DK949935 |
Clone id |
TST38A01NGRL0007_F02 |
Library |
TST38 |
Length |
677 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_F02. 5' end sequence. |
Accession |
DK949935 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL292Contig1 |
Sequence |
CGGAATATGTTTGTCGTCTGCAACATTACCAAAGATCGCCATCGCCCAAAACTAAGTGTT GCTGCAGCAGAGGTTTTGCCCTCCTCTTGGAATACTACATGCATCGGGACAATGGATTTG TGGTGATCTCTAGGGTTCGCACTTCATGGAAAACCTGGCTGCGATGCCACACTTCGTCAC AAAAAATATGGAACCTGATTTTCTTGGCCTAGGGTTGTCGCTTCCCCCGCTTTCATGGTT GGATGTTCGGGTCTTTTATGTGAGGCTGAGCTGCTGCTCACTTGATGATGCACCGGACAC TCTGACAATTAAATTTGGTCCCAGGCCTATTGCCTGCACCTTTGAAATCAACGGATGCAA AGTTCCTGCCTCAGAGGAGCCCATCTCCACTCTTCGCAGGGACAGAGTCGACAGAGAATC TTCTGAGGTTACCTATGTTGGAACGGATAGACTTCGCACCACAGGTTCATTGTCCTTTGA AGTTTGTCATAAAGAAGAAACCCTTATTTGTGGAGCTATGGAAAATACAGAGGTATGGCT AGATGGACAAGGTATTGGCAGGATTGGTGCTGTTGGTACCCTTAACAAAAGGTACAAAGC AGAGTGGGTTATGGAGTGTAAGTGTGCCATCTCATCAGCATCATGCATTTTCTTGAAGAG ACGAGTGGACCCAATGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NWH1 |
Definition |
sp|Q6NWH1|WDR32_DANRE WD repeat-containing protein 32 OS=Danio rerio |
Align length |
113 |
Score (bit) |
36.2 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SBR1 |
Definition |
tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
145 |
Score (bit) |
155.0 |
E-value |
2.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949935|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_F02, 5' (677 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36 tr|A9NUE2|A9NUE2_PICSI Putative uncharacterized protein OS=Picea... 127 5e-28 tr|A9T096|A9T096_PHYPA Predicted protein OS=Physcomitrella paten... 127 8e-28 tr|Q9LMM9|Q9LMM9_ARATH F22L4.6 protein OS=Arabidopsis thaliana G... 107 9e-22 tr|Q8L9M0|Q8L9M0_ARATH Putative uncharacterized protein OS=Arabi... 107 9e-22 tr|Q8GUH2|Q8GUH2_ARATH Expressed protein (Putative uncharacteriz... 107 9e-22 tr|A7PZJ0|A7PZJ0_VITVI Chromosome chr15 scaffold_40, whole genom... 106 2e-21 tr|O23703|O23703_ARATH Putative uncharacterized protein OS=Arabi... 105 3e-21 tr|A9P1C5|A9P1C5_PICSI Putative uncharacterized protein OS=Picea... 101 4e-20 tr|O03988|O03988_ARATH Putative uncharacterized protein (Fragmen... 101 5e-20 tr|Q9LN54|Q9LN54_ARATH F18O14.16 OS=Arabidopsis thaliana PE=4 SV=1 90 1e-16 tr|Q8VYC6|Q8VYC6_ARATH Putative uncharacterized protein At1g1940... 90 1e-16 tr|B7FIE6|B7FIE6_MEDTR Putative uncharacterized protein (Fragmen... 87 1e-15 tr|Q8H8N0|Q8H8N0_ORYSJ Putative uncharacterized protein OSJNBa00... 86 3e-15 tr|Q10DL9|Q10DL9_ORYSJ Os03g0775600 protein OS=Oryza sativa subs... 86 3e-15 tr|Q10DL7|Q10DL7_ORYSJ cDNA clone:002-102-B02, full insert seque... 86 3e-15 tr|B8AKK9|B8AKK9_ORYSI Putative uncharacterized protein OS=Oryza... 86 3e-15 tr|A9U3I7|A9U3I7_PHYPA Predicted protein OS=Physcomitrella paten... 86 3e-15 tr|A7P916|A7P916_VITVI Chromosome chr3 scaffold_8, whole genome ... 86 3e-15 tr|A7NTC9|A7NTC9_VITVI Chromosome chr18 scaffold_1, whole genome... 85 4e-15 tr|B7FIZ3|B7FIZ3_MEDTR Putative uncharacterized protein (Fragmen... 84 6e-15 tr|A5B6C8|A5B6C8_VITVI Putative uncharacterized protein OS=Vitis... 83 1e-14 tr|Q8LEK6|Q8LEK6_ARATH Putative uncharacterized protein OS=Arabi... 82 4e-14 tr|Q9FRK9|Q9FRK9_ARATH Putative uncharacterized protein F22H5.9 ... 81 5e-14 tr|Q8H0Z2|Q8H0Z2_ARATH Putative uncharacterized protein At1g7518... 81 5e-14 tr|Q8VXX6|Q8VXX6_ARATH Putative uncharacterized protein At1g7518... 80 9e-14 tr|B6TBZ5|B6TBZ5_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09 tr|B4FXF3|B4FXF3_MAIZE Putative uncharacterized protein OS=Zea m... 65 5e-09 tr|A7QJ69|A7QJ69_VITVI Chromosome chr2 scaffold_105, whole genom... 53 2e-05 tr|Q8L654|Q8L654_ORYSJ Putative uncharacterized protein OJ1203D0... 50 1e-04
>tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127192 PE=4 SV=1 Length = 316
Score = 155 bits (393), Expect = 2e-36 Identities = 74/145 (51%), Positives = 95/145 (65%) Frame = +2
Query: 236 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 415 W DVRV YVR++ C LDDAP++LTI+F R I E+NG ++ SEE L+RDRVD Sbjct: 25 WFDVRVIYVRVTECPLDDAPESLTIRFPARSIGTALEVNGARISPSEEVCLVLKRDRVDT 84
Query: 416 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 595 +SSE TY+ TD LRT+GSL FEV HKEE L+CGA+E ++ D + A+ T K Sbjct: 85 DSSEATYLSTDNLRTSGSLKFEVLHKEEVLLCGALEQSQPAADAEEYKGSEAISTPEKTT 144
Query: 596 KAEWVMECKCAISSASCIFLKRRVD 670 K W MEC CA+ + C+FLK R D Sbjct: 145 KLGWTMECACAVGQSGCVFLKGRHD 169
>tr|A9NUE2|A9NUE2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 324
Score = 127 bits (320), Expect = 5e-28 Identities = 67/142 (47%), Positives = 87/142 (61%), Gaps = 1/142 (0%) Frame = +2
Query: 236 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 415 W +VR+FYVR+S C L+ AP +LT++ R + EING ++P +E TLRRDRVD+ Sbjct: 40 WFEVRLFYVRVSSCPLEGAPQSLTLRHHHRTVGVALEINGTRIPPAESVSLTLRRDRVDK 99
Query: 416 ESSEVTYVGTDRLRTTGSLSFEVCHKEET-LICGAMENTEVWLDGQGIGRIGAVGTLNKR 592 ES+E TYV TD +RTTG+L FEVC+ EET L+CGA+E E D QG+ Sbjct: 100 ESAEATYVSTDSVRTTGTLDFEVCYDEETLLLCGALERLEQGSDHQGV------------ 147
Query: 593 YKAEWVMECKCAISSASCIFLK 658 K W M+C AI C F K Sbjct: 148 -KELWGMDCCSAIGPGVCPFGK 168
>tr|A9T096|A9T096_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138294 PE=4 SV=1 Length = 303
Score = 127 bits (318), Expect = 8e-28 Identities = 63/145 (43%), Positives = 89/145 (61%) Frame = +2
Query: 236 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 415 W DVRV YVR++ CS ++ PD+LTI+F PR I T E+NG + +EE LRRDRVD Sbjct: 19 WFDVRVIYVRITGCSPEEDPDSLTIRFPPRTIGVTLEVNGGWISPTEESCVVLRRDRVDS 78
Query: 416 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 595 E++E TYV TD LR G++ +EV +KEE ++ G +E+ E L+ G+ +K+ Sbjct: 79 ETAEATYVSTDNLRICGTICYEVVNKEEVIVSGTLEHVENCLELIH----GSKECFSKKD 134
Query: 596 KAEWVMECKCAISSASCIFLKRRVD 670 W MEC+C ++ C F K R D Sbjct: 135 DQAWAMECRCVAGNSGCFFNKSRQD 159
>tr|Q9LMM9|Q9LMM9_ARATH F22L4.6 protein OS=Arabidopsis thaliana GN=F22L4.6 PE=4 SV=1 Length = 1284
Score = 107 bits (266), Expect = 9e-22 Identities = 58/156 (37%), Positives = 84/156 (53%) Frame = +2
Query: 170 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 349 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 350 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 529 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 530 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAISS 637 E G G V K W M+C A+ + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGN 165
>tr|Q8L9M0|Q8L9M0_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 327
Score = 107 bits (266), Expect = 9e-22 Identities = 58/156 (37%), Positives = 84/156 (53%) Frame = +2
Query: 170 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 349 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 350 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 529 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 530 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAISS 637 E G G V K W M+C A+ + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGN 165
>tr|Q8GUH2|Q8GUH2_ARATH Expressed protein (Putative uncharacterized protein At1g01500) (At1g01500) OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1 Length = 327
Score = 107 bits (266), Expect = 9e-22 Identities = 58/156 (37%), Positives = 84/156 (53%) Frame = +2
Query: 170 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 349 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 350 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 529 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 530 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAISS 637 E G G V K W M+C A+ + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGN 165
>tr|A7PZJ0|A7PZJ0_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026897001 PE=4 SV=1 Length = 266
Score = 106 bits (264), Expect = 2e-21 Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Frame = +2
Query: 239 LDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDRE 418 L++R+FYVR++ C +D PD LT+ R I + EING ++PASE TLRRDR+D+E Sbjct: 37 LEIRLFYVRIAPCVIDSVPDHLTLCHIRRGIGVSLEINGARIPASETASLTLRRDRLDKE 96
Query: 419 SSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTE-VWLDGQ 550 SSEV YV TD +R G + FEV KEE ++CG++E E W +G+ Sbjct: 97 SSEVIYVSTDSVRVAGGVEFEVYEKEEMILCGSLERMESSWGNGK 141
>tr|O23703|O23703_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 311
Score = 105 bits (262), Expect = 3e-21 Identities = 55/134 (41%), Positives = 80/134 (59%) Frame = +2
Query: 236 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 415 WL+VR+FYVR++ C +++ PD LT++ R + E+NG +VP+S+ LRRDRVDR Sbjct: 22 WLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRVDR 81
Query: 416 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 595 ESSEVTYV T+ +R TG + FEV E+ ++CG ++ E G G V Sbjct: 82 ESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIE------GAWNNGTVSD----P 131
Query: 596 KAEWVMECKCAISS 637 K W M+C A+ + Sbjct: 132 KTGWGMDCYIAMGN 145
>tr|A9P1C5|A9P1C5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 309
Score = 101 bits (252), Expect = 4e-20 Identities = 44/96 (45%), Positives = 62/96 (64%) Frame = +2
Query: 236 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 415 W D++VFY+++ C D AP +LT+ + PR + EING ++ S TLRR+ +D Sbjct: 25 WFDIKVFYIKIDACGFDPAPGSLTVHYAPRSSSTELEINGKRIRPSASAFLTLRRNGIDE 84
Query: 416 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAME 523 +S TYV TD RTTG + F+VC +EETLICG +E Sbjct: 85 NASVATYVSTDVTRTTGKVCFDVCVREETLICGTLE 120
>tr|O03988|O03988_ARATH Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 277
Score = 101 bits (251), Expect = 5e-20 Identities = 54/133 (40%), Positives = 79/133 (59%) Frame = +2
Query: 239 LDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDRE 418 L+VR+FYVR++ C +++ PD LT++ R + E+NG +VP+S+ LRRDRVDRE Sbjct: 1 LEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRVDRE 60
Query: 419 SSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRYK 598 SSEVTYV T+ +R TG + FEV E+ ++CG ++ E G G V K Sbjct: 61 SSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIE------GAWNNGTVSD----PK 110
Query: 599 AEWVMECKCAISS 637 W M+C A+ + Sbjct: 111 TGWGMDCYIAMGN 123
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