DK949900 |
Clone id |
TST38A01NGRL0007_D15 |
Library |
TST38 |
Length |
650 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_D15. 5' end sequence. |
Accession |
DK949900 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL112Contig1 |
Sequence |
ACAATTTTGGATGTGAAGAGGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCTCCGGCAG CCCCGCTTGTGGGTCGCCCAGACGGTCATGAGTCTGCCCAGTCTGCAAGGTTTCTGGGTT GCAGAGAGCTCCATTTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCACCACA ACAAAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGATATACAGCTGTATTCCCGA GAATCTATGTGCGAGATCCACACAAAGTTTTAGGGGTTACTCGAGATGCATCCGAGGAAG AGATTCAATCAGCTCGCAACTTTCTTGCTGAACAATATGCACATCATGAACGAAGTAGGG AAGCTGTTGAGGCAGCTCATGACAAAATCATCATGGAAAGCTTCCGAGCAAGGAAAAAAT CAAAAATCAATCTTAAGAGCAACCTTAAAAAGAAAGTTGAAGAATCACCTCCGTGGGTGA AAAGAATTCTGAATATTTTTGAAGTTCCACCTTCTCAAATTATACTACAGAGGGCGGCCT TTTTTGGACTTATGGGAGTGTGGAGTGTGATGAATCCAGCCGAGGGGGGCCCCGCATTTC AGGTGGCTGTTTCTCTAGCAGGATGTGTGTATCTTCTTAATTATAGGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84BU3 |
Definition |
sp|Q84BU3|DNAJ_LACAC Chaperone protein dnaJ OS=Lactobacillus acidophilus |
Align length |
55 |
Score (bit) |
37.4 |
E-value |
0.069 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SI00 |
Definition |
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
152 |
Score (bit) |
175.0 |
E-value |
2.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949900|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_D15, 5' (650 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 175 2e-42 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 174 3e-42 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 174 3e-42 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 174 4e-42 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 161 4e-38 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 154 4e-36 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 153 1e-35 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 152 2e-35 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 148 3e-34 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 146 1e-33 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 121 3e-26 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 121 3e-26 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 121 4e-26 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 115 2e-24 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 114 5e-24 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-23 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 97 8e-19 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 97 1e-18 tr|Q60D81|Q60D81_BRAOL Putative Expressed protein OS=Brassica ol... 80 1e-13 tr|Q6H5B0|Q6H5B0_ORYSJ Os09g0380200 protein OS=Oryza sativa subs... 77 9e-13 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 77 9e-13 tr|Q0J5P0|Q0J5P0_ORYSJ Os08g0416900 protein (Fragment) OS=Oryza ... 74 8e-12 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 74 1e-11 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 68 4e-10 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 66 2e-09 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 65 3e-09 tr|Q2JQY0|Q2JQY0_SYNJA Putative uncharacterized protein OS=Synec... 64 1e-08 tr|B2J7N5|B2J7N5_NOSP7 Putative uncharacterized protein OS=Nosto... 64 1e-08
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 175 bits (443), Expect = 2e-42 Identities = 89/152 (58%), Positives = 107/152 (70%) Frame = +3
Query: 195 ALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEA 374 A G S VFPR+ V+DP K LGV++DASEEE++ ARN+L EQY HE+SREA+E+ Sbjct: 4 AFGSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIES 63
Query: 375 AHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLM 554 A+D IIM+SFR R VEESPPWV+ I+N+ EVP I+ QRAA F L+ Sbjct: 64 AYDTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLL 123
Query: 555 GVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRL 650 GVWSV NPA GGPAFQVA+SLA CVY LN RL Sbjct: 124 GVWSVFNPANGGPAFQVAISLAACVYFLNDRL 155
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 174 bits (442), Expect = 3e-42 Identities = 91/149 (61%), Positives = 105/149 (70%) Frame = +3
Query: 204 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHD 383 G ++ VFPR VRDP K+LGV+ DASEEEI+ A+N+L EQY HE SREA+EAA++ Sbjct: 55 GGAENLKPPVFPRRNVRDPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYE 114
Query: 384 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVW 563 KIIM SFR R VEESPPWV+ ILN+ EVP I QRAA F L+GVW Sbjct: 115 KIIMHSFRVRKASKINLKTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVW 174
Query: 564 SVMNPAEGGPAFQVAVSLAGCVYLLNYRL 650 SV NPAEGGPAFQVAVSLA CVY +N RL Sbjct: 175 SVFNPAEGGPAFQVAVSLAACVYFINLRL 203
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 174 bits (442), Expect = 3e-42 Identities = 89/140 (63%), Positives = 103/140 (73%) Frame = +3
Query: 231 VFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRA 410 VFPR VRDP K+LG++ DASEEEI+ A+N+L EQY HE SREA+EAA++KIIM S+R Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 411 RXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGG 590 R VEESPPWV+ ILN+ EVP II QRAA F L+GVWSV NPAEGG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 591 PAFQVAVSLAGCVYLLNYRL 650 PAFQVAVSLA CVY +N RL Sbjct: 125 PAFQVAVSLAACVYFINLRL 144
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 174 bits (441), Expect = 4e-42 Identities = 87/155 (56%), Positives = 111/155 (71%), Gaps = 2/155 (1%) Frame = +3
Query: 192 CALGGS--SDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREA 365 CA+ S G+ VFPR+ V DP+K LGV++ ASEEEIQ ARNFL EQYA HERS E+ Sbjct: 66 CAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEARNFLIEQYAGHERSVES 125
Query: 366 VEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 545 +EAA +KIIM+SFR R V+ESPPWV+ ++N EVPPS++I++RA F Sbjct: 126 IEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINFLEVPPSEVIIRRACLF 185
Query: 546 GLMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRL 650 ++GVWSVMN +EGGPAFQVAVSL C+Y LN ++ Sbjct: 186 AVIGVWSVMNSSEGGPAFQVAVSLVTCIYFLNEKV 220
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 161 bits (407), Expect = 4e-38 Identities = 83/170 (48%), Positives = 108/170 (63%), Gaps = 4/170 (2%) Frame = +3
Query: 144 PGQKGSRHIHHHNKIV----CALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQS 311 P ++ S+ + + ++ CA+ G FPRI V DP+K LG+ DASEEEI S Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 312 ARNFLAEQYAHHERSREAVEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRIL 491 +RNFL +QYA HERS E++EAA +KI+M SF R VEESPPWVK +L Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 492 NIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGPAFQVAVSLAGCVYLLN 641 N E+P +++I +R F MG WS++N AEGGPAFQVAVSLA C+Y LN Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAFQVAVSLAACIYFLN 173
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 154 bits (389), Expect = 4e-36 Identities = 76/136 (55%), Positives = 94/136 (69%) Frame = +3
Query: 234 FPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRAR 413 F R+ V DP+K LG++RDASEEE+ S+RNFL QYA+HERS E++EAA +KI+M+SF R Sbjct: 54 FSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKSFINR 113
Query: 414 XXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGP 593 VEESPPWV+ +L+ E+PP IIL+R FG M WSVMN AE GP Sbjct: 114 KKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSAEAGP 173
Query: 594 AFQVAVSLAGCVYLLN 641 AFQVA+S CVY LN Sbjct: 174 AFQVAISFGACVYFLN 189
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 154 bits (388), Expect = 6e-36 Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 4/154 (2%) Frame = +3
Query: 201 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 368 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 369 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 548 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 549 LMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRL 650 + WS+ AE GPAFQ+A+SL C+Y LN ++ Sbjct: 177 FIAGWSIATSAENGPAFQLAISLFSCIYFLNDKM 210
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 154 bits (388), Expect = 6e-36 Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 4/154 (2%) Frame = +3
Query: 201 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 368 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 369 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 548 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 549 LMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRL 650 + WS+ AE GPAFQ+A+SL C+Y LN ++ Sbjct: 177 FIAGWSIATSAENGPAFQLAISLFSCIYFLNDKM 210
>tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor) (At5g23040/MYJ24_3) OS=Arabidopsis thaliana GN=AtCDF1 PE=2 SV=1 Length = 258
Score = 153 bits (386), Expect = 1e-35 Identities = 81/160 (50%), Positives = 99/160 (61%) Frame = +3
Query: 162 RHIHHHNKIVCALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYA 341 R++ K V SS G FPR V DP+K LGV+ ASEEEI ++RNFL +QYA Sbjct: 37 RNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYA 96
Query: 342 HHERSREAVEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQI 521 HERS E++E A +K++M SF R VEESPPW+K +L+ E+PP Sbjct: 97 GHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDT 156
Query: 522 ILQRAAFFGLMGVWSVMNPAEGGPAFQVAVSLAGCVYLLN 641 I +R F MG WS+MN AEGGPAFQVAVSLA CVY LN Sbjct: 157 IFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLN 196
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 152 bits (383), Expect = 2e-35 Identities = 74/143 (51%), Positives = 95/143 (66%) Frame = +3
Query: 222 YTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMES 401 + VFPR +RDP+K+LGV RDASEEEI+ ARNFL +QYA HE S EA+E A++KIIM+S Sbjct: 69 HVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKIIMKS 128
Query: 402 FRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPA 581 ++ R VEESP WVK +L FEVP II +R FF + WS+ A Sbjct: 129 YQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIATSA 188
Query: 582 EGGPAFQVAVSLAGCVYLLNYRL 650 E GPAFQ+A+SL C+Y LN ++ Sbjct: 189 ENGPAFQLAISLFSCIYFLNEKM 211
|