DK949905 |
Clone id |
TST38A01NGRL0007_D20 |
Library |
TST38 |
Length |
695 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_D20. 5' end sequence. |
Accession |
DK949905 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3238Contig1 |
Sequence |
GTGAACTCATGCATTTCAGCTGTTGACTGTGCTCCTGCTCATTGTCTGACGAGTGTGGAT ATGGCAGATTTGACTCGAGTACTCACTGGATCTGAAGAGAACTGGTTGAAGGGCACTGCT GGAGGATCTGGAATTTGTGTTTTTGGTGCTCTATTTAATACAACAATCGGCACACATCAT GTCTCTGCTACTACACAGGAGCTTTTGGAGAGCCATCCCAGCTTGCGTGCGCTGATTGTT GAGAACTCAAAAGGGAAGGCATGCTTTCAGGCTCCGGCCACATGCCCAGCAGCTCGAGGA TATGTCGAAAACAGGCCTTGGCCATACGTCGACGAATCTTGCAAAGATGGCATTTTCATG TTTGATGAAGACCACCTCGACAAACATGGAAGCCTTGCCTTGCATAAGCTTGTTACGGAA GAACTTAATGTCAACTTTCTTAATTCAGAAGGCAAGACTTCTCCACCGCTGCGTGTTTTC TCTGTTCTTGTTTATCACAATTCAAGCAGGCAACAAACTGCAATTCTGCTGAAAGCACAT GGTGCAACACTCGATCAAAAGTCAGTGAACATTGTTGTACAAGAGTTCTTAGCCAGATTG GATATGGCAGTAGAGGGAAAGCTGCATCAATCGTGGAGCATGAAGAGGGAAGAAGGCTTG CCTTCCCCATTTGAGGACCTTATTCCCAAAAGCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P50828 |
Definition |
sp|P50828|HEMO_PIG Hemopexin OS=Sus scrofa |
Align length |
39 |
Score (bit) |
33.1 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U4J6 |
Definition |
tr|A9U4J6|A9U4J6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
207 |
Score (bit) |
125.0 |
E-value |
2.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949905|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_D20, 5' (695 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U4J6|A9U4J6_PHYPA Predicted protein OS=Physcomitrella paten... 125 2e-27 tr|A9SEX7|A9SEX7_PHYPA Predicted protein OS=Physcomitrella paten... 124 4e-27 tr|A9RDM4|A9RDM4_PHYPA Predicted protein OS=Physcomitrella paten... 58 5e-07 tr|A9TXI6|A9TXI6_PHYPA Predicted protein OS=Physcomitrella paten... 56 3e-06 tr|A9RVX5|A9RVX5_PHYPA Predicted protein OS=Physcomitrella paten... 56 3e-06 tr|A9TT77|A9TT77_PHYPA Predicted protein OS=Physcomitrella paten... 53 2e-05 tr|Q9LXK3|Q9LXK3_ARATH Putative uncharacterized protein F3C22_10... 50 1e-04 tr|Q8H1S5|Q8H1S5_ARATH Putative uncharacterized protein At3g5261... 50 1e-04 tr|Q94CE8|Q94CE8_ARATH Putative uncharacterized protein At3g5261... 49 3e-04 tr|A5AIS5|A5AIS5_VITVI Putative uncharacterized protein OS=Vitis... 44 0.013 tr|A7PPB9|A7PPB9_VITVI Chromosome chr8 scaffold_23, whole genome... 42 0.029 tr|Q2HTF1|Q2HTF1_MEDTR Putative uncharacterized protein OS=Medic... 40 0.14 tr|Q94CW7|Q94CW7_ORYSJ Putative uncharacterized protein P0423B08... 38 0.54 tr|B8A708|B8A708_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.92 tr|Q6Q7Y4|Q6Q7Y4_PARPR Surface antigen S OS=Paramecium primaurel... 37 0.92 tr|Q011C6|Q011C6_OSTTA Meltrins, fertilins and related Zn-depend... 37 1.6 tr|Q2UB49|Q2UB49_ASPOR Predicted protein OS=Aspergillus oryzae G... 35 4.6 tr|B8NQU6|B8NQU6_ASPFL Putative uncharacterized protein OS=Asper... 35 4.6 tr|B3MA59|B3MA59_DROAN GF24681 OS=Drosophila ananassae GN=GF2468... 35 6.0 tr|A2F6P1|A2F6P1_TRIVA Ankyrin repeat protein, putative OS=Trich... 35 6.0 tr|A2E4I5|A2E4I5_TRIVA Putative uncharacterized protein OS=Trich... 35 6.0 tr|B8BFG8|B8BFG8_ORYSI Putative uncharacterized protein OS=Oryza... 34 7.8 tr|B6MW70|B6MW70_BRAFL Putative uncharacterized protein OS=Branc... 34 7.8 tr|B3S951|B3S951_TRIAD Putative uncharacterized protein OS=Trich... 34 7.8 tr|A2FQE2|A2FQE2_TRIVA Ankyrin repeat protein, putative OS=Trich... 34 7.8
>tr|A9U4J6|A9U4J6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173637 PE=4 SV=1 Length = 482
Score = 125 bits (315), Expect = 2e-27 Identities = 76/207 (36%), Positives = 110/207 (53%) Frame = +1
Query: 70 LTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENS 249 LTRV+ SEENW K TA G+GI V + +HHV+ +E++ H LRA VEN+ Sbjct: 11 LTRVMGPSEENWTKATALGTGIAVMTIAMRRLVESHHVAQACREVMYQHAMLRAQAVENA 70
Query: 250 KGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEELN 429 KGK A +E PWP SC+ G + D D + A++K+V +ELN Sbjct: 71 KGKLAILVKNDSVAP--CLEICPWPQTSSSCEAGDVTIEGD--DDGLADAVNKVVRDELN 126
Query: 430 VNFLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNIVVQEFLARLDMA 609 + F+NSE SPPL F V +Y +SR T I+L+ H LD+ S I ++FL L+ Sbjct: 127 IPFVNSENNPSPPLDFFQVHMYTETSRSHTIIVLRFHSGGLDRPSAYIASRQFLTALNAI 186
Query: 610 VEGKLHQSWSMKREEGLPSPFEDLIPK 690 V+G+ ++ + E+L+PK Sbjct: 187 VDGQTVGLPLNHGKDAILPTIEELVPK 213
>tr|A9SEX7|A9SEX7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229141 PE=4 SV=1 Length = 476
Score = 124 bits (312), Expect = 4e-27 Identities = 75/208 (36%), Positives = 108/208 (51%) Frame = +1
Query: 67 DLTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVEN 246 D TRVL SE NW K TA G+GI V + +H V+ QE+++ H +LRA +VE Sbjct: 10 DNTRVLGPSEYNWTKATALGTGIAVVAVALRRLVKSHQVALACQEVMDQHATLRAQVVET 69
Query: 247 SKGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEEL 426 KGK F A VE PWP ES G D D D + A++K+V +EL Sbjct: 70 PKGKLAFHIKGNSIAPN--VEIYPWPQTSESYSVGDITVDGD--DDGLAAAVNKVVRDEL 125
Query: 427 NVNFLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNIVVQEFLARLDM 606 N F+ E SPPL +F V +Y S + QT I+L+ H LD+ S ++ + +FL L+ Sbjct: 126 NTPFVIPEDSPSPPLNLFQVHMYTESFQSQTIIVLRFHSGGLDRPSASVALDQFLTALNS 185
Query: 607 AVEGKLHQSWSMKREEGLPSPFEDLIPK 690 V+G+ ++ + E+L+PK Sbjct: 186 IVDGQPVSLPHNPGKDAILPTIEELVPK 213
>tr|A9RDM4|A9RDM4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64687 PE=4 SV=1 Length = 329
Score = 58.2 bits (139), Expect = 5e-07 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Frame = +1
Query: 31 APAHCLTSVDMADLTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLE 210 APA +V+ L R + SEENW K A G+G+ VF + + V+ +E++ Sbjct: 2 APAQ---AVENGALARAMGSSEENWSKAMALGTGLSVFSITLRRQVESTQVAQACREVMN 58
Query: 211 SHPSLRALIVENSKGKACF--QAPATCPAARGYVENRPWPYVDESCK 345 H LR+ IVENSKG+ F ++ + P V + PWP D + + Sbjct: 59 QHAILRSQIVENSKGRYAFVVKSDSVVPT----VVSCPWPKDDNTSR 101
>tr|A9TXI6|A9TXI6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152305 PE=4 SV=1 Length = 509
Score = 55.8 bits (133), Expect = 3e-06 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 6/192 (3%) Frame = +1
Query: 76 RVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENSKG 255 R+L +E NW + + G+GI V G LF + + A + HP LR+ ++ G Sbjct: 49 RLLGDTEHNWCRAVSVGTGITVLGFLFRRLLNPLTLQAAIDIVQIQHPRLRSQLIW-IHG 107
Query: 256 KACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDED-HLDKHGSLALH-----KLVT 417 + FQ+ + V P P S K M DED HL S K V Sbjct: 108 RPAFQSQIVEDVSDDTV---PMP----SEKANSDMRDEDPHLISDSSEECDEKGWVKFVE 160
Query: 418 EELNVNFLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNIVVQEFLAR 597 EELN+N P+++F V +Y S ++A++L+ H A D+ S + V + L Sbjct: 161 EELNINIWPEREHCLQPVQLFVVRLY-LLSENRSAMILRIHTAACDRVSASTVSADILKA 219
Query: 598 LDMAVEGKLHQS 633 L + +L S Sbjct: 220 LSNVSKRELAAS 231
>tr|A9RVX5|A9RVX5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_178520 PE=4 SV=1 Length = 471
Score = 55.8 bits (133), Expect = 3e-06 Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 4/186 (2%) Frame = +1
Query: 46 LTSVDMADLTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSL 225 +T+ + TR L +E NW+ G+GI + LF+ I + QELL +P L Sbjct: 1 MTTPVLQTATRRLGKTEANWVAVVKTGTGISISSILFDRCIPAADLDFALQELLAKNPRL 60
Query: 226 RALI--VENSKGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSL- 396 R+ I E K + CF+ P + +R D + + D G + Sbjct: 61 RSKITYAEADKKQQCFETPDEVSITVPVIPSR---------FDSLLQSNGGAEDSEGEIR 111
Query: 397 -ALHKLVTEELNVNFLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNI 573 H + EELN F T P VF +Y S ++L+ H A D S I Sbjct: 112 EPWHLITEEELNTPF-----PTDCPFPVFECKLYILSD-SNCLVILRLHSAAADIASTGI 165
Query: 574 VVQEFL 591 +V++ + Sbjct: 166 IVKQIM 171
>tr|A9TT77|A9TT77_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_150224 PE=4 SV=1 Length = 459
Score = 53.1 bits (126), Expect = 2e-05 Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 10/214 (4%) Frame = +1
Query: 76 RVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENSKG 255 R L +E NW+ G+GI + LF I + A +++L HP LR+ I E + Sbjct: 8 RKLGKTEANWVAAVDEGTGITISSILFERRIPVTDLEAALRDVLALHPRLRSTI-EQAHN 66
Query: 256 KACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEELNVN 435 + FQ P T + + W E +E D H + +ELN+ Sbjct: 67 EFFFQTPETVSVSLSEI---VWSAQGE---------EEGDEDNRAQQLWHGITEDELNIP 114
Query: 436 FLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNIVVQEFLARL----- 600 + P+ VF +Y Q+ ++L+ H A D S I++++ ++ L Sbjct: 115 YQKC------PVPVFEPKLY-LLPESQSLLVLRLHAAAADMASTPIIIKQVVSSLYKRSG 167
Query: 601 -----DMAVEGKLHQSWSMKREEGLPSPFEDLIP 687 VE L + + +E L ED IP Sbjct: 168 TEKESAEGVEDNLEKLKLSEPQEVLLPCIEDAIP 201
>tr|Q9LXK3|Q9LXK3_ARATH Putative uncharacterized protein F3C22_10 OS=Arabidopsis thaliana GN=F3C22_10 PE=4 SV=1 Length = 465
Score = 50.4 bits (119), Expect = 1e-04 Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 2/208 (0%) Frame = +1
Query: 70 LTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENS 249 +TR + G+E +W + GG+GI V L + T ++ T +L HP+LR+ I ++ Sbjct: 1 MTRPVGGTEYSWCRAIDGGTGIAVIALLLSRTPKLQNLQNTLDKLQIYHPTLRSNIRFDA 60
Query: 250 KGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEELN 429 + F T AA +VE P+ V S I D+ D H + H E+N Sbjct: 61 SANS-FSFVVT-SAADSHVEIHPFDSV--STAQIIRDSDDPCADPHRIILEH-----EMN 111
Query: 430 VN-FLNSEGKTSPPLRVFSVLVYH-NSSRQQTAILLKAHGATLDQKSVNIVVQEFLARLD 603 N ++N RVF V +Y +Q + + + A +D+ + +++EF+ Sbjct: 112 KNTWINPHRWIKSESRVFIVSLYDLTDDGEQRILTFRLNTAAVDRTAAVTLLREFMKETA 171
Query: 604 MAVEGKLHQSWSMKREEGLPSPFEDLIP 687 G + + GL E+LIP Sbjct: 172 ADGFGNGPVVAATETAVGLGKAIEELIP 199
>tr|Q8H1S5|Q8H1S5_ARATH Putative uncharacterized protein At3g52610 OS=Arabidopsis thaliana GN=At3g52610 PE=2 SV=1 Length = 475
Score = 50.4 bits (119), Expect = 1e-04 Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 2/208 (0%) Frame = +1
Query: 70 LTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENS 249 +TR + G+E +W + GG+GI V L + T ++ T +L HP+LR+ I ++ Sbjct: 11 MTRPVGGTEYSWCRAIDGGTGIAVIALLLSRTPKLQNLQNTLDKLQIYHPTLRSNIRFDA 70
Query: 250 KGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEELN 429 + F T AA +VE P+ V S I D+ D H + H E+N Sbjct: 71 SANS-FSFVVT-SAADSHVEIHPFDSV--STAQIIRDSDDPCADPHRIILEH-----EMN 121
Query: 430 VN-FLNSEGKTSPPLRVFSVLVYH-NSSRQQTAILLKAHGATLDQKSVNIVVQEFLARLD 603 N ++N RVF V +Y +Q + + + A +D+ + +++EF+ Sbjct: 122 KNTWINPHRWIKSESRVFIVSLYDLTDDGEQRILTFRLNTAAVDRTAAVTLLREFMKETA 181
Query: 604 MAVEGKLHQSWSMKREEGLPSPFEDLIP 687 G + + GL E+LIP Sbjct: 182 ADGFGNGPVVAATETAVGLGKAIEELIP 209
>tr|Q94CE8|Q94CE8_ARATH Putative uncharacterized protein At3g52610 OS=Arabidopsis thaliana GN=At3g52610 PE=2 SV=1 Length = 475
Score = 48.9 bits (115), Expect = 3e-04 Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 3/209 (1%) Frame = +1
Query: 70 LTRVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENS 249 +TR + G+E +W + GG+GI V L + T ++ T +L HP+LR+ I ++ Sbjct: 11 MTRPVGGTEYSWCRAIDGGTGIAVIALLLSRTPKLQNLQNTLDKLQIYHPTLRSNIRFDA 70
Query: 250 KGKACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTE-EL 426 + F T AA +VE P+ +S + D D H+++ E E+ Sbjct: 71 SANS-FSFVVT-SAADSHVEIHPF----DSVSTAQIIRDSD----DPCAGPHRIILEHEM 120
Query: 427 NVN-FLNSEGKTSPPLRVFSVLVYH-NSSRQQTAILLKAHGATLDQKSVNIVVQEFLARL 600 N N ++N RVF V +Y +Q + + + A +D+ + +++EF+ Sbjct: 121 NKNTWINPHRWIKSESRVFIVSLYDLTDDGEQRILTFRLNTAAVDRTAAVTLLREFMKET 180
Query: 601 DMAVEGKLHQSWSMKREEGLPSPFEDLIP 687 G + + GL E+LIP Sbjct: 181 AADGFGNGPVVAATETAVGLGKAIEELIP 209
>tr|A5AIS5|A5AIS5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014691 PE=4 SV=1 Length = 465
Score = 43.5 bits (101), Expect = 0.013 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 1/205 (0%) Frame = +1
Query: 76 RVLTGSEENWLKGTAGGSGICVFGALFNTTIGTHHVSATTQELLESHPSLRALIVENSKG 255 R G+E +W K GG+GI L + + A +L ++P LR+ + + K Sbjct: 12 RAAGGTEYSWCKAVPGGTGITALAILLSKAPDFSLLQAALHKLQNAYPILRSKLHFDPKT 71
Query: 256 KACFQAPATCPAARGYVENRPWPYVDESCKDGIFMFDEDHLDKHGSLALHKLVTEELNVN 435 A P Y++ + D S GI D + H++ +LN+N Sbjct: 72 NAFSFFTTQNP----YLQLETF---DLSSTSGILQTLPDP-ETDSVSPFHRIFEHQLNLN 123
Query: 436 -FLNSEGKTSPPLRVFSVLVYHNSSRQQTAILLKAHGATLDQKSVNIVVQEFLARLDMAV 612 + N + ++ +F VY S + + L+ H A D+ S ++++ LA + Sbjct: 124 TWHNPDPSSNTETDLFFASVY-TLSNDEWVVTLRLHTAACDRTSAVALLRKLLALMGGGR 182
Query: 613 EGKLHQSWSMKREEGLPSPFEDLIP 687 E +L ++E L ED+IP Sbjct: 183 EKEL------EKETELSLGIEDMIP 201
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