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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950114
Clone id TST38A01NGRL0007_M19
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_M19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CATCCCACTCTATGGAAATGGGATGGAGGTGGGCAATGAAGCTGGTTATATTGTGGGAAT
GACGACATGCTATCCCGAGCCTGGATCTGTACAAGTCGTGAGCGGGGAAAGTATTCGAAT
GCTCTCCACTTATAGTAGGTTGATAAGCCATACTGGGGTTATGGGGCTCGGCTACATAGC
TGTTTATCCTCATTCAGAAGCAAGCATTTTATAAGGGCAAGCAAAGCCTCATTTACATAT
GGGTATTAAGTACTCGGGTAGTAAACAAGAAAAATTTATTAACACTTTTGGCGACGAGTA
TCTGAGTATTGAATAGTGGTGCTTGCTTGAACAGTGGGTAATGTGAGTATATGTACTTGT
AAGTTTCAACCTGTAAGTTTTGTGTATTGACCTGGTGATTCCCTTTTGGGGGGGAAATGT
TGGCATGGATTGTTGCTCTTGTGAGTTGTAATATTACTACCTTTGAATATGGACATTGGA
GCAAAAAGGTTGTAGAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q99126
Definition sp|Q99126|CHS3_USTMA Chitin synthase 3 OS=Ustilago maydis
Align length 59
Score (bit) 31.6
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950114|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_M19, 5'
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99126|CHS3_USTMA Chitin synthase 3 OS=Ustilago maydis GN=CHS...    32   2.1  
sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein ...    31   3.5  
sp|Q2JTZ2|SYD_SYNJA Aspartyl-tRNA synthetase OS=Synechococcus sp...    30   6.0  
sp|Q6WN34|CRDL2_HUMAN Chordin-like protein 2 OS=Homo sapiens GN=...    30   6.0  

>sp|Q99126|CHS3_USTMA Chitin synthase 3 OS=Ustilago maydis GN=CHS3
           PE=3 SV=2
          Length = 1029

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 193 MRINSYVAEPHN---PSMAYQPTISGEHSNTFPAHDLYRSRLGIACRHSHNITSFIAHL 26
           MR ++   +P +    S   +P + G H+  F A  +Y     + CR  H +   IAHL
Sbjct: 339 MRYSAVTCDPDDFASESFTLRPALYGRHTELFIAITMYNEDEVLFCRTFHGVMKNIAHL 397


>sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein 10
           OS=Dictyostelium discoideum GN=gtaJ PE=4 SV=1
          Length = 714

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 454 ILQLTRATIHANISPPKGNHQVNTQNLQVETYKYIYSHYPLFKQAP 317
           ILQL +   H N  PP+ NH +N Q  Q +   Y    +P  +Q P
Sbjct: 109 ILQLNKTMPHVN--PPQQNHIMNQQQQQQQQQHYQQQQHPHQQQHP 152


>sp|Q2JTZ2|SYD_SYNJA Aspartyl-tRNA synthetase OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=aspS PE=3 SV=1
          Length = 601

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 5   PLY-GNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           PL+ G+G +V  +A    G+    P PG  + +S   I+      +L++  G  GL +I 
Sbjct: 313 PLFQGSGFKVFAKALQEGGVIKVLPVPGGDEKISNTRIKPGGDLFKLVTQYGAGGLAFIR 372

Query: 182 VYPHS 196
           V P S
Sbjct: 373 VRPGS 377


>sp|Q6WN34|CRDL2_HUMAN Chordin-like protein 2 OS=Homo sapiens
           GN=CHRDL2 PE=1 SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -3

Query: 169 EPHNPSMAYQPTISGEHSNT-------FPAHDLYRSRLGIAC 65
           EPH PS    P  S +H+ T       F AH+L+ SRL   C
Sbjct: 97  EPHTPSGLRAPPKSCQHNGTMYQHGEIFSAHELFPSRLPNQC 138
tr_hit_id Q2PEW8
Definition tr|Q2PEW8|Q2PEW8_TRIPR Putative uncharacterized protein OS=Trifolium pratense
Align length 61
Score (bit) 87.8
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950114|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_M19, 5'
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2PEW8|Q2PEW8_TRIPR Putative uncharacterized protein OS=Trifo...    88   2e-16
tr|A7PHT3|A7PHT3_VITVI Chromosome chr17 scaffold_16, whole genom...    85   2e-15
tr|Q64EX4|Q64EX4_PEA MtN19-like protein OS=Pisum sativum PE=2 SV=1     85   2e-15
tr|A2V881|A2V881_TOBAC MtN19 like protein (Fragment) OS=Nicotian...    84   4e-15
tr|B7FLA0|B7FLA0_MEDTR Putative uncharacterized protein OS=Medic...    84   5e-15
tr|B7FM80|B7FM80_MEDTR Putative uncharacterized protein OS=Medic...    81   2e-14
tr|Q6ZD31|Q6ZD31_ORYSJ Os08g0538600 protein OS=Oryza sativa subs...    79   1e-13
tr|B8B955|B8B955_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|A2ZWA8|A2ZWA8_ORYSJ Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|B6T080|B6T080_MAIZE MtN19-like protein OS=Zea mays PE=2 SV=1        78   2e-13
tr|B6SZN0|B6SZN0_MAIZE MtN19-like protein OS=Zea mays PE=2 SV=1        78   2e-13
tr|B6SXX8|B6SXX8_MAIZE MtN19-like protein OS=Zea mays PE=2 SV=1        78   2e-13
tr|Q9FLS7|Q9FLS7_ARATH MtN19-like protein OS=Arabidopsis thalian...    73   8e-12
tr|Q8VZ21|Q8VZ21_ARATH Putative uncharacterized protein At5g6182...    73   8e-12
tr|Q8RXF7|Q8RXF7_ARATH Putative uncharacterized protein At5g6182...    73   8e-12
tr|O24097|O24097_MEDTR MtN19 protein OS=Medicago truncatula GN=M...    69   9e-11
tr|A9TKN5|A9TKN5_PHYPA Predicted protein OS=Physcomitrella paten...    52   2e-05
tr|A9T815|A9T815_PHYPA Predicted protein OS=Physcomitrella paten...    51   3e-05
tr|A9U293|A9U293_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|B8PF77|B8PF77_9APHY Predicted protein (Fragment) OS=Postia pl...    33   5.6  
tr|B6K8A8|B6K8A8_SCHJP Threonine aspartase OS=Schizosaccharomyce...    33   7.5  

>tr|Q2PEW8|Q2PEW8_TRIPR Putative uncharacterized protein
           OS=Trifolium pratense PE=2 SV=1
          Length = 404

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YGNG E GNE GYIVGM+TCYP+PGSV+++ GE++ + S Y+ +  HTGVMGL Y+ 
Sbjct: 335 IPTYGNGNEAGNEVGYIVGMSTCYPQPGSVKIIDGETLTLESNYNNIKEHTGVMGLFYLL 394

Query: 182 V 184
           V
Sbjct: 395 V 395


>tr|A7PHT3|A7PHT3_VITVI Chromosome chr17 scaffold_16, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018061001
           PE=4 SV=1
          Length = 226

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YG G E GNEAGYIVGM+TCYP+PGSV++  GE++ + S YS    HTGVMGL YI 
Sbjct: 106 IPTYGEGKEAGNEAGYIVGMSTCYPQPGSVKISDGETLILESNYSSTQKHTGVMGLFYIL 165

Query: 182 V 184
           V
Sbjct: 166 V 166


>tr|Q64EX4|Q64EX4_PEA MtN19-like protein OS=Pisum sativum PE=2 SV=1
          Length = 435

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YGNG E GNE+GYIVGM+TCYP+PGS++++ GE++ + S Y+    HTGVMGL YI 
Sbjct: 347 IPSYGNGNEAGNESGYIVGMSTCYPKPGSMKIMDGETLTLESNYNSTKEHTGVMGLFYIL 406

Query: 182 V 184
           V
Sbjct: 407 V 407


>tr|A2V881|A2V881_TOBAC MtN19 like protein (Fragment) OS=Nicotiana
           tabacum GN=RsRG3-3 PE=2 SV=1
          Length = 118

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           +P+YG G E GNEAGYIVGM++CYP PGS+++  GE++ ++S YS    HTGVMGL Y+ 
Sbjct: 16  LPIYGEGKEPGNEAGYIVGMSSCYPRPGSIKISEGETVTLISNYSSAQRHTGVMGLFYLL 75

Query: 182 V 184
           V
Sbjct: 76  V 76


>tr|B7FLA0|B7FLA0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 420

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +2

Query: 5   PLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIAV 184
           P YGN  E GNE GYIVGM+TCYP+PGS++++ GE++ + S Y+    HTGVMG  Y+ V
Sbjct: 348 PSYGNRSEAGNEVGYIVGMSTCYPKPGSIKIIDGETLTLESNYNNSQEHTGVMGFFYLLV 407

Query: 185 YPHSEAS 205
             HS  S
Sbjct: 408 AEHSTRS 414


>tr|B7FM80|B7FM80_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 430

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YGNG E  NE GYIVGM+TCYP+PGS++++ GE++ ++S Y+    H GVMGL Y+ 
Sbjct: 348 IPRYGNGNEARNETGYIVGMSTCYPKPGSIKIIDGETLTLVSIYNNSQEHNGVMGLFYLL 407

Query: 182 V 184
           V
Sbjct: 408 V 408


>tr|Q6ZD31|Q6ZD31_ORYSJ Os08g0538600 protein OS=Oryza sativa subsp.
           japonica GN=P0665C04.36 PE=2 SV=1
          Length = 424

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YG G E GNE  YIVGM+TCYP+PGSV+V  GE + ++S YS    HTGVMGL YI 
Sbjct: 334 IPSYGKGEEAGNEDNYIVGMSTCYPKPGSVKVSDGEVLTVVSNYSSDRQHTGVMGLLYIL 393

Query: 182 V 184
           V
Sbjct: 394 V 394


>tr|B8B955|B8B955_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30065 PE=4 SV=1
          Length = 424

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YG G E GNE  YIVGM+TCYP+PGSV+V  GE + ++S YS    HTGVMGL YI 
Sbjct: 334 IPSYGKGEEAGNEDNYIVGMSTCYPKPGSVKVSDGEVLTVVSNYSSDRQHTGVMGLLYIL 393

Query: 182 V 184
           V
Sbjct: 394 V 394


>tr|A2ZWA8|A2ZWA8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_002830 PE=4 SV=1
          Length = 461

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +2

Query: 2   IPLYGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIA 181
           IP YG G E GNE  YIVGM+TCYP+PGSV+V  GE + ++S YS    HTGVMGL YI 
Sbjct: 334 IPSYGKGEEAGNEDNYIVGMSTCYPKPGSVKVSDGEVLTVVSNYSSDRQHTGVMGLLYIL 393

Query: 182 V 184
           V
Sbjct: 394 V 394


>tr|B6T080|B6T080_MAIZE MtN19-like protein OS=Zea mays PE=2 SV=1
          Length = 426

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = +2

Query: 11  YGNGMEVGNEAGYIVGMTTCYPEPGSVQVVSGESIRMLSTYSRLISHTGVMGLGYIAVYP 190
           YG G E G+EAGYIVGM+TCYP PG+V V  GE + ++S YS    HTGVMGL YI V  
Sbjct: 338 YGGGREAGDEAGYIVGMSTCYPRPGAVTVRDGEPLTVVSRYSSDRRHTGVMGLFYILVAD 397

Query: 191 HS 196
           H+
Sbjct: 398 HA 399