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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950109
Clone id TST38A01NGRL0007_M14
Library
Length 694
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_M14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCAGCTGCTCCAGAGCTGCGGTCATGAAAGCCCTCCTCCTCCCTCGCCAGTAGGCGTGA
AGTATGACATGGGAGCTCCGCAGCGTGTCGTTGTTGGCTTTGATGTTAGTGGCGAAGCGA
ACAACACTAAGCCTCACTTCGACCCTTGTGAGAGCCCTAGGTCTGTGTTGGAATCGGATG
CATTGAGTGATGATGATGATCATCATCTTCGTAGTTCTCCCCCGGCCCCGACCCCAGCTC
CATCTCCACGCTCTGTTCTTGATAGGTTGTTATCAGGACCGGATTCTCGACCTGCTTACA
CAGAAGGGGTTGGTCTAGGCATTGTTGCGGCCATCAGCCGAGATGAGCCGGCTGTGGCGG
GTAAGGTGGTACTTGACAATTCTGTGGGGGGCAACCCTATTAGAGCTATCTCAGAGGAGA
GTAGCGGAGGCTACCCTCAAAAGGGAGTTTTCAAAGGGTCTCCTACTTTCTGGAGAGGTG
CCGATTCTAGTGGTTATGAAGAGGACCACGATGACGATCATCAGGAATCTATTTTCTGTG
CAGCTTCTCCTTTCGCCCACTGCTGCAGCCTTGGATTGCAGATGGGAGACTTCTTAAGTG
CTTGCTTCTTTTGCAAGTGCCGGCTAATGCCTGGGAAGGATATCTACATGTACAGAGGTG
ATAGAGCTTTCTGTTCCACGGAATGCCGTTACCA
■■Homology search results ■■ -
sp_hit_id P80073
Definition sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella patens
Align length 57
Score (bit) 35.0
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950109|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_M14, 5'
         (694 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella p...    35   0.38 
sp|Q8C8Y5|SAMD7_MOUSE Sterile alpha motif domain-containing prot...    32   2.5  
sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles g...    32   3.3  
sp|P83919|TX13_CUPSA Neurotoxic enhancer CSTX-13 (Fragments) OS=...    32   4.2  
sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine ...    31   5.5  
sp|P36829|VE7_HPV40 Protein E7 OS=Human papillomavirus type 40 G...    30   9.4  
sp|Q89893|DR2_HHV6U Uncharacterized protein DR2 OS=Human herpesv...    30   9.5  

>sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella
           patens GN=PP2 PE=2 SV=1
          Length = 421

 Score = 35.0 bits (79), Expect = 0.38
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 303 LCKQVENPVLITTYQEQSVEMELGSGPGENYEDDDHHHHSMHPIPTQT*GSHKGRSE 133
           +C+  E PVL+   +     + +  GPG NY+DD   H S   + T++   H+  S+
Sbjct: 189 MCQSDEGPVLLKVPKAPKSPISVNPGPGCNYDDDS-EHSSSSTVTTKSHEDHRDSSD 244


>sp|Q8C8Y5|SAMD7_MOUSE Sterile alpha motif domain-containing protein
           7 OS=Mus musculus GN=Samd7 PE=2 SV=3
          Length = 441

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430 PPLLSSEIALIGLPPTELSSTTLPATAGSSRLMAATMPRPTPS 302
           PP++  ++    + PT+ S   +P+  GSS L  A MP P  S
Sbjct: 24  PPIVDRDVLSSSIAPTDPSQFCVPSQFGSSGLPNANMPNPLSS 66


>sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles
           gambiae GN=nkd PE=2 SV=1
          Length = 886

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
 Frame = -2

Query: 279 VLITTYQEQSVEME----LGSGPGE---NYEDDDHHHHS--MHPIPTQT*GSHKGRSEA* 127
           +L+T+ +EQ ++++     GSG G+   +++   HHHH    H  P+    +H G S   
Sbjct: 49  LLLTSDREQMLKVKSSASTGSGTGQTKTSFQHSHHHHHHGHHHQSPSSNGHNHSGTS--- 105

Query: 126 CCSLRH*HQSQQRH 85
                H  Q QQ+H
Sbjct: 106 -----HQQQQQQQH 114


>sp|P83919|TX13_CUPSA Neurotoxic enhancer CSTX-13 (Fragments)
           OS=Cupiennius salei PE=1 SV=2
          Length = 63

 Score = 31.6 bits (70), Expect = 4.2
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = -2

Query: 657 LCTCRYPSQALAG--TCKRSKHLRSLPSAIQ 571
           +CTC YPSQA     TC++ KHL+ +   +Q
Sbjct: 26  VCTCFYPSQAKKELCTCQQPKHLKYIEKGLQ 56


>sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine
           synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=2 SV=2
          Length = 1343

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 28/108 (25%)
 Frame = +3

Query: 291 PAYTEGVGLGIV---------------AAISRDEPAVAGKV-----VLDNSVGGNPIRAI 410
           P Y  GVG G                 AA+ R +  + GK+          +GGNP+ AI
Sbjct: 447 PVYRIGVGGGAASSVSVQGNRENQLDFAAVQRGDAEMGGKLHRVVRACAERIGGNPLMAI 506

Query: 411 SEESSGGYPQK--------GVFKGSPTFWRGADSSGYEEDHDDDHQES 530
            ++ +GG            GV   S TF  G +S    E    ++QE+
Sbjct: 507 HDQGAGGNGNVIKELVEGCGVTVKSDTFQLGDESISLRELWTAEYQEN 554


>sp|P36829|VE7_HPV40 Protein E7 OS=Human papillomavirus type 40
           GN=E7 PE=3 SV=1
          Length = 111

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 483 DSSGYEEDHDDDHQESIFC--AASPFAHCCSLGLQMGDFLSACFFCKC 620
           DSS  E+DH+ D  +S+       P      + LQ    ++ C FC+C
Sbjct: 29  DSSDSEDDHEQDQLDSLHSREREQPTQQDLQVNLQSFKVVTRCVFCQC 76


>sp|Q89893|DR2_HHV6U Uncharacterized protein DR2 OS=Human
           herpesvirus 6A (strain Uganda-1102) GN=DR2L PE=3 SV=1
          Length = 620

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 26/86 (30%), Positives = 36/86 (41%)
 Frame = -2

Query: 261 QEQSVEMELGSGPGENYEDDDHHHHSMHPIPTQT*GSHKGRSEA*CCSLRH*HQSQQRHA 82
           QE S + + G G G  + DD  H H+      Q  G H+ R +    S RH H  + + A
Sbjct: 351 QESSDDHQRG-GSGRGHRDDGAHRHANDKTEPQQRGEHEERKQT--DSGRHEHAQESQVA 407

Query: 81  AELPCHTSRLLAREEEGFHDRSSGAA 4
                   R     E+G  +RS G A
Sbjct: 408 -------RRDEEETEQGDSERSCGGA 426
tr_hit_id A9NT09
Definition tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 34
Score (bit) 63.2
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950109|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_M14, 5'
         (694 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea...    63   2e-08
tr|A7Q8E6|A7Q8E6_VITVI Chromosome chr5 scaffold_64, whole genome...    63   2e-08
tr|A9NXA1|A9NXA1_PICSI Putative uncharacterized protein OS=Picea...    62   5e-08
tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea...    61   6e-08
tr|A9PIQ4|A9PIQ4_POPJC Putative uncharacterized protein OS=Popul...    61   8e-08
tr|A9P975|A9P975_POPTR Putative uncharacterized protein OS=Popul...    61   8e-08
tr|A9PJY7|A9PJY7_POPJC Putative uncharacterized protein OS=Popul...    60   2e-07
tr|Q9FH22|Q9FH22_ARATH Gb|AAF17687.1 OS=Arabidopsis thaliana GN=...    59   2e-07
tr|A2Z1K2|A2Z1K2_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|Q69PH9|Q69PH9_ORYSJ Os09g0433800 protein OS=Oryza sativa subs...    59   4e-07
tr|Q69L67|Q69L67_ORYSJ Os02g0592800 protein OS=Oryza sativa subs...    59   4e-07
tr|B8AEQ4|B8AEQ4_ORYSI Putative uncharacterized protein OS=Oryza...    59   4e-07
tr|A7R1E8|A7R1E8_VITVI Chromosome undetermined scaffold_349, who...    59   4e-07
tr|A3BZ50|A3BZ50_ORYSJ Putative uncharacterized protein OS=Oryza...    59   4e-07
tr|A3A8K3|A3A8K3_ORYSJ Putative uncharacterized protein OS=Oryza...    59   4e-07
tr|Q9SGZ8|Q9SGZ8_ARATH F28K19.24 (Putative uncharacterized prote...    58   7e-07
tr|B8LPG4|B8LPG4_PICSI Putative uncharacterized protein OS=Picea...    57   1e-06
tr|B6U2Z5|B6U2Z5_MAIZE Putative uncharacterized protein OS=Zea m...    57   1e-06
tr|B6SU44|B6SU44_MAIZE Putative uncharacterized protein OS=Zea m...    57   1e-06
tr|Q8VY80|Q8VY80_ARATH Putative uncharacterized protein At1g2216...    57   1e-06
tr|Q6H502|Q6H502_ORYSJ Os02g0174800 protein OS=Oryza sativa subs...    56   2e-06
tr|A7PDT1|A7PDT1_VITVI Chromosome chr11 scaffold_13, whole genom...    56   2e-06
tr|A7P5I5|A7P5I5_VITVI Chromosome chr4 scaffold_6, whole genome ...    56   2e-06
tr|A7NV17|A7NV17_VITVI Chromosome chr18 scaffold_1, whole genome...    56   2e-06
tr|A5AP27|A5AP27_VITVI Putative uncharacterized protein OS=Vitis...    56   2e-06
tr|A2XHS3|A2XHS3_ORYSI Putative uncharacterized protein OS=Oryza...    56   2e-06
tr|A2X1H1|A2X1H1_ORYSI Putative uncharacterized protein OS=Oryza...    56   2e-06
tr|Q8L9M2|Q8L9M2_ARATH Putative uncharacterized protein OS=Arabi...    56   2e-06
tr|B6SQ10|B6SQ10_MAIZE Putative uncharacterized protein OS=Zea m...    56   2e-06
tr|B6U0I2|B6U0I2_MAIZE Putative uncharacterized protein OS=Zea m...    55   3e-06

>tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 591 FLSACFFCKCRLMPGKDIYMYRGDRAFCSTECRY 692
           FL ACF CK RL+PG+DIYMYRGD AFCS ECR+
Sbjct: 90  FLHACFLCKRRLVPGRDIYMYRGDSAFCSIECRH 123


>tr|A7Q8E6|A7Q8E6_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033025001
           PE=4 SV=1
          Length = 143

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +3

Query: 591 FLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           FL  CF CK +L+PGKDIYMY+GDRAFCS ECR
Sbjct: 54  FLDECFLCKQKLLPGKDIYMYKGDRAFCSVECR 86


>tr|A9NXA1|A9NXA1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 124

 Score = 61.6 bits (148), Expect = 5e-08
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = +3

Query: 588 DFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           DFL AC+ CK  L PG+DIYMYRGD+AFCS ECR
Sbjct: 43  DFLDACYLCKKSLGPGRDIYMYRGDKAFCSVECR 76


>tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 591 FLSACFFCKCRLMPGKDIYMYRGDRAFCSTECRY 692
           FL ACF CK RL+PG+DIYMYRG+ AFCS ECR+
Sbjct: 90  FLHACFLCKRRLVPGRDIYMYRGNSAFCSIECRH 123


>tr|A9PIQ4|A9PIQ4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 143

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 591 FLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           FL  CFFC  +L+PGKDIYMY+GDR FCS ECR
Sbjct: 54  FLDQCFFCGQKLLPGKDIYMYKGDRGFCSVECR 86


>tr|A9P975|A9P975_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 157

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 27/54 (50%), Positives = 33/54 (61%)
 Frame = +3

Query: 528 SIFCAASPFAHCCSLGLQMGDFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           S   A +P     +    +  FL  CF C  +L+PGKDIYMY+GDRAFCS ECR
Sbjct: 44  SFSSATAPLPSYRNCSFPVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECR 97


>tr|A9PJY7|A9PJY7_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 148

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +3

Query: 576 LQMGDFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           L+  +FL AC  CK RL+PG+DIYMY+GD AFCS ECR
Sbjct: 71  LETPNFLRACSLCKRRLIPGRDIYMYKGDSAFCSQECR 108


>tr|Q9FH22|Q9FH22_ARATH Gb|AAF17687.1 OS=Arabidopsis thaliana
           GN=At5g49120 PE=4 SV=1
          Length = 150

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = +3

Query: 579 QMGDFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECR 689
           Q   FL  CF C+ +L+P KDIYMY+GDRAFCS ECR
Sbjct: 64  QDSGFLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECR 100


>tr|A2Z1K2|A2Z1K2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31488 PE=4 SV=1
          Length = 174

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +3

Query: 585 GDFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECRY 692
           GDFLSAC  C+  L P KD+YMYRGD+ FCS ECR+
Sbjct: 93  GDFLSACSLCRRELGPDKDVYMYRGDQGFCSEECRW 128


>tr|Q69PH9|Q69PH9_ORYSJ Os09g0433800 protein OS=Oryza sativa subsp.
           japonica GN=OJ1081_G10.16 PE=2 SV=1
          Length = 174

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +3

Query: 585 GDFLSACFFCKCRLMPGKDIYMYRGDRAFCSTECRY 692
           GDFLSAC  C+  L P KD+YMYRG++ FCS ECR+
Sbjct: 93  GDFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRW 128