| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950021|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_I19, 5'
(654 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 169 2e-41
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 168 2e-41
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 160 4e-39
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 159 9e-39
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 156 1e-37
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 156 1e-37
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 154 4e-37
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 148 2e-35
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 147 5e-35
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 131 3e-30
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 125 3e-28
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 105 2e-22
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 99 2e-20
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 89 3e-17
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 89 3e-17
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 86 1e-16
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 86 2e-16
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 85 3e-16
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 85 4e-16
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 85 4e-16
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 84 8e-16
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 84 8e-16
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14... 82 2e-15
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 81 5e-15
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 79 2e-14
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 79 2e-14
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 79 2e-14
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 79 2e-14
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 79 2e-14
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 79 2e-14
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233
Score = 169 bits (427), Expect = 2e-41
Identities = 88/154 (57%), Positives = 111/154 (72%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDA 188
G V++ EVIY++E+ RSRGFGFVTMS+VE+ A+E L+G D GR L VN +
Sbjct: 79 GVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVN---KAAPRG 135
Query: 189 PTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFV 368
RAPR D S +++VGNL W VD L LFSEHGKV+ ARVV+DRETGRSRGFGFV
Sbjct: 136 SPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFV 195
Query: 369 TMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
TMS+E+EVN A+ +DG ++GR +RVN+A ERP
Sbjct: 196 TMSSESEVNDAIAALDGQTLDGRAVRVNVAEERP 229
Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
KLFVGNL + VD L +F G V A V+ +RET RSRGFGFVTMST E +A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 411 MDGAAIEGRNLRVNMAGERPS----SRSDF 488
++G ++GR L VN A R S R DF
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDF 145
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 168 bits (426), Expect = 2e-41
Identities = 90/159 (56%), Positives = 118/159 (74%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+EK + D GR L VN RG
Sbjct: 172 QAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRG 230
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
P RAPR+ + + +++VGNL W VD+G L LFSEHGKV+EARVV DRETGRSRGFG
Sbjct: 231 SRPE-RAPRVYEP-AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFG 288
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
FVTMS E+N+A++ +DG +EGR +RVN+A ERP R
Sbjct: 289 FVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRR 327
Score = 72.0 bits (175), Expect = 3e-12
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +3
Query: 63 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 224
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148
Query: 225 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 404
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 405 NKMDGAAIEGRNLRVNMAGERPS 473
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 315
Score = 160 bits (406), Expect = 4e-39
Identities = 85/162 (52%), Positives = 118/162 (72%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G V++ EVIY++++ +SRGFGFVTMS+VE+ A+E + D GR L VN R RG
Sbjct: 158 QAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAAR-RG 216
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
+ P R PR + S +++VGN+ WG+DD L LFSEHGKV+ ARVV DRETGRSRGFG
Sbjct: 217 ERPE-RPPRTFEQ-SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFG 274
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDF 488
FVTM++EAE++ A+ +DG +++GR +RVN+A +R S R+ F
Sbjct: 275 FVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR-SRRNTF 315
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
KLFVGNL + VD L LF + G V A V+ +R+T +SRGFGFVTMST E +A+
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 411 MDGAAIEGRNLRVNMA---GERP 470
+ + GR L VN A GERP
Sbjct: 197 YNRYDVNGRLLTVNKAARRGERP 219
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276
Score = 159 bits (403), Expect = 9e-39
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E D GR L VN RG
Sbjct: 119 QAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN-KAAPRG 177
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
P RAPR Q + +++VGN+ W +DD L +FSEHGKV+ ARVV DRE+GRSRGFG
Sbjct: 178 SRPE-RAPRTFQP-TYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFG 235
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
FVTMS+EAE+++A+ +DG ++GR +RVN A ERP
Sbjct: 236 FVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERP 271
Score = 72.0 bits (175), Expect = 3e-12
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +3
Query: 72 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN--RNRGDAPTPRAPRMDQNNSNKLFVG 245
FV++ S ED NT + LD + G +FP+ G+ + P D KLFVG
Sbjct: 55 FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEEYQEPSEDA----KLFVG 102
Query: 246 NLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAA 425
NL + +D L LF + G V A V+ +RET RSRGFGFVTMST E ++A+
Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYD 162
Query: 426 IEGRNLRVNMAGERPS 473
+ GR L VN A R S
Sbjct: 163 LNGRLLTVNKAAPRGS 178
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273
Score = 156 bits (394), Expect = 1e-37
Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 4/163 (2%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF--PNRN 176
+ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ +G + GR LRVN P
Sbjct: 109 RAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEK 168
Query: 177 RGDAPTPRAPRMDQN--NSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRS 350
R ++ R + +SN+++VGNLAWGVD L LFSE GKV++A+VV DR++GRS
Sbjct: 169 RENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRS 228
Query: 351 RGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
RGFGFVT S+ EVN A+ +DG + GR +RV+ A RP R
Sbjct: 229 RGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 271
Score = 76.3 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 411 MDGAAIEGRNLRVNMAGERPSSRSD 485
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289
Score = 156 bits (394), Expect = 1e-37
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 16/173 (9%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRN 176
G+V+MVEVIYDK +GRSRGFGFVTMSSV + A ++ +G + GR LRVN P R
Sbjct: 115 GNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174
Query: 177 RGDAPTPRAP------------RMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEAR 320
G + PR+ + N+++VGNL+WGVDD L LFSE GKV+EAR
Sbjct: 175 DGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEAR 234
Query: 321 VVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
V+ DR++GRS+GFGFVT + EV A+ +DGA ++GR +RV+ A RP R
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +3
Query: 201 APRMDQNNSN--KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTM 374
AP +Q+ S KLFVGNL + VD L LF G V V+ D+ TGRSRGFGFVTM
Sbjct: 80 APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139
Query: 375 STEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDFF 491
S+ +EV A + +G ++GR LRVN AG P R D F
Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKREDGF 177
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279
Score = 154 bits (389), Expect = 4e-37
Identities = 85/174 (48%), Positives = 109/174 (62%), Gaps = 15/174 (8%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ +G + GR LRVN G
Sbjct: 109 RAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-----SG 163
Query: 183 DAPTPRAPRMDQNNS---------------NKLFVGNLAWGVDDGMLHDLFSEHGKVLEA 317
P R + NS N+++VGNLAWGVD L LFSE GKV++A
Sbjct: 164 PPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDA 223
Query: 318 RVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +RV+ A RP R
Sbjct: 224 KVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 277
Score = 76.3 bits (186), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 411 MDGAAIEGRNLRVNMAGERPSSRSD 485
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291
Score = 148 bits (374), Expect = 2e-35
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 28/184 (15%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V+MVEVIYDK +GRSRGFGFVTMS+ E+ A ++ +G + GR +RVN G
Sbjct: 109 RAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-----AG 163
Query: 183 DAPTPRAPRM----------------------------DQNNSNKLFVGNLAWGVDDGML 278
AP R ++SN+++VGNL+WGVDD L
Sbjct: 164 PAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLAL 223
Query: 279 HDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMA 458
+LFSE G V++A+VV DR++GRSRGFGFVT S+ EVN A++ ++G ++GR++RV+ A
Sbjct: 224 KELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAA 283
Query: 459 GERP 470
ERP
Sbjct: 284 EERP 287
Score = 80.9 bits (198), Expect = 5e-15
Identities = 47/101 (46%), Positives = 59/101 (58%)
Frame = +3
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
D PR ++ KLFVGNL + VD L LF G V V+ D+ TGRSRGFG
Sbjct: 74 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 485
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 171
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292
Score = 147 bits (371), Expect = 5e-35
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 28/184 (15%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V++VEVIYDK SGRSRGFGFVTMS+ E+ A ++ +G + GR +RVN G
Sbjct: 110 RAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-----AG 164
Query: 183 DAPTPRAPRM----------------------------DQNNSNKLFVGNLAWGVDDGML 278
AP R ++SN+++VGNL+WGVDD L
Sbjct: 165 PAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLAL 224
Query: 279 HDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMA 458
+LFSE G V++A+VV DR++GRSRGFGFVT S+ EVN A++ ++G ++GR++RV+ A
Sbjct: 225 KELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAA 284
Query: 459 GERP 470
ERP
Sbjct: 285 EERP 288
Score = 79.0 bits (193), Expect = 2e-14
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = +3
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
D PR ++ KLFVGNL + VD L LF G V V+ D+ +GRSRGFG
Sbjct: 75 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 485
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 172
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 324
Score = 131 bits (330), Expect = 3e-30
Identities = 66/161 (40%), Positives = 101/161 (62%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V VE++YD+ + RSRGF FVTM SVE+ AI DG+ GRT++VNFP RG
Sbjct: 136 EAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRG 195
Query: 183 DAPTPRAPRMDQ------NNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETG 344
+ ++ ++ +KL+V NL+W + L D F++ + A+V+ DR +G
Sbjct: 196 GEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSG 255
Query: 345 RSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGER 467
RSRGFGF+T S+ +N AL+ M+ +EGR LR+N+AG++
Sbjct: 256 RSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296
Score = 67.8 bits (164), Expect = 5e-11
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
+L+VGNL + + L ++F+E G V +V DR T RSRGF FVTM + E +A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 411 MDGAAIEGRNLRVN 452
DG+ + GR ++VN
Sbjct: 175 FDGSQVGGRTVKVN 188
Score = 58.5 bits (140), Expect = 3e-08
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 27 EVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTP--- 197
+VIYD+ SGRSRGFGF+T SS E N+A++ ++ + GR LR+N + + P
Sbjct: 247 KVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPPVVE 306
Query: 198 RAPRMDQNNSNKL 236
+P D +NS L
Sbjct: 307 TSPENDSDNSELL 319
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950021|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_I19, 5'
(654 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 186 1e-45
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 179 1e-43
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 172 2e-41
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 172 2e-41
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 172 2e-41
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 172 2e-41
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 171 3e-41
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 171 4e-41
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 170 8e-41
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido... 168 2e-40
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 168 3e-40
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia... 167 5e-40
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 166 9e-40
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 165 3e-39
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 163 7e-39
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 163 7e-39
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 163 1e-38
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb... 162 1e-38
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c... 161 4e-38
tr|B4G1V3|B4G1V3_MAIZE Putative uncharacterized protein OS=Zea m... 160 6e-38
tr|Q0Q6S3|Q0Q6S3_LILLO GRSF OS=Lilium longiflorum GN=GRSF PE=2 SV=1 160 8e-38
tr|Q8SMH8|Q8SMH8_PERAE RNA-binding protein OS=Persea americana G... 158 2e-37
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1 158 2e-37
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1 157 5e-37
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic... 157 7e-37
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea... 157 7e-37
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea... 157 7e-37
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs... 156 9e-37
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza... 156 9e-37
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul... 156 9e-37
>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192
Score = 186 bits (471), Expect = 1e-45
Identities = 94/167 (56%), Positives = 125/167 (74%), Gaps = 10/167 (5%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN------ 170
GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+LDG D GR L+V+FP
Sbjct: 24 GSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIERLDGHDVGGRPLKVSFPQSKQNRP 83
Query: 171 ---RNRGDAPTPRAPR-MDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRE 338
R G + RAPR +++ NK+FVGNL+WGVD+G L +LFS++GKV++ARVV DRE
Sbjct: 84 SFPRGEGYQRSERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRE 143
Query: 339 TGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
+GRSRGFGFVT S +EV+ A++ +DGA +GR LRVN+AG +P+S+
Sbjct: 144 SGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRVNLAGNKPASK 190
Score = 68.9 bits (167), Expect = 3e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
KL++GNL W D L + E G V V+ D+E+GRSRGF FVTM+T+ + + +
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 411 MDGAAIEGRNLRVN 452
+DG + GR L+V+
Sbjct: 61 LDGHDVGGRPLKVS 74
>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
Length = 224
Score = 179 bits (454), Expect = 1e-43
Identities = 86/157 (54%), Positives = 114/157 (72%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDA 188
G+VD+VEVIYDK SGRSRGF FVTM++ ED I LDG D GR L+VN+P + D
Sbjct: 68 GTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQK-DK 126
Query: 189 PTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFV 368
P ++++NKLFVGNL+WG D+ L+ FSE+G V++A+VV DR++GRSRGFGFV
Sbjct: 127 PRVERSERPRDDANKLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFV 186
Query: 369 TMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
TM + A N A+ +DGA ++GR LRVN+AGE+P +R
Sbjct: 187 TMESAAAANAAIENLDGAELDGRRLRVNLAGEKPPTR 223
Score = 73.9 bits (180), Expect = 8e-12
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +3
Query: 213 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 392
++ KL+VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM+T +
Sbjct: 39 EEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDA 98
Query: 393 NQALNKMDGAAIEGRNLRVNMAGERPSSRSD 485
+N +DG + GR L+VN P S+ D
Sbjct: 99 QAVINALDGTDMGGRPLKVNY----PQSQKD 125
>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 205
Score = 172 bits (436), Expect = 2e-41
Identities = 86/159 (54%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ AIE+ +G + GR LRVN
Sbjct: 43 QAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPR 102
Query: 183 DAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSR 353
D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSR
Sbjct: 103 DDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSR 162
Query: 354 GFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
GFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 163 GFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 411 MDGAAIEGRNLRVNMAGERPSSRSDF 488
+G +GR LRVN P R DF
Sbjct: 82 FNGYTFQGRPLRVNSG--PPPPRDDF 105
>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
japonica GN=P0519E12.113 PE=4 SV=1
Length = 264
Score = 172 bits (435), Expect = 2e-41
Identities = 85/159 (53%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+ +G + GR LRVN
Sbjct: 102 QAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPR 161
Query: 183 DAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSR 353
D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSR
Sbjct: 162 DDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSR 221
Query: 354 GFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
GFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 222 GFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 411 MDGAAIEGRNLRVNMAGERPSSRSDF 488
+G +GR LRVN P R DF
Sbjct: 141 FNGYTFQGRPLRVNSG--PPPPRDDF 164
>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
Length = 213
Score = 172 bits (435), Expect = 2e-41
Identities = 84/164 (51%), Positives = 111/164 (67%), Gaps = 7/164 (4%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNR--- 179
G+VD+VEVIYDK SGRSRGF FVTM+S +D I LDG+D GR L+VNFP +
Sbjct: 47 GTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKP 106
Query: 180 ----GDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGR 347
+A P A R +++ NKLFVGN+ WG D+ + LFS +G V++A++V DR++GR
Sbjct: 107 RFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGR 166
Query: 348 SRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
SRGFGFVTM + A+ +DG ++GR LRVN AGE+P SR
Sbjct: 167 SRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNFAGEKPPSR 210
Score = 74.7 bits (182), Expect = 5e-12
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +3
Query: 201 APRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 380
AP ++ +K++VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM++
Sbjct: 14 APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73
Query: 381 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 485
+ +N +DG+ + GR L+VN P S+ D
Sbjct: 74 HDDAQALINALDGSDMGGRALKVNF----PQSQKD 104
>tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26976 PE=4 SV=1
Length = 259
Score = 172 bits (435), Expect = 2e-41
Identities = 85/159 (53%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+ +G + GR LRVN
Sbjct: 97 QAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPR 156
Query: 183 DAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSR 353
D PR+PR +N SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSR
Sbjct: 157 DDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSR 216
Query: 354 GFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
GFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 217 GFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 255
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135
Query: 411 MDGAAIEGRNLRVNMAGERPSSRSDF 488
+G +GR LRVN P R DF
Sbjct: 136 FNGYTFQGRPLRVNSG--PPPPRDDF 159
>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299
Score = 171 bits (434), Expect = 3e-41
Identities = 84/162 (51%), Positives = 117/162 (72%), Gaps = 6/162 (3%)
Frame = +3
Query: 9 GSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDA 188
G V MVEVIYD+++GRSRGF FVTM++ D + A+EK +G +Y GRTLRVN D+
Sbjct: 137 GDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEKFNGYEYQGRTLRVNSGPPPPKDS 196
Query: 189 PTPRA------PRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRS 350
PR P + N++N++FVGNL WG DD L LFS+HGKV+EA+VV DRETGRS
Sbjct: 197 FAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRS 256
Query: 351 RGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 476
RGFGFVT+S+ E+ +A++ +DG+ ++GR ++V +A +P+S
Sbjct: 257 RGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAETKPAS 298
Score = 85.1 bits (209), Expect = 3e-15
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
K+FVGNL W VD L +LF + G V V+ DR+TGRSRGF FVTM+T+A+ ++A+ K
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 411 MDGAAIEGRNLRVNMAGERP 470
+G +GR LRVN P
Sbjct: 174 FNGYEYQGRTLRVNSGPPPP 193
>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34983 PE=4 SV=1
Length = 194
Score = 171 bits (433), Expect = 4e-41
Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 17/172 (9%)
Frame = +3
Query: 6 VGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFP------ 167
+ SV+ V+V+YD++SGRSRGF FVTMS+ E + I++LDG+D+ GR L+V+FP
Sbjct: 23 ISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDRLDGSDFGGRPLKVSFPQPRENR 82
Query: 168 -------NRNRGDAPTPRAPRMDQN----NSNKLFVGNLAWGVDDGMLHDLFSEHGKVLE 314
N RGD + R PR + N+NK+F+GNL+W D L +FSE+G V++
Sbjct: 83 DNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVD 142
Query: 315 ARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
A+VV DR+TG+SRGFGFVTMS +EV+ A+ +DGA EGR +RV+ AGERP
Sbjct: 143 AKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEFEGREMRVSEAGERP 194
Score = 65.1 bits (157), Expect = 4e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
KL+VGNL W D L ++ + V VV D+++GRSRGF FVTMST +++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 411 MDGAAIEGRNLRVNMAGER 467
+DG+ GR L+V+ R
Sbjct: 61 LDGSDFGGRPLKVSFPQPR 79
>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 264
Score = 170 bits (430), Expect = 8e-41
Identities = 87/159 (54%), Positives = 120/159 (75%), Gaps = 3/159 (1%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF---PNR 173
+ GSV+MVEVIYDK +GRSRGFGFVTMSSVE+ A+++ +G GR+LRVN P R
Sbjct: 105 QAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPR 164
Query: 174 NRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSR 353
+R +P+P+ PR D +N+++VGNL+WGVD+ L +LFSE G+VLEAR++ DRE+GRSR
Sbjct: 165 DRS-SPSPQRPRGD---ANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSR 220
Query: 354 GFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 470
GFGFVT + EV A++ +DGA ++GR +RV +A +P
Sbjct: 221 GFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKP 259
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +3
Query: 231 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 410
++FVGNL + VD L LF + G V V+ D+ TGRSRGFGFVTMS+ EV A+++
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143
Query: 411 MDGAAIEGRNLRVNMAGERPSSRS 482
+G ++GR+LRVN P RS
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRS 167
>tr|Q39209|Q39209_ARATH RNA binding protein (Fragment)
OS=Arabidopsis thaliana GN=rnp-D PE=2 SV=1
Length = 310
Score = 168 bits (426), Expect = 2e-40
Identities = 90/159 (56%), Positives = 118/159 (74%)
Frame = +3
Query: 3 KVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRG 182
+ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+EK + D GR L VN RG
Sbjct: 153 QAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRG 211
Query: 183 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 362
P RAPR+ + + +++VGNL W VD+G L LFSEHGKV+EARVV DRETGRSRGFG
Sbjct: 212 SRPE-RAPRVYEP-AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFG 269
Query: 363 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 479
FVTMS E+N+A++ +DG +EGR +RVN+A ERP R
Sbjct: 270 FVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRR 308
Score = 72.0 bits (175), Expect = 3e-11
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +3
Query: 63 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 224
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 70 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 129
Query: 225 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 404
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 130 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 189
Query: 405 NKMDGAAIEGRNLRVNMAGERPS 473
K + + GR L VN A R S
Sbjct: 190 EKFNRYDLNGRLLTVNKAAPRGS 212
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