DK949868 |
Clone id |
TST38A01NGRL0007_C07 |
Library |
TST38 |
Length |
684 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_C07. 5' end sequence. |
Accession |
DK949868 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL57Contig1 |
Sequence |
ACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCTCCTCCTCCTCTTTTGCCGAT GTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTTCTGGCTCTCGCCTTTGCGCA CCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGTCGTCCGTGTCTGCTGCACTG TATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTGAGCCCATTCGGGAATCCATT GTTGCCCGTGAGATGACCCGCCGCTACATGACAGACATGATCACCCATGCAGACACTGAT GTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCATGTGCGTATGAGCTCAGCAAGAAC CCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTAAGCCCAGGTGGTGGAGCTTGGCTC GGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAGCCCACCTCTTCCTTGATGAG ATTGGTGTGCCCTACGATGAGAAGGATACCTATGTTGTTATCAAGCATGCTGCGCTCTTC ACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATGTGAAGCTCTTTAATGCGGTT GCTGCAGAGGATCTGATAATTAAGGAGAATCGTGTAGCGGGTGTGGTCACAAATTGGGCT CTTGTGTCTATGAACCATAATACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
158 |
Score (bit) |
279.0 |
E-value |
1.0e-74 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949868|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_C07, 5' (668 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 279 1e-74 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 275 2e-73 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 269 1e-71 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 265 2e-70 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 263 8e-70 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 214 4e-55 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 208 2e-53 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 202 1e-51 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 198 2e-50 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 195 2e-49 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 194 4e-49 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 109 1e-23 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 106 1e-22 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 103 6e-22 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 99 2e-20 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 96 1e-19 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 91 7e-18 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 85 3e-16 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 84 7e-16 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 82 2e-15 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 82 2e-15 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 82 3e-15 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 82 3e-15 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 80 1e-14 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 77 6e-14 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 77 6e-14 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 74 5e-13 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 74 9e-13 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 74 9e-13 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 73 1e-12
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 279 bits (713), Expect = 1e-74 Identities = 134/158 (84%), Positives = 149/158 (94%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 374 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 375 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 554 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 555 RPNVKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNT 668 RPNVKLFNAVAAEDLI+K RV GVVTNWALVSMNH+T Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT 220
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 275 bits (702), Expect = 2e-73 Identities = 135/158 (85%), Positives = 148/158 (93%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 374 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 375 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 554 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 555 RPNVKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNT 668 RPNVKLFNAVAAEDLI+K NRV GVVTNWALV+ NH+T Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHT 213
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 269 bits (687), Expect = 1e-71 Identities = 130/158 (82%), Positives = 144/158 (91%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 374 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 375 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 554 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 555 RPNVKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNT 668 RPNVKLFNAVA EDLI++ RV GVVTNWALVSMNH+T Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDT 216
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 265 bits (677), Expect = 2e-70 Identities = 130/158 (82%), Positives = 143/158 (90%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 374 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 375 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 554 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 555 RPNVKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNT 668 RPNVKLFNAVA EDLI++ RV GVVTNWALVSMNH+T Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDT 219
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 263 bits (671), Expect = 8e-70 Identities = 130/158 (82%), Positives = 144/158 (91%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 374 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 375 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 554 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 555 RPNVKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNT 668 RPNVKLFNAVAAEDLI+K RV GVVTNWALVSMNH+T Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT 216
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 214 bits (544), Expect = 4e-55 Identities = 105/162 (64%), Positives = 132/162 (81%), Gaps = 6/162 (3%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 371 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 372 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 551 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 552 ARPNVKLFNAVAAEDLIIKE-----NRVAGVVTNWALVSMNH 662 A PNVKLFNA A EDLI+KE R+AGVVTNW LVS+NH Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNH 210
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 208 bits (529), Expect = 2e-53 Identities = 105/162 (64%), Positives = 127/162 (78%), Gaps = 5/162 (3%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 371 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 372 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 551 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 552 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTNWALVSMNHN 665 PN+KLFNA EDLI + + R+AGVVTNW LVSM+H+ Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHD 205
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 202 bits (514), Expect = 1e-51 Identities = 102/162 (62%), Positives = 125/162 (77%), Gaps = 5/162 (3%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 371 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 372 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 551 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 552 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTNWALVSMNHN 665 PN KLFNA EDLI + + R++GVVTNW LVSM+H+ Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHD 209
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 198 bits (504), Expect = 2e-50 Identities = 103/165 (62%), Positives = 131/165 (79%), Gaps = 8/165 (4%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 371 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 372 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 545 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 546 LLARPNVKLFNAVAAEDLIIK--EN---RVAGVVTNWALVSMNHN 665 +L+ PNVKLFNA A EDLI + EN ++AGVV NW LV+++H+ Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHD 212
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 195 bits (496), Expect = 2e-49 Identities = 98/165 (59%), Positives = 123/165 (74%), Gaps = 7/165 (4%) Frame = +3
Query: 195 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 371 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 372 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 551 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 552 ARPNVKLFNAVAAEDLIIK------ENRVAGVVTNWALVSMNHNT 668 PNVKLFNA EDL+ + E VAGVVTNW LV+ H T Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGT 202
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
158 |
Score (bit) |
289.0 |
E-value |
1.0e-76 |
Report |
|