DK950075
Clone id TST38A01NGRL0007_L04
Library
Length 687
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_L04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TGCAGCGTCCAGGTGAAGAAAAATGTCATCCTTGTCTGGTTCTCCTTCAGCAGCTTTAGA
AGCTTCACGTCGTGTGAAATCACATGGTGCCAGAGTTAAAAGACCGGTTGGACTCGAGAG
AAGAGACACAACACAAGCTTCACCAATTGTCAGATCCGCTTTGACAACATGTAACATCGC
TTTGGCAGCTAGATGCTCCGCGGAGCAGCAGACTATCCAGAATCCAGTCTCAACGAAAAG
TCCTACCCAAGCACGGCAAAAGGAGAATCTTCCAAAGCTGGATGACAGTGGACCTGGAGG
TGGACCTGGGCGCGGTGATGATGGCGGCGGAGGCGGAGGCGGAGGTGGTGGAGGCTGGGC
AGGTGGTTTTGCTCTCTGGGGATTTCTTTTGCTACTCTCTTTCATAAAAGAGAAGGAGAA
AGACAAACCCTACAGGCGAGATGCCTTCACCAAGAGCAGGGTGAAGAAAATGCGTGAAGC
TTATTTGTAGCAGTGCACAACATTGTGTTTAAATGATTGTGAGATGTGGTTGGTGTAAGT
TGTCCTCCCGTGGCCTTGTGTGTGCGATGAGTGCTGTAGATAGTGCTCATTAGCAATATA
GCCTCCACTTGTTCTCGCCCTCCATCCAACTGAACGTTGTGATGATTTCATAAAAAGTGA
GGCATACTAATCAGTTCAATCGACCTA
■■Homology search results ■■ -
sp_hit_id P51617
Definition sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens
Align length 45
Score (bit) 30.4
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950075|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_L04, 5'
(687 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1... 30 9.2
sp|Q9W349|LOZEN_DROME Protein lozenge OS=Drosophila melanogaster... 30 9.3

>sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1
OS=Homo sapiens GN=IRAK1 PE=1 SV=2
Length = 712

Score = 30.4 bits (67), Expect = 9.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2

Query: 56 LEASRRVKSHGARVKRPVGLERRDTTQASPIVRSALTTCNIALAA 190
L R VK+HGAR K L + +A +RS +T LAA
Sbjct: 418 LAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAA 462


>sp|Q9W349|LOZEN_DROME Protein lozenge OS=Drosophila melanogaster
GN=lz PE=2 SV=2
Length = 826

Score = 30.4 bits (67), Expect = 9.3
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = -1

Query: 663 ASLFMKSSQRSVGWRARTSGGYIANEHYLQHSSHTQGHGRTTYTNH------ISQSFKHN 502
A + SS SVG + T G H HS HT GH +T +N+ S S +N
Sbjct: 205 AEVLAVSSSASVGSSSPTGGASNGTAHS-GHSGHTGGHSSSTASNNNNNGASNSNSNNNN 263

Query: 501 VVH 493
VH
Sbjct: 264 AVH 266


tr_hit_id A7Q9D6
Definition tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera
Align length 124
Score (bit) 38.9
E-value 0.31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950075|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_L04, 5'
(687 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genom... 39 0.31
tr|B7FM91|B7FM91_MEDTR Putative uncharacterized protein OS=Medic... 36 2.6
tr|B6SKR8|B6SKR8_MAIZE Putative uncharacterized protein OS=Zea m... 36 2.6
tr|A8H7V6|A8H7V6_SHEPA TonB family protein OS=Shewanella pealean... 35 5.9
tr|A4HIG6|A4HIG6_LEIBR Zinc-finger protein, conserved OS=Leishma... 35 5.9

>tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033432001
PE=4 SV=1
Length = 170

Score = 38.9 bits (89), Expect = 0.31
Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Frame = +2

Query: 86 GARVKRPVGLERRDT----TQASPIVR--SALTTCNIALAARCSAEQ-QTIQNPVSTKSP 244
G + PV L R+ TQA R SA C AL ARC AEQ QT+ ST +
Sbjct: 44 GTQAISPVVLYRQSLSFGRTQAIAHTRKQSASLICASALNARCGAEQTQTVTRESSTITI 103

Query: 245 TQARQKENLPKLDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFIKEKEKD 424
+ KE P+LDD F+K+KE +
Sbjct: 104 APTQGKEKSPELDDGGTGFPPRDDGDGGGGGGGGGGGWAGGFFFFGFLAFLGFLKDKESE 163

Query: 425 KPYR 436
PYR
Sbjct: 164 GPYR 167


>tr|B7FM91|B7FM91_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 163

Score = 35.8 bits (81), Expect = 2.6
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2

Query: 104 PVGLERRDTTQASPIVRSALTTCNIALAARCSAEQ-QTIQNPVSTKSPTQARQKENLPKL 280
P+G R +TQA+ I+ C AL ARCSAEQ QT+ T T KE P++
Sbjct: 52 PLGRGTRRSTQAATII------CAAALNARCSAEQTQTVLREAPT--ITHLPGKEKSPQI 103

Query: 281 DD 286
DD
Sbjct: 104 DD 105


>tr|B6SKR8|B6SKR8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 145

Score = 35.8 bits (81), Expect = 2.6
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2

Query: 152 RSALTTCNIALAARCSAEQ-QTI--QNPVSTKSPTQARQKENLPKLDD 286
+ ++ CN AL A+CS Q QT+ ++P T++PT ++K PKLDD
Sbjct: 50 KRSVFACNAALNAKCSQGQTQTVTRESPTITQAPTHGKEKS--PKLDD 95


>tr|A8H7V6|A8H7V6_SHEPA TonB family protein OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=Spea_3328 PE=4 SV=1
Length = 252

Score = 34.7 bits (78), Expect = 5.9
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +2

Query: 26 SSLSGSPSAALEASRRVKSHGARVKRPVGLERRDTTQASPIVRSALTTCNIALAARCSAE 205
SS + S S A++AS+ VK+ +V+ PV + + TTQA+P+ A T A+ +A
Sbjct: 40 SSQAVSISIAMQASQAVKTP-EQVQAPVETQAKPTTQANPV---AQTIAKPQPIAKTNAI 95

Query: 206 QQTIQNPVSTKSPTQARQ---KENLPKLD 283
QT P+S K + KE KLD
Sbjct: 96 AQTQAKPLSPKMAVTDKPKTLKEVAKKLD 124


>tr|A4HIG6|A4HIG6_LEIBR Zinc-finger protein, conserved OS=Leishmania
braziliensis GN=LbrM30_V2.2290 PE=4 SV=1
Length = 1177

Score = 34.7 bits (78), Expect = 5.9
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -2

Query: 674 LISMPHFL*NHHNVQLDGGREQV-EAILLMSTIYS----THRTHKATGGQ--LTPTTSHN 516
++ P + HNV RE V ++++++S I T +H A G Q TP +
Sbjct: 398 ILHPPSLTESGHNVGAVRRRESVGDSLVIVSPITPLGAVTAMSHHALGSQEGTTPALAQK 457

Query: 515 HLNTMLCTATNKLHA-FSSPCS 453
H+ CT + LH+ S PCS
Sbjct: 458 HVRAATCTVSESLHSNLSDPCS 479