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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949872
Clone id TST38A01NGRL0007_C11
Library
Length 685
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_C11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CACACACAAGCTCAACCTGCTCTAGCATACCAGGAATCATGGTAGAGCTGCTTTTCGAGG
ATATTTTCACCATTGTTGCGATGGACCCAGATGGCAAGAAGTTCGACAAAGTCTCCCGAA
TTGAGGCTCGGAGTGAACAGTTTGACATGCACATGCTTCTAGACGTGAATACAGAAATCT
ATCCTCTGCAAGTTGATGACAAGTTCACCATGGCGTTGTCCAGTACTCTGAGCCTTGATG
GCACTCCTGATGATGCTACATTCGACCAAAGTGGGAGAAAGTCTCTTGCTGACAAGTATG
AATATGTCATGTATGGAAAGCTCTACAAGTTCTCAGATCAAGAGAGTGGCGGCAGTGTGA
AGATAGAAGTTTACGTATCCTTTGGTGGCCTTCTGATGTTGCTGAAAGGAGACCCCAGTA
ATCTTGGAAACCTGATGATGGATCAAAGGCTGTATCTTCTCATGAGAAAGGTTGGCTAAG
CTATGGTACGTACTTAAGGATATTCACGAACGACGACAAACGATCACTATAAATCATCAT
CTACAGGGAAACATTGTTAGGCAGAGTTGTACTTTTAGAGTAGTAGTACAAATGAACGTA
CTATCGAAGTACCCTTCTCTTTAACTGTGGGCCACCTCTACCCAAACAAAGCGAATGGTA
CATTATAGTGGAACAAATCATTCCC
■■Homology search results ■■ -
sp_hit_id Q923G2
Definition sp|Q923G2|RPAB3_MOUSE DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Mus musculus
Align length 148
Score (bit) 148.0
E-value 3.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949872|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C11, 5'
         (685 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q923G2|RPAB3_MOUSE DNA-directed RNA polymerases I, II, and II...   148   3e-35
sp|P52434|RPAB3_HUMAN DNA-directed RNA polymerases I, II, and II...   148   3e-35
sp|Q54YW8|RPAB3_DICDI DNA-directed RNA polymerases I, II, and II...   144   6e-34
sp|A8XT81|RPAB3_CAEBR Probable DNA-directed RNA polymerases I, I...   141   3e-33
sp|Q19826|RPAB3_CAEEL Probable DNA-directed RNA polymerases I, I...   138   2e-32
sp|P20436|RPAB3_YEAST DNA-directed RNA polymerases I, II, and II...   104   5e-22
sp|Q92399|RPAB3_SCHPO DNA-directed RNA polymerases I, II, and II...    94   7e-19
sp|Q503P5|MFSD7_DANRE Major facilitator superfamily domain-conta...    32   2.4  
sp|Q5RAU9|ZN131_PONAB Zinc finger protein 131 OS=Pongo abelii GN...    32   4.1  
sp|P52739|ZN131_HUMAN Zinc finger protein 131 OS=Homo sapiens GN...    32   4.1  
sp|P41954|YLK6_CAEEL Uncharacterized protein D1044.6 OS=Caenorha...    31   5.4  
sp|Q83AX8|RL13_COXBU 50S ribosomal protein L13 OS=Coxiella burne...    31   7.0  
sp|A9NAB1|RL13_COXBR 50S ribosomal protein L13 OS=Coxiella burne...    31   7.0  
sp|A9KBY0|RL13_COXBN 50S ribosomal protein L13 OS=Coxiella burne...    31   7.0  
sp|Q5P7T7|RL13_AZOSE 50S ribosomal protein L13 OS=Azoarcus sp. (...    31   7.0  
sp|Q124N6|RL13_POLSJ 50S ribosomal protein L13 OS=Polaromonas sp...    30   9.1  
sp|A1K971|RL13_AZOSB 50S ribosomal protein L13 OS=Azoarcus sp. (...    30   9.1  

>sp|Q923G2|RPAB3_MOUSE DNA-directed RNA polymerases I, II, and III
           subunit RPABC3 OS=Mus musculus GN=Polr2h PE=2 SV=3
          Length = 150

 Score =  148 bits (373), Expect = 3e-35
 Identities = 72/148 (48%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M  +LFEDIF +  +DP+GKKFD+VSR+   SE F M ++LDVN +IYP+ + DKF + +
Sbjct: 1   MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI 60

Query: 219 SSTLSLDGTPDDATFDQS-GRKSLADKYEYVMYGKLYKFSDQESG--GSVKIEVYVSFGG 389
           +STL  DGT DD  ++ +  R S AD++EYVMYGK+Y+    E+    + ++  YVS+GG
Sbjct: 61  ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG 120

Query: 390 LLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           LLM L+GD +NL    +D R+YLLM+K+
Sbjct: 121 LLMRLQGDANNLHGFEVDSRVYLLMKKL 148


>sp|P52434|RPAB3_HUMAN DNA-directed RNA polymerases I, II, and III
           subunit RPABC3 OS=Homo sapiens GN=POLR2H PE=1 SV=4
          Length = 150

 Score =  148 bits (373), Expect = 3e-35
 Identities = 72/148 (48%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M  +LFEDIF +  +DP+GKKFD+VSR+   SE F M ++LDVN +IYP+ + DKF + +
Sbjct: 1   MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI 60

Query: 219 SSTLSLDGTPDDATFDQS-GRKSLADKYEYVMYGKLYKFSDQESG--GSVKIEVYVSFGG 389
           +STL  DGT DD  ++ +  R S AD++EYVMYGK+Y+    E+    + ++  YVS+GG
Sbjct: 61  ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG 120

Query: 390 LLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           LLM L+GD +NL    +D R+YLLM+K+
Sbjct: 121 LLMRLQGDANNLHGFEVDSRVYLLMKKL 148


>sp|Q54YW8|RPAB3_DICDI DNA-directed RNA polymerases I, II, and III
           subunit rpabc3 OS=Dictyostelium discoideum GN=polr2h
           PE=3 SV=1
          Length = 142

 Score =  144 bits (362), Expect = 6e-34
 Identities = 70/144 (48%), Positives = 103/144 (71%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M  +LFED F +  +DPDGKKFD+VSR    SE ++M + +D+ T IYPL   ++F M L
Sbjct: 1   MTSILFEDTFEVKEIDPDGKKFDRVSRFVCYSENYEMDLQIDIATHIYPLG-HERFKMVL 59

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLM 398
           +S+L+LDG+ D++    + + SLADKY+YVMYGK++K+  Q+   S K+ V+ SFGGLL+
Sbjct: 60  ASSLNLDGSSDNSGSYDTNKPSLADKYDYVMYGKIFKY--QKENSSSKVSVFASFGGLLV 117

Query: 399 LLKGDPSNLGNLMMDQRLYLLMRK 470
           LL+GDP  L  + +D R+YLL++K
Sbjct: 118 LLQGDPRYLPGIELDARIYLLIKK 141


>sp|A8XT81|RPAB3_CAEBR Probable DNA-directed RNA polymerases I, II,
           and III subunit RPABC3 OS=Caenorhabditis briggsae
           GN=rpb-8 PE=3 SV=1
          Length = 148

 Score =  141 bits (356), Expect = 3e-33
 Identities = 66/145 (45%), Positives = 98/145 (67%), Gaps = 1/145 (0%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M  ++F+D+F++ ++DPDGKKFD+VSR    +E F M +++D+N++IYPL+ +DKF + L
Sbjct: 1   MAGIIFDDMFSVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKFRLVL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESG-GSVKIEVYVSFGGLL 395
           ++TL  DG  D+  +D         +YEYVMYGK+Y+  D +SG    ++  Y SFGGLL
Sbjct: 61  ATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDSGTDGGQLAAYASFGGLL 120

Query: 396 MLLKGDPSNLGNLMMDQRLYLLMRK 470
           M LKG+  NL    +D  LYLLM+K
Sbjct: 121 MRLKGEAINLHGFEVDMNLYLLMKK 145


>sp|Q19826|RPAB3_CAEEL Probable DNA-directed RNA polymerases I, II,
           and III subunit RPABC3 OS=Caenorhabditis elegans
           GN=rpb-8 PE=1 SV=1
          Length = 148

 Score =  138 bits (348), Expect = 2e-32
 Identities = 65/145 (44%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M  ++F+D+F + ++DPDGKKFD+VSR    +E F M +++D+N++IYPL+ +DK  + L
Sbjct: 1   MAGIIFDDMFKVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKVRLVL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESG-GSVKIEVYVSFGGLL 395
           ++TL  DG  D+  +D         +YEYVMYGK+Y+  D ++G    K+  Y SFGGLL
Sbjct: 61  ATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDTGTDGGKLAAYASFGGLL 120

Query: 396 MLLKGDPSNLGNLMMDQRLYLLMRK 470
           M LKG+  NL    +D  LYLLM+K
Sbjct: 121 MRLKGEAINLHGFEVDMNLYLLMKK 145


>sp|P20436|RPAB3_YEAST DNA-directed RNA polymerases I, II, and III
           subunit RPABC3 OS=Saccharomyces cerevisiae GN=RPB8 PE=1
           SV=1
          Length = 146

 Score =  104 bits (259), Expect = 5e-22
 Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHML-LDVNTEIYPLQVDDKFTMA 215
           M   LF+DIF +  +DP   +++KV RIEA S   D   L LD+N E++P+   D  T+ 
Sbjct: 1   MSNTLFDDIFQVSEVDPG--RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVT 58

Query: 216 LSSTLSLDGTPDDATF-------DQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVY 374
           ++S+L+L+ TP + +         Q+G +SLAD Y+YVMYG  YKF   E      I VY
Sbjct: 59  IASSLNLEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKF---EEVSKDLIAVY 115

Query: 375 VSFGGLLMLLKGDPSNLGNLMMDQRLYLLMRK 470
            SFGGLLM L+G+  NL NL   +  YLL+R+
Sbjct: 116 YSFGGLLMRLEGNYRNLNNL-KQENAYLLIRR 146


>sp|Q92399|RPAB3_SCHPO DNA-directed RNA polymerases I, II, and III
           subunit RPABC3 OS=Schizosaccharomyces pombe GN=rpb8 PE=2
           SV=2
          Length = 125

 Score = 94.0 bits (232), Expect = 7e-19
 Identities = 55/141 (39%), Positives = 88/141 (62%)
 Frame = +3

Query: 48  LLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMALSST 227
           +L ++IFT+ ++D   +K+ +VSRI A S Q DM++ LD+N++IYPL+ D  F++ ++S 
Sbjct: 5   VLLDEIFTVTSVDK--QKYQRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQITSN 62

Query: 228 LSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLMLLK 407
           L+   +PD           L +  +Y+MYGK+Y+    E     K+ VYVSFGGLLM ++
Sbjct: 63  LN---SPD-----------LKEAADYIMYGKVYRV---EEAKDEKVSVYVSFGGLLMAIE 105

Query: 408 GDPSNLGNLMMDQRLYLLMRK 470
           G    L  L +D  +YLL+R+
Sbjct: 106 GSHRKLYRLSLD-HVYLLLRR 125


>sp|Q503P5|MFSD7_DANRE Major facilitator superfamily
           domain-containing protein 7 OS=Danio rerio GN=mfsd7 PE=2
           SV=1
          Length = 474

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
 Frame = -3

Query: 662 CTIRFVWVEVAHS*REGYFDSTFI--CTTTLKVQLCLTMFPCR**FIVIVCRRS*ISLST 489
           C+   +WV      R     S+++  C   L+V   L++ P    F V++C ++  +L+ 
Sbjct: 90  CSFSSMWVLDTLGLRCSLIGSSWLNACGCVLRVCGVLSVTPQWAVFAVVMCGQTLCALA- 148

Query: 488 YHSLANLSHEKIQPLIHHQVSKITGVSFQQHQKATKGYVNFYLHTAATLLI*ELVELSIH 309
                       QPL+    +K+  + F  HQ+AT   +    +T   LL   L  L + 
Sbjct: 149 ------------QPLVIFAPTKLAALWFPDHQRATANMLASMANTVGLLLANLLSPLIVS 196

Query: 308 ---DIFILVSKRLSPTLVEC 258
              D+F+L+     P  V C
Sbjct: 197 YSGDLFLLLLIYSIPAAVAC 216


>sp|Q5RAU9|ZN131_PONAB Zinc finger protein 131 OS=Pongo abelii
           GN=ZNF131 PE=2 SV=1
          Length = 589

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -2

Query: 303 IHTCQ--QETFSHFGRM*HHQECHQGSEYWTTPW*TCHQ-LAEDRFLYSRLEAC 151
           IH CQ  ++ F HFG    H   H G + +  P   CH+  A +  L   L AC
Sbjct: 293 IHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECP--NCHERFARNSTLKCHLTAC 344


>sp|P52739|ZN131_HUMAN Zinc finger protein 131 OS=Homo sapiens
           GN=ZNF131 PE=2 SV=2
          Length = 623

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -2

Query: 303 IHTCQ--QETFSHFGRM*HHQECHQGSEYWTTPW*TCHQ-LAEDRFLYSRLEAC 151
           IH CQ  ++ F HFG    H   H G + +  P   CH+  A +  L   L AC
Sbjct: 327 IHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECP--NCHERFARNSTLKCHLTAC 378
tr_hit_id B3TLS5
Definition tr|B3TLS5|B3TLS5_ELAGV RNA polymerase OS=Elaeis guineensis var. tenera
Align length 145
Score (bit) 223.0
E-value 1.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949872|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C11, 5'
         (685 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3TLS5|B3TLS5_ELAGV RNA polymerase OS=Elaeis guineensis var. ...   223   1e-56
tr|A9P0G9|A9P0G9_PICSI Putative uncharacterized protein OS=Picea...   222   2e-56
tr|A9RV22|A9RV22_PHYPA Predicted protein OS=Physcomitrella paten...   222   2e-56
tr|Q5Z6G3|Q5Z6G3_ORYSJ Putative RNA polymerase I, II and III 16....   204   4e-51
tr|A3BF08|A3BF08_ORYSJ Putative uncharacterized protein OS=Oryza...   204   4e-51
tr|A2YGL5|A2YGL5_ORYSI Putative uncharacterized protein OS=Oryza...   204   4e-51
tr|B8AN91|B8AN91_ORYSI Putative uncharacterized protein OS=Oryza...   201   4e-50
tr|Q84SP5|Q84SP5_ORYSJ Os03g0845700 protein OS=Oryza sativa subs...   199   1e-49
tr|A7QAN3|A7QAN3_VITVI Chromosome chr5 scaffold_72, whole genome...   197   5e-49
tr|Q9M1A8|Q9M1A8_ARATH Putative uncharacterized protein T16L24.1...   185   2e-45
tr|B4FPA6|B4FPA6_MAIZE DNA-directed RNA polymerases I, II, and I...   185   2e-45
tr|O81097|O81097_ARATH RNA polymerase I, II and III 16.5 kDa sub...   185   3e-45
tr|B6SRG8|B6SRG8_MAIZE DNA-directed RNA polymerases I, II, and I...   184   5e-45
tr|A5AWJ9|A5AWJ9_VITVI Putative uncharacterized protein OS=Vitis...   182   2e-44
tr|A7QAN4|A7QAN4_VITVI Chromosome chr5 scaffold_72, whole genome...   175   3e-42
tr|A4S3L1|A4S3L1_OSTLU Predicted protein OS=Ostreococcus lucimar...   167   4e-40
tr|Q010E8|Q010E8_OSTTA Glyoxylase (ISS) OS=Ostreococcus tauri GN...   166   1e-39
tr|Q568H8|Q568H8_DANRE Zgc:110289 OS=Danio rerio GN=zgc:110289 P...   154   5e-36
tr|Q4S7A1|Q4S7A1_TETNG Chromosome 1 SCAF14716, whole genome shot...   153   9e-36
tr|Q9AXJ3|Q9AXJ3_MANES RNA polymerase I, II and III subunit RPB8...   152   1e-35
tr|A9PGQ8|A9PGQ8_POPTR Putative uncharacterized protein OS=Popul...   148   3e-34
tr|A8I4L4|A8I4L4_CHLRE DNA-directed RNA polymerase II, 16.5 kDa ...   148   3e-34
tr|A7S8M4|A7S8M4_NEMVE Predicted protein OS=Nematostella vectens...   146   1e-33
tr|Q6GQD4|Q6GQD4_XENLA MGC80152 protein OS=Xenopus laevis GN=pol...   145   2e-33
tr|B4LD87|B4LD87_DROVI GJ14092 OS=Drosophila virilis GN=GJ14092 ...   145   3e-33
tr|B4KUW6|B4KUW6_DROMO GI13746 OS=Drosophila mojavensis GN=GI137...   145   3e-33
tr|B4IYV0|B4IYV0_DROGR GH15097 OS=Drosophila grimshawi GN=GH1509...   145   3e-33
tr|A8PIW4|A8PIW4_BRUMA DNA-directed RNA polymerases I, II, and I...   144   4e-33
tr|B4MNF8|B4MNF8_DROWI GK17059 OS=Drosophila willistoni GN=GK170...   144   5e-33
tr|B3RTQ3|B3RTQ3_TRIAD Putative uncharacterized protein OS=Trich...   144   5e-33

>tr|B3TLS5|B3TLS5_ELAGV RNA polymerase OS=Elaeis guineensis var.
           tenera PE=2 SV=1
          Length = 145

 Score =  223 bits (567), Expect = 1e-56
 Identities = 109/145 (75%), Positives = 124/145 (85%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           MVELLFEDIFT+  +DPDGKKFDKVSRIEARSEQFDM+M LDVNTEIYPL V DKFTM L
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLM 398
           + TLSLDGTPD   + Q  RKSLADK+EYVM+GKLYK S++ SG +VK+E+Y SFGGLLM
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 399 LLKGDPSNLGNLMMDQRLYLLMRKV 473
           +LKGDPSN  N  +DQRL+LLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>tr|A9P0G9|A9P0G9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 145

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/145 (73%), Positives = 125/145 (86%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           MVELLFEDIFT+  +DPDGKKFDKVSRIEARSEQFDM+MLLDVN ++YP+ V +KF +AL
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLM 398
           + TL+LDGTPD+  F Q GRKSLADKYEYVMYGKLY  S++ SG +VK+E+  SFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 399 LLKGDPSNLGNLMMDQRLYLLMRKV 473
           LLKGDPSN GN  +DQRL+LLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>tr|A9RV22|A9RV22_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_178386 PE=4 SV=1
          Length = 147

 Score =  222 bits (565), Expect = 2e-56
 Identities = 109/143 (76%), Positives = 124/143 (86%)
 Frame = +3

Query: 48  LLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMALSST 227
           LLFEDIFTI  +DPDGKKFDKVSRI A SEQFDM +LLDVN +IYPL   +KFT+AL+ST
Sbjct: 5   LLFEDIFTISQLDPDGKKFDKVSRIVAHSEQFDMDVLLDVNIDIYPLHKGEKFTLALAST 64

Query: 228 LSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLMLLK 407
           LSLDGT DD TFDQS RKSLADKYEYVMYGK+YK++D ES G  K+E YVSFGGLLM LK
Sbjct: 65  LSLDGTMDDGTFDQSNRKSLADKYEYVMYGKVYKYADTESKGPPKVETYVSFGGLLMCLK 124

Query: 408 GDPSNLGNLMMDQRLYLLMRKVG 476
           GDP+NL +L++DQR+YLLMRKVG
Sbjct: 125 GDPNNLNSLVLDQRVYLLMRKVG 147


>tr|Q5Z6G3|Q5Z6G3_ORYSJ Putative RNA polymerase I, II and III 16.5
           kDa subunit OS=Oryza sativa subsp. japonica
           GN=P0028E05.28-1 PE=4 SV=1
          Length = 396

 Score =  204 bits (519), Expect = 4e-51
 Identities = 98/149 (65%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +3

Query: 30  PGIMVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFT 209
           P  MVE LFEDIFT+  +DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP++  D+FT
Sbjct: 248 PRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFT 307

Query: 210 MALSSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFS-DQESGGSVKIEVYVSFG 386
           M L+ TL+LDGTPD   + Q+GRK+LADK++YVM+GKLYK S D  SG + K+E+Y SFG
Sbjct: 308 MVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFG 367

Query: 387 GLLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           GLLM+LKGDPS+  +  +DQRL+LL+RKV
Sbjct: 368 GLLMMLKGDPSSAASFELDQRLFLLIRKV 396


>tr|A3BF08|A3BF08_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_021630 PE=4 SV=1
          Length = 191

 Score =  204 bits (519), Expect = 4e-51
 Identities = 98/149 (65%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +3

Query: 30  PGIMVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFT 209
           P  MVE LFEDIFT+  +DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP++  D+FT
Sbjct: 43  PRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFT 102

Query: 210 MALSSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFS-DQESGGSVKIEVYVSFG 386
           M L+ TL+LDGTPD   + Q+GRK+LADK++YVM+GKLYK S D  SG + K+E+Y SFG
Sbjct: 103 MVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFG 162

Query: 387 GLLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           GLLM+LKGDPS+  +  +DQRL+LL+RKV
Sbjct: 163 GLLMMLKGDPSSAASFELDQRLFLLIRKV 191


>tr|A2YGL5|A2YGL5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_24321 PE=4 SV=1
          Length = 191

 Score =  204 bits (519), Expect = 4e-51
 Identities = 98/149 (65%), Positives = 123/149 (82%), Gaps = 1/149 (0%)
 Frame = +3

Query: 30  PGIMVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFT 209
           P  MVE LFEDIFT+  +DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP++  D+FT
Sbjct: 43  PRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFT 102

Query: 210 MALSSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFS-DQESGGSVKIEVYVSFG 386
           M L+ TL+LDGTPD   + Q+GRK+LADK++YVM+GKLYK S D  SG + K+E+Y SFG
Sbjct: 103 MVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFG 162

Query: 387 GLLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           GLLM+LKGDPS+  +  +DQRL+LL+RKV
Sbjct: 163 GLLMMLKGDPSSAASFELDQRLFLLIRKV 191


>tr|B8AN91|B8AN91_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14307 PE=4 SV=1
          Length = 215

 Score =  201 bits (511), Expect = 4e-50
 Identities = 100/158 (63%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
 Frame = +3

Query: 9   SSTCSSIPGIMVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPL 188
           SS+     G M E LFEDIFT+  +DPDGKKFD+VSRIEARS+QFDM+M LDV T++YP+
Sbjct: 58  SSSKKGRQGGMAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPM 117

Query: 189 QVDDKFTMALSSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFS---DQESGGSV 359
              D+FTM L  TL+LDGTPD A F Q+GRK+LADKYEYVM+GKLYK S   D     + 
Sbjct: 118 HPGDRFTMVLVPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAK 177

Query: 360 KIEVYVSFGGLLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           K+E+Y SFGGLL++LKGDPS+  N  +DQRL+LLMRKV
Sbjct: 178 KVEMYASFGGLLVMLKGDPSSAANFELDQRLFLLMRKV 215


>tr|Q84SP5|Q84SP5_ORYSJ Os03g0845700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0043P23.23 PE=2 SV=1
          Length = 148

 Score =  199 bits (507), Expect = 1e-49
 Identities = 97/148 (65%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M E LFEDIFT+  +DPDGKKFD+VSRIEARS+QFDM+M LDV T++YP+   D+FTM L
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFS---DQESGGSVKIEVYVSFGG 389
             TL+LDGTPD A F Q+GRK+LADKYEYVM+GKLYK S   D     + K+E+Y SFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 390 LLMLLKGDPSNLGNLMMDQRLYLLMRKV 473
           LL++LKGDPS+  N  +DQRL+LLMRKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148


>tr|A7QAN3|A7QAN3_VITVI Chromosome chr5 scaffold_72, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034618001
           PE=4 SV=1
          Length = 145

 Score =  197 bits (501), Expect = 5e-49
 Identities = 95/145 (65%), Positives = 118/145 (81%)
 Frame = +3

Query: 39  MVELLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMAL 218
           M   LF DIF ++ +DPDGKKFDKVSRIEA+SEQ DM+M LDVNTEIYP+   +KF M+L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 219 SSTLSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLM 398
           +STL LDGTPD   + Q+GRKSLADK+EYVM+GKLYK S++ SG +VK  +YVSFGGLLM
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 399 LLKGDPSNLGNLMMDQRLYLLMRKV 473
           +L GDP+N   L +DQR++LL+RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>tr|Q9M1A8|Q9M1A8_ARATH Putative uncharacterized protein T16L24.150
           (Putative uncharacterized protein At3g59600) (RNA
           polymerase II subunit, putative) (Putative
           uncharacterized protein At3g59600/T16L24_150)
           OS=Arabidopsis thaliana GN=T16L24.150 PE=2 SV=1
          Length = 146

 Score =  185 bits (470), Expect = 2e-45
 Identities = 87/142 (61%), Positives = 116/142 (81%)
 Frame = +3

Query: 48  LLFEDIFTIVAMDPDGKKFDKVSRIEARSEQFDMHMLLDVNTEIYPLQVDDKFTMALSST 227
           ++FEDIF +  +DPDGKKFDKV+R+EARS   +M M LDVNTE+YPL V DKFT+A++ T
Sbjct: 6   IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPT 65

Query: 228 LSLDGTPDDATFDQSGRKSLADKYEYVMYGKLYKFSDQESGGSVKIEVYVSFGGLLMLLK 407
           L+LDGTPD   F    +K+LADKYEY+M+GKLYK S+++ G + K E+YVSFGGLLMLL+
Sbjct: 66  LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERD-GKTPKAELYVSFGGLLMLLQ 124

Query: 408 GDPSNLGNLMMDQRLYLLMRKV 473
           GDP+++ +  +DQRL+LLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146