM0|GLND_LEGPC [Protein-PII] uridylyltransferase OS=Legion...    30   8.8  
sp|Q5X4J1|GLND_LEGPA [Protein-PII] uridylyltransferase OS=Legion...    30   8.8  
sp|Q9UJW3|DNM3L_HUMAN DNA (cytosine-5)-methyltransferase 3-like ...    30   8.8  

>sp|Q15077|P2RY6_HUMAN P2Y purinoceptor 6 OS=Homo sapiens GN=P2RY6
           PE=2 SV=1
          Length = 328

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +1

Query: 358 CVGIWLKLCLNGLCTPIFFPSPLKRNRSECLS---AALAAH*NQCY*LTALRMRILGAAH 528
           CV +WL +    L T IF  + ++RNR+ C      ALA H    Y    + + ++G   
Sbjct: 148 CVAVWLAVTTQCLPTAIFAATGIQRNRTVCYDLSPPALATH----YMPYGMALTVIGFLL 203

Query: 529 PH-AFMSLHSIVSFRFC 576
           P  A ++ + +++ R C
Sbjct: 204 PFAALLACYCLLACRLC 220


>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
          Length = 4061

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -3

Query: 559  QSNAKT*KHEGVQHLESSSAVL*VNNIGSSGQQVLQKDTH 440
            Q +A + +H G+ H ++SSAV    + GSSG QV   + H
Sbjct: 1362 QQSADSSRHSGIGHRQASSAVRDSGHRGSSGSQVTNSEGH 1401



 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 559  QSNAKT*KHEGVQHLESSSAVL*VNNIGSSGQQVLQKDTH 440
            Q +A + +H G+ H ++SSAV    + GSSG Q    + H
Sbjct: 2335 QQSADSSRHSGIGHGQASSAVRDSGHRGSSGSQASDSEGH 2374



 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 559  QSNAKT*KHEGVQHLESSSAVL*VNNIGSSGQQVLQKDTH 440
            Q +A + +H G+ H ++SSAV    + GSSG Q    + H
Sbjct: 3631 QQSADSSRHSGIGHGQASSAVRDSGHRGSSGSQASDSEGH 3670


>sp|Q5WVX6|GLND_LEGPL [Protein-PII] uridylyltransferase
           OS=Legionella pneumophila (strain Lens) GN=glnD PE=3
           SV=1
          Length = 861

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 25/113 (22%)
 Frame = +3

Query: 216 LQITLSHTGE-SGISLDSSRYKLSVTCWSPFLRVFAIVPMIASCFSL------------- 353
           + + + HT + S I L  ++ K    CW   L V   +  ++SC +L             
Sbjct: 78  IDLLILHTEKVSNIQLQRAQ-KFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMD 136

Query: 354 --LLCRHMA---------EALPQWPLYSYFFSFSIET*SK*VSFCSTCCPLEP 479
             LLC H A           L  WP + YFF+   E  S+   +  T   LEP
Sbjct: 137 MFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQSRYAKYGETAYNLEP 189


>sp|Q5ZUS2|GLND_LEGPH [Protein-PII] uridylyltransferase
           OS=Legionella pneumophila subsp. pneumophila (strain
           Philadelphia 1 / ATCC 33152 / DSM 7513) GN=glnD PE=3
           SV=1
          Length = 861

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 25/113 (22%)
 Frame = +3

Query: 216 LQITLSHTGE-SGISLDSSRYKLSVTCWSPFLRVFAIVPMIASCFSL------------- 353
           + + + HT + S I L  ++ K    CW   L V   +  ++SC +L             
Sbjct: 78  IDLLILHTEKVSNIQLQRAQ-KFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMD 136

Query: 354 --LLCRHMA---------EALPQWPLYSYFFSFSIET*SK*VSFCSTCCPLEP 479
             LLC H A           L  WP + YFF+   E  ++   +  T   LEP
Sbjct: 137 MFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQNRYAKYGETAYNLEP 189


>sp|A5ICM0|GLND_LEGPC [Protein-PII] uridylyltransferase
           OS=Legionella pneumophila (strain Corby) GN=glnD PE=3
           SV=1
          Length = 861

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 25/113 (22%)
 Frame = +3

Query: 216 LQITLSHTGE-SGISLDSSRYKLSVTCWSPFLRVFAIVPMIASCFSL------------- 353
           + + + HT + S I L  ++ K    CW   L V   +  ++SC +L             
Sbjct: 78  IDLLILHTEKVSNIQLQRAQ-KFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMD 136

Query: 354 --LLCRHMA---------EALPQWPLYSYFFSFSIET*SK*VSFCSTCCPLEP 479
             LLC H A           L  WP + YFF+   E  ++   +  T   LEP
Sbjct: 137 MFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQNRYAKYGETAYNLEP 189


>sp|Q5X4J1|GLND_LEGPA [Protein-PII] uridylyltransferase
           OS=Legionella pneumophila (strain Paris) GN=glnD PE=3
           SV=1
          Length = 861

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 25/113 (22%)
 Frame = +3

Query: 216 LQITLSHTGE-SGISLDSSRYKLSVTCWSPFLRVFAIVPMIASCFSL------------- 353
           + + + HT + S I L  ++ K    CW   L V   +  ++SC +L             
Sbjct: 78  IDLLILHTEKVSNIQLQRAQ-KFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMD 136

Query: 354 --LLCRHMA---------EALPQWPLYSYFFSFSIET*SK*VSFCSTCCPLEP 479
             LLC H A           L  WP + YFF+   E  ++   +  T   LEP
Sbjct: 137 MFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQNRYAKYGETAYNLEP 189


>sp|Q9UJW3|DNM3L_HUMAN DNA (cytosine-5)-methyltransferase 3-like
           OS=Homo sapiens GN=DNMT3L PE=1 SV=2
          Length = 387

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 447 SFCSTCCPLEPMLLTHSTADEDSRCCTPSCFHVFAFDCLIQVLRP 581
           S+CS CC  E +L+          C  P C   + F+C+  ++ P
Sbjct: 94  SYCSICCSGETLLI----------CGNPDCTRCYCFECVDSLVGP 128
tr_hit_id A8Q0L6
Definition tr|A8Q0L6|A8Q0L6_BRUMA Protein unc-22, putative OS=Brugia malayi
Align length 120
Score (bit) 33.9
E-value 9.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949864|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C03, 5'
         (672 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8Q0L6|A8Q0L6_BRUMA Protein unc-22, putative OS=Brugia malayi...    34   9.6  

>tr|A8Q0L6|A8Q0L6_BRUMA Protein unc-22, putative OS=Brugia malayi
           GN=Bm1_39425 PE=4 SV=1
          Length = 6781

 Score = 33.9 bits (76), Expect = 9.6
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
 Frame = -1

Query: 615 SCNGSRKAEKPMAAKPE*DNRMQRHESMRVCST*NPHPQCCESITLVLVGSKCCRKTL-- 442
           SC  S KA+   AAK     ++ +  S++V                  +G++ CR     
Sbjct: 349 SCTSSNKADHTSAAKASEVRKIPKDSSIKVDE----------------IGAQECRNETPK 392

Query: 441 -TSITFQWRRKKNRSTK----AIEAKLQPYAYTIKEKSMKQSLAQWQRHEEKDSNKLRKA 277
            T+IT     K N+ TK    A E  L+  +  I E  +++S A   R+E+K   K R+A
Sbjct: 393 STTITKTEETKINQITKHSLGAKEKNLELESNLISESELEKSTASIARNEKKHPTKSREA 452