DK949937 |
Clone id |
TST38A01NGRL0007_F04 |
Library |
TST38 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_F04. 5' end sequence. |
Accession |
DK949937 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1124Contig1 |
Sequence |
GTGGAGCAGGAGGCTCAGGGCGGTTCTGCAGTAGGGCAGGGTTCTCGAGCAGGACTAGCT GGTAGGGGTGGGGGTTTTGCCAAGCAATGGCTATCTCTGGGGTGAGCTATTGGGTTGCTT CGTCATCTCCTACCGCACCCTACCCGTGCCGGCCCAGATTTTTTGACCACATAAGAGAGC TTTCTACTCCCGCCTCCTACGGGAGGAGACCAGTTGGTGAGCGTCTCGCCCTTGCGGGCC CTTCACTCTTGCGTGGCAGGCGATGGAGGTCCTGGTGGTAGCAAGGGATTTGTCAGCTCT GGCTCGGCTCCCCTTTTTTAGCCTGCTCCCTTGGTGGATCTACTGGTTGTAGTACTTTGT GGTGATCAATTGGTCTACGGTGGACTTTTCTTTCCGTTGGTGCTCAGATTCTAGTCCGCT CATGCTCGCCTTGGTGAATCTGGGTTTTGTGGCTTTTTGTGGAGGCTCTCTGAGGCAGGC ATCTTGCTGGTGGTAACGGCTGTGTCCTGGTCGCACCTTCAGGAGCTTCTGCTGGTGATG GGATGATGGGCCCCACATGTTCGGATTTTATTTCTCCTCCTTGGCCTTTTGTTCTTCTCT AGGATTTTATCTGTCCAGGGTGGCTCCCCTGTTAGCCATTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6ZU64 |
Definition |
sp|Q6ZU64|CC108_HUMAN Coiled-coil domain-containing protein 108 OS=Homo sapiens |
Align length |
28 |
Score (bit) |
33.5 |
E-value |
0.97 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7HS60 |
Definition |
tr|A7HS60|A7HS60_PARL1 17 kDa surface antigen OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) |
Align length |
75 |
Score (bit) |
40.0 |
E-value |
0.12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949937|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_F04, 5' (642 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7HS60|A7HS60_PARL1 17 kDa surface antigen OS=Parvibaculum la... 40 0.12 tr|A9CII4|A9CII4_AGRT5 OmpA family protein OS=Agrobacterium tume... 40 0.16 tr|B3MSD2|B3MSD2_DROAN GF21443 OS=Drosophila ananassae GN=GF2144... 37 0.78 tr|Q0UFN6|Q0UFN6_PHANO Putative uncharacterized protein OS=Phaeo... 37 1.0 tr|Q5Z642|Q5Z642_ORYSJ HGWP repeat containing protein-like OS=Or... 36 2.3 tr|Q17AE1|Q17AE1_AEDAE Putative uncharacterized protein OS=Aedes... 36 2.3 tr|Q7S8Z9|Q7S8Z9_NEUCR Putative uncharacterized protein OS=Neuro... 36 2.3 tr|Q2IIK2|Q2IIK2_ANADE Putative uncharacterized protein OS=Anaer... 35 3.0 tr|B6L1Z8|B6L1Z8_BRAFL Putative uncharacterized protein OS=Branc... 35 3.0 tr|B3MEE0|B3MEE0_DROAN GF13017 OS=Drosophila ananassae GN=GF1301... 35 3.0 tr|A9V4H9|A9V4H9_MONBE Predicted protein OS=Monosiga brevicollis... 35 3.0 tr|Q8MXD8|Q8MXD8_CAEEL Kettin (Drosophila actin-binding) homolog... 35 3.0 tr|Q8MXD7|Q8MXD7_CAEEL Kettin (Drosophila actin-binding) homolog... 35 3.0 tr|A7DT47|A7DT47_CAEEL Kettin (Drosophila actin-binding) homolog... 35 3.0 tr|A8LF92|A8LF92_FRASN Putative uncharacterized protein OS=Frank... 35 3.9 tr|A1B7Z2|A1B7Z2_PARDP Sensor protein OS=Paracoccus denitrifican... 35 3.9 tr|B3MM99|B3MM99_DROAN GF14339 OS=Drosophila ananassae GN=GF1433... 35 3.9 tr|B0WK58|B0WK58_CULQU Putative uncharacterized protein OS=Culex... 35 3.9 tr|Q2VIL6|Q2VIL6_PONPY RcCTAGE5 (Fragment) OS=Pongo pygmaeus PE=... 35 5.1 tr|Q7S4G0|Q7S4G0_NEUCR Putative uncharacterized protein OS=Neuro... 35 5.1 tr|B4X0H5|B4X0H5_9GAMM GMC oxidoreductase family OS=Alcanivorax ... 35 5.1 tr|Q4DLD9|Q4DLD9_TRYCR Putative uncharacterized protein (Fragmen... 30 5.7 tr|B8CB97|B8CB97_THAPS Predicted protein OS=Thalassiosira pseudo... 34 6.6 tr|A8HPQ1|A8HPQ1_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 6.6 tr|Q7ZVB3|Q7ZVB3_DANRE Mediator complex subunit 14 OS=Danio reri... 34 8.7 tr|A1A5F7|A1A5F7_XENTR Zswim5 protein OS=Xenopus tropicalis GN=z... 34 8.7 tr|Q212Z9|Q212Z9_RHOPB MotA/TolQ/ExbB proton channel OS=Rhodopse... 34 8.7 tr|A9WG95|A9WG95_CHLAA Helicase OS=Chloroflexus aurantiacus (str... 34 8.7 tr|A4VH15|A4VH15_PSEU5 Type II secretory pathway, component ExeA... 34 8.7 tr|B8HUA9|B8HUA9_9CHRO Translation initiation factor IF-2 OS=Cya... 34 8.7
>tr|A7HS60|A7HS60_PARL1 17 kDa surface antigen OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=Plav_1122 PE=3 SV=1 Length = 430
Score = 40.0 bits (92), Expect = 0.12 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -3
Query: 472 QRASTKSHKTQIHQGEHERTRI*APTERKVHRRPIDHHKVLQPV--DPP---REQAKKGE 308 QRA + + +HQ E +R R AP +R H + ++H + +PV D P AK Sbjct: 183 QRAEQQRQRQHVHQNERDRQRYQAPPDRGSHYKQVNHRQTYRPVYKDRPWYGHHYAKGHR 242
Query: 307 PSQS*QIPCYHQDLH 263 PS + Y H Sbjct: 243 PSHRGPVVIYRNSYH 257
>tr|A9CII4|A9CII4_AGRT5 OmpA family protein OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=AGR_C_3445 PE=3 SV=1 Length = 746
Score = 39.7 bits (91), Expect = 0.16 Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Frame = -3
Query: 538 SPAEAPEGATRTQPLPPARCLPQRASTKSHKTQIHQGEHERTRI--------*APTERKV 383 +P E + R +P P PQ K + Q QGE E+ AP E++ Sbjct: 112 APPEPQQREARPEPAPAPAEQPQERPRKPERAQEPQGEGEQRPARQREAAPEAAPAEQQP 171
Query: 382 HRRPIDHHKVLQPV----DPPREQAKKGEPSQS*QIPCYHQDLHRLPRKSEGPARARRSP 215 RP K QP P K+ EP++ P Q P +E PA+ R Sbjct: 172 QERPRKPQKAEQPAGEGEQRPERPRKEKEPAKE---PAAEQQPAARPENAEQPAKPREPA 228
Query: 214 TGLLP 200 G P Sbjct: 229 PGKKP 233
>tr|B3MSD2|B3MSD2_DROAN GF21443 OS=Drosophila ananassae GN=GF21443 PE=4 SV=1 Length = 507
Score = 37.4 bits (85), Expect = 0.78 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Frame = -3
Query: 517 GATRTQPLPPARCLPQRASTKSH-KTQIHQGEHERTRI*APTERKVHRRPIDHHKVLQPV 341 G T T + R PQ T H + Q HQ +H++ + +++ H +P HH+ QP Sbjct: 144 GETFTANMGSQRYQPQGHQTHHHNQQQQHQQQHQQQQ----HQQQQHHQPQHHHQ--QPQ 197
Query: 340 DPPREQAKKGEPSQS*QIPCYHQDLHRLPRKSEGP 236 PP++Q +P Q+ H H+LP + P Sbjct: 198 QPPQQQ--HHQPHHQPQLQSQH---HQLPHQQAPP 227
>tr|Q0UFN6|Q0UFN6_PHANO Putative uncharacterized protein OS=Phaeosphaeria nodorum GN=SNOG_09428 PE=4 SV=2 Length = 1094
Score = 37.0 bits (84), Expect = 1.0 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Frame = -3
Query: 562 EHVGPIIPSPA---EAPEGATRTQPLPPARCLPQRASTKSHKTQIHQ-GEHERTRI*APT 395 E V P + S A E P ++R P+P A+ P+R T + + + G +E++ PT Sbjct: 139 EPVKPTVSSAAKKSEEPMQSSRAPPVPAAQA-PRRGKTPQPASTLEKDGGNEQSS--QPT 195
Query: 394 ERKVHRRPIDHHKVLQPVDPPREQAKKGEPS 302 KV +P+ K + PP +QA K +P+ Sbjct: 196 IAKVKTKPVAQPKKPTVLQPPAQQATKEKPA 226
>tr|Q5Z642|Q5Z642_ORYSJ HGWP repeat containing protein-like OS=Oryza sativa subsp. japonica GN=P0567G03.29 PE=4 SV=1 Length = 292
Score = 35.8 bits (81), Expect = 2.3 Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 2/116 (1%) Frame = -3
Query: 541 PSPAEAPEGATRTQPLPPARCLPQRASTKSHKTQIHQGEHERTRI*APTERKVHRRPIDH 362 PSP+ AP R LPP P AS + + R P+ER+ HR P + Sbjct: 109 PSPSSAPVRRRRRSGLPPGSAPPPSASPHRRRPRPRLRFARR-----PSERRRHRHP-EP 162
Query: 361 HKVLQPVDP--PREQAKKGEPSQS*QIPCYHQDLHRLPRKSEGPARARRSPTGLLP 200 + L P+ P P +GEP + + L R+P + R R S G P Sbjct: 163 RRRLPPLRPPFPPPSLSRGEPWTVPFVSPF-PPLSRVPLRRAVGRRRRPSGRGCAP 217
>tr|Q17AE1|Q17AE1_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL005333 PE=4 SV=1 Length = 687
Score = 35.8 bits (81), Expect = 2.3 Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 12/134 (8%) Frame = -3
Query: 574 EIKSEHVGPII------PSPAEAPEGATRTQPLPPARCLPQRASTKSHKTQIHQGEHERT 413 E+++ H GP + P P++A + T+ P+P +P+ + + + E E+ Sbjct: 215 EMETYHPGPRVMSPYRNPDPSQAVQVLTKPLPMPDPNFVPKPILKRPSTEILTKDEKEKK 274
Query: 412 RI*APTERKV------HRRPIDHHKVLQPVDPPREQAKKGEPSQS*QIPCYHQDLHRLPR 251 + ERK + P + P+ P + K+ P +IP P Sbjct: 275 IAPSKPERKSLSNIFDRKSPAKEERKPSPIRTPPQVEKENTPEVEVKIP--------EPP 326
Query: 250 KSEGPARARRSPTG 209 +S P+ +++PTG Sbjct: 327 QSPEPSSEKQAPTG 340
>tr|Q7S8Z9|Q7S8Z9_NEUCR Putative uncharacterized protein OS=Neurospora crassa GN=NCU05301 PE=4 SV=1 Length = 855
Score = 35.8 bits (81), Expect = 2.3 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Frame = -3
Query: 574 EIKSEHVGPIIPSPA----EAPEGATRTQPLPPARC---LPQRASTKSHKTQIHQGEHER 416 E+K+E V P+ +PA A E AT T PA P+ + + Q QG +E Sbjct: 532 EVKAEEVAPVEETPATEEPAAKEEATETPAETPAETPKEAPKEGEAQPERKQKQQGSYEE 591
Query: 415 TRI*APTERKVHRRPIDHHKVLQ--PVDPPREQAKKGEPSQS 296 P + +V + D +K+ P D + GEP+++ Sbjct: 592 PFKYLPADHEVIKNIADFYKISPRFPADRYMIRNATGEPAKA 633
>tr|Q2IIK2|Q2IIK2_ANADE Putative uncharacterized protein OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_1706 PE=4 SV=1 Length = 413
Score = 35.4 bits (80), Expect = 3.0 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 7/142 (4%) Frame = -3
Query: 625 SHPGQIKS*RRTKGQ-GGEIKSEHVGPII--PSPAEAP----EGATRTQPLPPARCLPQR 467 +HP + RR + GGEI P P AEAP EGA + + LP A +R Sbjct: 145 AHPHAGRKLRRELAERGGEIHRPDGAPARRRPQRAEAPLQIAEGALQARQLPGA----ER 200
Query: 466 ASTKSHKTQIHQGEHERTRI*APTERKVHRRPIDHHKVLQPVDPPREQAKKGEPSQS*QI 287 + + +G R R+ ER+ R I + P R Q ++G P + ++ Sbjct: 201 QAGREEPQHGGRGAGPRQRL---AERRGDRAQI--RRARPRARPRRRQRRRGGPRER-RV 254
Query: 286 PCYHQDLHRLPRKSEGPARARR 221 H+++ R PR+ RARR Sbjct: 255 GPQHREVARRPRRHPHHHRARR 276
>tr|B6L1Z8|B6L1Z8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_65137 PE=4 SV=1 Length = 434
Score = 35.4 bits (80), Expect = 3.0 Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 8/144 (5%) Frame = -3
Query: 637 G*QGSHPGQIKS*RRTKGQGGEIKSEHVGPIIPSPAEAPEGATRTQPLPPARCLPQRAST 458 G +G K+ + T + ++ GP+ P E + + PP++ +A + Sbjct: 30 GSKGQEQKSAKAEKPTGQEKDDLLDIFAGPVEVKPREQLKVQMEEEDAPPSK---GKAKS 86
Query: 457 KSHKTQIHQGEHERTRI*APTERKV--HRRPIDHHKVLQPVDPPR----EQAKKGE--PS 302 K K E R T+ K HR+ +VL PV PP +Q K+ E P Sbjct: 87 KKDKNPFSFKEFLRESATKSTKAKSSPHRKTPPEQRVLPPVSPPESSTFQQHKEDELPPV 146
Query: 301 QS*QIPCYHQDLHRLPRKSEGPAR 230 S ++P + QD KS P + Sbjct: 147 TSTELPDFVQDYFLTDTKSSIPEK 170
>tr|B3MEE0|B3MEE0_DROAN GF13017 OS=Drosophila ananassae GN=GF13017 PE=4 SV=1 Length = 2030
Score = 35.4 bits (80), Expect = 3.0 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 16/93 (17%) Frame = -3
Query: 583 QGGEIKSEHVG-PIIPSPAEAPEGATRTQ-PLPPARCLPQRASTKSHKTQI--------- 437 +GG +SE P PSPA AP ++ P PPA +P + +H+T+ Sbjct: 13 RGGSQQSEPATTPTPPSPASAPPSLPASKHPYPPAELMPSPGAAAAHRTRTPGDPYHLGY 72
Query: 436 --HQGEHERTRI*APTERKVHRR---PIDHHKV 353 H G+H A K R P DHH+V Sbjct: 73 PPHPGQHFYPPHMAGASAKSTGRASAPPDHHQV 105
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