DK949953 [AcEST]

DK949953
Clone id	TST38A01NGRL0007_F20
Library	TST38
Length	703
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_F20. 5' end sequence.
Accession	DK949953
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL7Contig5
Sequence	CACACACACACACACACAGTACACACACGCGCATGCACTCCCAAAATTTCGACACAGTAA TCACTCCAACCTCATCGATCCATTCTGCTAATCACACAAAATCGCCCATAATTGGTCGGG CTAATTTCAGCCACAATTCGCCTGCAAAATAACCTCCCGTTCCTTAATTTCACCCGAATT ACCCATTATCTGTAGCTGATCAGCACACTTTTAGATTTTCCAATCATATTGTACCTATCA TAATTAGCATTAAGGGCCCTTAATACATGGATCCCTTCACTCAGCTTCAATTCTCTGCAT TTGGTCGAGGCGCGGTCGAGGCGCGCTGCAATGGCAGCTGCTGACCAGCTTTGAGCTCCC ATTCTCTGCTCATGAGCATAATATAGAAGCTCGGCAGCTCGTCCAACAAATGTGGCTTGC GTGGAGAAGACGAGACATGAACAAATTATTTGCAGGGCCGCCACACCCTCATCAGAAAAT GATGATCAGCCAGGGACGATGCGAATTTTCTTGTGGAGATAATGTCGCTTAATGCAGCTG CTGCCTCTGGCATCACTAGGGCTTGCATGGAGTAGAGGAGATATCAACAAATTACTTGCT GGCACCACATCGGAACATCGTTATCAGCAGATGATGATCAGCGAAGGTTATGAAACGGGG CTTGTCTTGCAGAGGTTTTACCAACAGTGCCGCTTGCTACCTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9BG98
Definition	sp\|Q9BG98\|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus cuniculus
Align length	57
Score (bit)	31.2
E-value	5.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK949953\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_F20, 5' (703 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9BG98\|KCMA1_RABIT Calcium-activated potassium channel subuni... 31 5.7 >sp\|Q9BG98\|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus cuniculus GN=KCNMA1 PE=2 SV=1 Length = 1179 Score = 31.2 bits (69), Expect = 5.7 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -2 Query: 468 GCGGPANNLFMSRLLHASHICWTSCRASILCS*AENGSSKLVSSCHCSAPRPRLDQM 298 G GG + L MS +HASH+ S AS S + + SS SS S P++D + Sbjct: 17 GGGGGGSGLRMSSNIHASHL---SLDASSSSSSSSSSSSSSSSSSSSSVHEPKMDAL 70
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK949953\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_F20, 5' (703 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****