DK949883
Clone id TST38A01NGRL0007_C22
Library
Length 683
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_C22. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCTATCTTATCCTCGTAAGGTGGCTATGGCGAGAGAAGCTTTGCGTCGACATGAGATCTT
CGAAATGCAGGGTTTCATGCCACTTACAATGTCTTCCTCAGCTCTAAGCTCATCATCATC
GTCATGTTTTTCTCCATCGTCATTCAGGAGAGACTATACAGAGAAGTGGGAACCCAACGA
AGAACGTAACAAAGCAGTTGACAATGTGCGTCACGTGTTGTGTAGGGCAGGTACATCATC
TTCAGTCAGCTCTGCAGCTCCTTTTGGTTTCAAGCTCAGCACGAGCTCCGAAATTCATAA
GCTTCAAGAAAAACAGCAGCCCAGTTGGAGCTGCGAAAACATTGGACAGGCGGCTCCTGG
GCGATTTGGTTCGTGCAGAGTAGAAGCATCACCTTCATCACCATCATCATCAGCTGAATC
TTTTTCTTCACTAGTATCCTTGTCATCAGATGCACCTCAATCTGATTCTTCAGAATTGCC
ATCTGTGTCCAAACGCAGCAGGCCTGTGTTTGTCTTGAGTGACAAGCCACATAGAGCCTT
GCAGCAGCAGAGCAGGCCTCCAGAGAGAGGCAAACCAAAGAGACGCTTCGAAGATAAGGA
TGAAGATGATCACGGTTTGTCTCTAACAACCACCGTTCGCGATCACCGCAGTGGGTACGT
TGCTCTGATTGGCAAACCAAATG
■■Homology search results ■■ -
sp_hit_id Q8NM23
Definition sp|Q8NM23|PURT_CORGL Phosphoribosylglycinamide formyltransferase 2 OS=Corynebacterium glutamicum
Align length 47
Score (bit) 31.6
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949883|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C22, 5'
(683 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NM23|PURT_CORGL Phosphoribosylglycinamide formyltransferase... 32 4.1
sp|A4QHG1|PURT_CORGB Phosphoribosylglycinamide formyltransferase... 32 4.1
sp|Q555U5|Y4821_DICDI Probable inactive serine/threonine-protein... 31 7.0
sp|Q8FMB3|PURT_COREF Phosphoribosylglycinamide formyltransferase... 30 9.1

>sp|Q8NM23|PURT_CORGL Phosphoribosylglycinamide formyltransferase 2
OS=Corynebacterium glutamicum GN=purT PE=3 SV=2
Length = 408

Score = 31.6 bits (70), Expect = 4.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2

Query: 152 DYTEKWEPNEERNKAVDNVRHVLCRAGTSSSVSSAAPFGFKLSTSSE 292
DY E W+P E +A++N R V R ++++ FG +L S +
Sbjct: 239 DYVESWQPMEMTPRALENARSVAAR--ITNALGGRGVFGVELFVSGD 283


>sp|A4QHG1|PURT_CORGB Phosphoribosylglycinamide formyltransferase 2
OS=Corynebacterium glutamicum (strain R) GN=purT PE=3
SV=1
Length = 408

Score = 31.6 bits (70), Expect = 4.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2

Query: 152 DYTEKWEPNEERNKAVDNVRHVLCRAGTSSSVSSAAPFGFKLSTSSE 292
DY E W+P E +A++N R V R ++++ FG +L S +
Sbjct: 239 DYVESWQPMEMTPRALENARSVAAR--ITNALGGRGVFGVELFVSGD 283


>sp|Q555U5|Y4821_DICDI Probable inactive serine/threonine-protein
kinase DDB_G0274821 OS=Dictyostelium discoideum
GN=DDB_G0274821 PE=3 SV=1
Length = 854

Score = 30.8 bits (68), Expect = 7.0
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2

Query: 143 FRRDYTEKWEPNEERNKAVDNVRHVLCRAGTSSSVSSAAPFGFKLSTSSEIHKLQEKQQP 322
F+ T+ + NE NK+ + +L ++ +SSS SS++ S+SS Q++QQP
Sbjct: 266 FKNQQTQ--QVNEIINKSSNTTLQLLNKSSSSSSSSSSSSSSSSSSSSSSSLSFQQQQQP 323

Query: 323 S 325
+
Sbjct: 324 N 324


>sp|Q8FMB3|PURT_COREF Phosphoribosylglycinamide formyltransferase 2
OS=Corynebacterium efficiens GN=purT PE=3 SV=2
Length = 402

Score = 30.4 bits (67), Expect = 9.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2

Query: 152 DYTEKWEPNEERNKAVDNVRHVLCRAGTSSSVSSAAPFGFKLSTSSE 292
DY E W+P E A++N R V R ++++ FG +L S +
Sbjct: 239 DYVESWQPMEMTAPALENARSVAAR--ITNALGGRGVFGVELFVSGD 283


tr_hit_id B2B026
Definition tr|B2B026|B2B026_PODAN Predicted CDS Pa_3_6090 OS=Podospora anserina
Align length 48
Score (bit) 35.0
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949883|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_C22, 5'
(683 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2B026|B2B026_PODAN Predicted CDS Pa_3_6090 OS=Podospora anse... 35 4.5
tr|A3B1J8|A3B1J8_ORYSJ Putative uncharacterized protein OS=Oryza... 34 9.9
tr|B4L2H5|B4L2H5_DROMO GI15182 OS=Drosophila mojavensis GN=GI151... 34 9.9

>tr|B2B026|B2B026_PODAN Predicted CDS Pa_3_6090 OS=Podospora
anserina PE=4 SV=1
Length = 906

Score = 35.0 bits (79), Expect = 4.5
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2

Query: 143 FRRDYTEKWEPNEERNKAVDNVRHVLCRAGTSSSVSSAAPFGFKLSTS 286
FRRDY + W+PNE RN A + +L G +S +++ P F+ S
Sbjct: 307 FRRDYAKFWDPNETRNAAFTAL--ILSIMGIASCLAAKLPHKFEKMVS 352


>tr|A3B1J8|A3B1J8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016920 PE=4 SV=1
Length = 1088

Score = 33.9 bits (76), Expect = 9.9
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Frame = +3

Query: 9 ILVRWLWREKLCV-------DMRSSKCRVSCH------LQCLPQL*AXXXXXXXXXXXSG 149
I+V W+W EK + DM +S+C VSC LQ LP+ SG
Sbjct: 989 IVVTWIWSEKKELRDKWSVPDMAASECEVSCFSEDFAVLQALPR--EAEPLHIIGCLSSG 1046

Query: 150 ETIQRSGNPTKNVTKQLTMCVTCCVGQ 230
++G T QL + CC G+
Sbjct: 1047 SVCFKAGFQTVQNIAQLVIFSVCCQGR 1073


>tr|B4L2H5|B4L2H5_DROMO GI15182 OS=Drosophila mojavensis GN=GI15182
PE=4 SV=1
Length = 219

Score = 33.9 bits (76), Expect = 9.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2

Query: 524 KPHRALQQQSRPPERGKPKRRFEDKDEDDHGLSLTTTVRDHRSGYVALI 670
KP R Q+Q +R + E+ D+DD T VRD + G ALI
Sbjct: 63 KPARTAQRQKHQQQRQQRSSSDEESDDDDSDDDSETEVRDAKKGVAALI 111