DK950044 [AcEST]

DK950044
Clone id	TST38A01NGRL0007_J19
Library	TST38
Length	739
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_J19. 5' end sequence.
Accession	DK950044
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1711Contig1
Sequence	AGCGCGCGCGCGCACACACTCCCTCCCTCTCACTCGCGCGCGCGAGCGCGCATGTCTACA TCTCACATACAGTCACGTTTCATAGAGATTTTGCTACCTTCCTCACGTGTGACATATCCA GCGTCTTTCTGTGCAGGGCAATTCTCTACTTCATGAGGACGTCGTCTTGTAGCTAAGAAC CTTCTCTAAGCGTCTCTTGTTTCATGGCTGCTGCTTCTCACTTCATTGCGTCCGCCAATT GTCGGGAGAGATGCTTTGGAACCAAAGATATAGTTGCTTCCTGCAGCAGCAGAAGGCAAT TCAAACGAAGCTGGCCTTGCCGAAGACAATTCAAGGTGAGAGCAGATTCTCAGCTATGGT CTAAGGGATGTAAAACTCATCATTGTTTACAAAAAGCTAGGCCGCGGAAGATGGATGTAT ACACAGCAGGTAGCATATCTGACAGGCTGATTACTTATGCAAATGCAAATAAGAGGCAGG CAATTGCGAGTGGAGGGTTCCAGGATGTAACAGAACACGTTGACGATCTGCATATAGCCT CATATGAAATTGATCCAGATTTTGTCTTTGGTAGAAACGAGAGGAATCTGGAGGAGCCTG GCCTTACCAAGGAGCCTTGCGCACATGAAGAAACATCCCTTACAGGAGCGCGGACTAGAA GAGAGCTTCTGACAGGAACTCTGCTGTCCGGCTTAGCAATGACAGTTTCCTTTTCAACAA GAAAAACGCTTGCGGCAGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950044\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_J19, 5' (739 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q0EXG4
Definition	tr\|Q0EXG4\|Q0EXG4_9PROT Mechanosensitive ion channel family protein OS=Mariprofundus ferrooxydans PV-1
Align length	89
Score (bit)	35.0
E-value	5.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950044\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_J19, 5' (739 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q0EXG4\|Q0EXG4_9PROT Mechanosensitive ion channel family prote... 35 5.2 >tr\|Q0EXG4\|Q0EXG4_9PROT Mechanosensitive ion channel family protein OS=Mariprofundus ferrooxydans PV-1 GN=SPV1_13177 PE=4 SV=1 Length = 381 Score = 35.0 bits (79), Expect = 5.2 Identities = 22/89 (24%), Positives = 42/89 (47%) Frame = +1 Query: 382 IVYKKLGRGRWMYTQQVAYLTGLLMQMQIRGRQLRVEGSRMQNTLTICI*PHMKLIQI 561 I+ K +GR W++ +A G L++++ R++ + I I Sbjct: 76 ILLKVIGRTSWLFIFILALFIGSLVVELPETARRV-------------------LDSITI 116 Query: 562 LSLVETRGIWRSLALPRSLAHMKKHPLQE 648 +SL+ G+W SLAL +S+ ++H + E Sbjct: 117 ISLLIQAGLWASLALQQSIDQYREHKISE 145