DK950147 |
Clone id |
TST38A01NGRL0007_O05 |
Library |
TST38 |
Length |
706 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_O05. 5' end sequence. |
Accession |
DK950147 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1734Contig1 |
Sequence |
ATACGCAACACGGTTCTCTCTCTCACACACACAGCCGCATAGTACATACATTCCTTTCGC TGCGCAGTGCGCGCGAGCCGCACCAAAAGAGCGCCGCACACTCAACAAAAGCGCCCACAT CCTACAATACCTCTGCTGTGAATGATTGGTGAAGCGCCCAACGTCAGCCTTTCTCCGCAT AAAACGTGTCAGGCTCAGGAGAGAACACGTATGAGCAGGGAACAATGATGAGCAGGAACA TTCTAGCGGAGAAGGCCCTGCTTTTGGGCTCTGTAGAGCAGCGGGAGAAGTCGTCTTGGT TTCTCCAATAGCCAGCCATGGACTCTGACACAGCCAAGCAACAATTTGGTGTGGGGAGAT GAATGGCAGCAAAATTTTTTATTCTGGAGGGTGTTGCTCTTCTCCAGTTTCAGAAGAATC TACTCTGGATTGTGAAATCTCCCTTTGCACTGGTGGTCGAAACCACCAACCGATCATTGA GTGTGCACCATCACCATCATCAGCAGCACTCACAAATCAATGCTCAGAAAGTAGTGCAGC GTATTTTCTATGGCCTCCTGTTTATCGCCCTCATGGCAGCGCAGGAGAACGAGCAAATTA TTTCCAAGGTCTTCAAAAGGCTGTGGAGTTTGGATCGATTGAGAGGATCTTAAAAGGTCC GCAAGCATCAACGCTTCTGGACCTCATGACCATACGAGCATACAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54PA8 |
Definition |
sp|Q54PA8|Y2080_DICDI Uncharacterized protein DDB_G0284671 OS=Dictyostelium discoideum |
Align length |
64 |
Score (bit) |
32.7 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKZ8 |
Definition |
tr|B8LKZ8|B8LKZ8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
109 |
Score (bit) |
81.3 |
E-value |
6.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950147|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_O05, 5' (706 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKZ8|B8LKZ8_PICSI Putative uncharacterized protein OS=Picea... 81 6e-14 tr|Q6Z9X3|Q6Z9X3_ORYSJ Os08g0407200 protein OS=Oryza sativa subs... 78 5e-13 tr|A7P2T6|A7P2T6_VITVI Chromosome chr1 scaffold_5, whole genome ... 78 5e-13 tr|A5BPH0|A5BPH0_VITVI Putative uncharacterized protein OS=Vitis... 78 5e-13 tr|A2YV45|A2YV45_ORYSI Putative uncharacterized protein OS=Oryza... 78 5e-13 tr|A7PWT6|A7PWT6_VITVI Chromosome chr19 scaffold_35, whole genom... 73 2e-11 tr|A2Q289|A2Q289_MEDTR Peptidase, trypsin-like serine and cystei... 71 8e-11 tr|A2Q138|A2Q138_MEDTR Peptidase, trypsin-like serine and cystei... 71 8e-11 tr|Q93YT5|Q93YT5_ARATH Putative uncharacterized protein At2g3515... 69 2e-10 tr|Q8S8Q2|Q8S8Q2_ARATH Expressed protein (Putative uncharacteriz... 69 2e-10 tr|Q7XTS7|Q7XTS7_ORYSJ OSJNBa0008M17.6 protein (Putative unchara... 69 3e-10 tr|Q0JA58|Q0JA58_ORYSJ Os04g0614800 protein OS=Oryza sativa subs... 69 3e-10 tr|Q01K09|Q01K09_ORYSA OSIGBa0126B18.9 protein OS=Oryza sativa G... 69 3e-10 tr|B4XT64|B4XT64_ORYSJ Narrow leaf 1 OS=Oryza sativa subsp. japo... 69 3e-10 tr|A2XXI5|A2XXI5_ORYSI Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|Q9FL94|Q9FL94_ARATH Gb|AAC61821.1 OS=Arabidopsis thaliana GN=... 59 2e-07 tr|Q8L622|Q8L622_ARATH Putative uncharacterized protein At5g4503... 59 2e-07 tr|Q9LDF8|Q9LDF8_ARATH Gb|AAF35944.1 (At3g12950) OS=Arabidopsis ... 54 1e-05 tr|A9TZJ8|A9TZJ8_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 0.002 tr|A9RTD9|A9RTD9_PHYPA Predicted protein (Fragment) OS=Physcomit... 41 0.066 tr|A9RD99|A9RD99_PHYPA Predicted protein (Fragment) OS=Physcomit... 40 0.11 tr|A6TSN2|A6TSN2_ALKMQ Beta-lactamase domain protein OS=Alkaliph... 36 2.8 tr|Q89DR2|Q89DR2_BRAJA Carbamoylphosphate synthase large subunit... 35 3.6 tr|A8J0K4|A8J0K4_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 4.7 tr|Q54YG2|Q54YG2_DICDI Extracellular matrix protein ST430 OS=Dic... 35 6.2
>tr|B8LKZ8|B8LKZ8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 683
Score = 81.3 bits (199), Expect = 6e-14 Identities = 53/109 (48%), Positives = 68/109 (62%) Frame = +2
Query: 380 YSGGCCSSPVSEESTLDCEISLCTGGRNHQPIIECAPSPSSAALTNQCSESSAAYFLWPP 559 YSG S SEES LD E ++ TG P + P + A+ Q SESSAA F WPP Sbjct: 86 YSG----SMQSEESALDREQTV-TGNSGRHPRSDSPPLQAFAS-GGQHSESSAACFRWPP 139
Query: 560 VYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 R +G+A ERA YF G+QK V+ ++E + G QA+TLLDLMTIRA++ Sbjct: 140 SNRLNGTAEERAAYFGGVQKEVDSETLEHLPSGHQATTLLDLMTIRAFH 188
>tr|Q6Z9X3|Q6Z9X3_ORYSJ Os08g0407200 protein OS=Oryza sativa subsp. japonica GN=P0453D01.16-1 PE=2 SV=1 Length = 590
Score = 78.2 bits (191), Expect = 5e-13 Identities = 52/103 (50%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Frame = +2
Query: 401 SPVSEESTLDCEISLCTGGRNHQPIIECAPSP-SSAALTNQCSESSAAYFLWPPVYRPHG 577 S SE S LD E + C NH C PSP A Q SESSAAYF WP HG Sbjct: 13 SSQSEGSALDMERNGC----NHN----CCPSPLQPIASGGQHSESSAAYFSWPTSTLMHG 64
Query: 578 SAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 SA RANYF LQK V G + R+ G +A+TLLDLM IRA++ Sbjct: 65 SAEGRANYFGNLQKGVLPGHLGRLPTGQRATTLLDLMIIRAFH 107
>tr|A7P2T6|A7P2T6_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030177001 PE=4 SV=1 Length = 596
Score = 78.2 bits (191), Expect = 5e-13 Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 1/100 (1%) Frame = +2
Query: 410 SEESTLDCEISLCTGGRNHQPIIECAPSPSSA-ALTNQCSESSAAYFLWPPVYRPHGSAG 586 SEES LD E + C NH + +P P A A Q SES+AAYF WP R + +A Sbjct: 18 SEESALDLERNYC----NHPNLPSPSPPPLQAFASGGQLSESNAAYFSWPTSSRLNDAAE 73
Query: 587 ERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 74 DRANYFGNLQKGVLPETLGRLPTGQQATTLLELMTIRAFH 113
>tr|A5BPH0|A5BPH0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008456 PE=4 SV=1 Length = 1092
Score = 78.2 bits (191), Expect = 5e-13 Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 1/100 (1%) Frame = +2
Query: 410 SEESTLDCEISLCTGGRNHQPIIECAPSPSSA-ALTNQCSESSAAYFLWPPVYRPHGSAG 586 SEES LD E + C NH + +P P A A Q SES+AAYF WP R + +A Sbjct: 452 SEESALDLERNYC----NHPNLPSPSPPPLQAFASGGQLSESNAAYFSWPTSSRLNDAAE 507
Query: 587 ERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 508 DRANYFGNLQKGVLPETLGRLPTGQQATTLLELMTIRAFH 547
>tr|A2YV45|A2YV45_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29197 PE=4 SV=1 Length = 590
Score = 78.2 bits (191), Expect = 5e-13 Identities = 52/103 (50%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Frame = +2
Query: 401 SPVSEESTLDCEISLCTGGRNHQPIIECAPSP-SSAALTNQCSESSAAYFLWPPVYRPHG 577 S SE S LD E + C NH C PSP A Q SESSAAYF WP HG Sbjct: 13 SSQSEGSALDMERNGC----NHN----CCPSPLQPIASGGQHSESSAAYFSWPTSTLMHG 64
Query: 578 SAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 SA RANYF LQK V G + R+ G +A+TLLDLM IRA++ Sbjct: 65 SAEGRANYFGNLQKGVLPGHLGRLPTGQRATTLLDLMIIRAFH 107
>tr|A7PWT6|A7PWT6_VITVI Chromosome chr19 scaffold_35, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025767001 PE=4 SV=1 Length = 603
Score = 73.2 bits (178), Expect = 2e-11 Identities = 48/116 (41%), Positives = 67/116 (57%) Frame = +2
Query: 359 MNGSKIFYSGGCCSSPVSEESTLDCEISLCTGGRNHQPIIECAPSPSSAALTNQCSESSA 538 M+ +K+ C S +SEES + E + C +H P P+ A Q SES+A Sbjct: 1 MDQTKLNLRLRCSGSTLSEESAPNQERNCCC--HSHLPS-SSLPTLQPFASAGQHSESNA 57
Query: 539 AYFLWPPVYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 AYF WP R + +A ERANYF LQKAV + + KG QA++LL++MTIRA++ Sbjct: 58 AYFSWPTSSRLNDAAEERANYFSNLQKAVLSETPGPLPKGQQATSLLEVMTIRAFH 113
>tr|A2Q289|A2Q289_MEDTR Peptidase, trypsin-like serine and cysteine proteases OS=Medicago truncatula GN=MtrDRAFT_AC149576g3v2 PE=4 SV=1 Length = 597
Score = 70.9 bits (172), Expect = 8e-11 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = +2
Query: 359 MNGSKIFYSGGCCSSPVSEESTLDCEISLCTGGRNHQPIIECAP-SPSSAALTNQCSESS 535 MN +++ S S SEES LD E RN+ +P + A+ Q SE + Sbjct: 1 MNRNRLGLSAHHSGSTQSEESALDLE-------RNYYGHPSSSPLHMQTFAVGVQHSEGN 53
Query: 536 AAYFLWPPVYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 AAYF WP + R + +A +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 54 AAYFSWPTLNRWNDAAEDRANYFGNLQKGVLPETLGRLPSGQQATTLLELMTIRAFH 110
>tr|A2Q138|A2Q138_MEDTR Peptidase, trypsin-like serine and cysteine proteases (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC147481g36v2 PE=4 SV=1 Length = 546
Score = 70.9 bits (172), Expect = 8e-11 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = +2
Query: 359 MNGSKIFYSGGCCSSPVSEESTLDCEISLCTGGRNHQPIIECAP-SPSSAALTNQCSESS 535 MN +++ S S SEES LD E RN+ +P + A+ Q SE + Sbjct: 1 MNRNRLGLSAHHSGSTQSEESALDLE-------RNYYGHPSSSPLHMQTFAVGVQHSEGN 53
Query: 536 AAYFLWPPVYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 AAYF WP + R + +A +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 54 AAYFSWPTLNRWNDAAEDRANYFGNLQKGVLPETLGRLPSGQQATTLLELMTIRAFH 110
>tr|Q93YT5|Q93YT5_ARATH Putative uncharacterized protein At2g35155 OS=Arabidopsis thaliana GN=At2g35155 PE=2 SV=1 Length = 579
Score = 69.3 bits (168), Expect = 2e-10 Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 6/109 (5%) Frame = +2
Query: 398 SSPVSEESTLDCEISLCTGGRNHQPIIECAPSPSSAA------LTNQCSESSAAYFLWPP 559 +S SE+S LD E RNH PS SS + L Q +ES+A YF WP Sbjct: 15 ASSESEDSALDLE-------RNHHCNHLSLPSSSSPSPLQPFTLNIQHAESNAPYFSWPT 67
Query: 560 VYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 + R + + +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 68 LSRLNDTVEDRANYFGNLQKGVLPETVGRLPSGQQATTLLELMTIRAFH 116
>tr|Q8S8Q2|Q8S8Q2_ARATH Expressed protein (Putative uncharacterized protein At2g35155) OS=Arabidopsis thaliana GN=At2g35155 PE=2 SV=1 Length = 579
Score = 69.3 bits (168), Expect = 2e-10 Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 6/109 (5%) Frame = +2
Query: 398 SSPVSEESTLDCEISLCTGGRNHQPIIECAPSPSSAA------LTNQCSESSAAYFLWPP 559 +S SE+S LD E RNH PS SS + L Q +ES+A YF WP Sbjct: 15 ASSESEDSALDLE-------RNHHCNHLSLPSSSSPSPLQPFTLNIQHAESNAPYFSWPT 67
Query: 560 VYRPHGSAGERANYFQGLQKAVEFGSIERILKGPQASTLLDLMTIRAYN 706 + R + + +RANYF LQK V ++ R+ G QA+TLL+LMTIRA++ Sbjct: 68 LSRLNDTVEDRANYFGNLQKGVLPETVGRLPSGQQATTLLELMTIRAFH 116
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